RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 DEFB1P60022 68 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 ZNF345Q14585 488 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 RBMY1FQ15415 496 aaKnown RBP2.63□□□□□ -1.99
NUP88-202ENST00000570937 SPINK13Q1W4C9 94 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 AKR1C8PQ5T2L2 129 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 EIF5AL1Q6IS14 154 aaKnown RBP2.63□□□□□ -1.99
NUP88-202ENST00000570937 AMTNQ6UX39 209 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 ZNF493Q6ZR52 646 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 EXOC3-AS1Q8N2X6 119 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 RPP25LQ8N5L8 163 aaKnown RBP2.63□□□□□ -1.99
NUP88-202ENST00000570937 HSD17B11Q8NBQ5 300 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 OR2D3Q8NGH3 330 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 STOML3Q8TAV4 291 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 FXYD5Q96DB9 178 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 C16orf74Q96GX8 76 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 LINC00477Q96M19 166 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 NKX6-2Q9C056 277 aaPredicted RBP2.63□□□□□ -1.99
NUP88-202ENST00000570937 WFDC1Q9HC57 220 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 BIN3Q9NQY0 253 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 OTORQ9NRC9 128 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 TMEM167BQ9NRX6 74 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 HUWE1Q7Z6Z7 4374 aaKnown RBP2.63□□□□□ -1.99
NUP88-202ENST00000570937 TRAV12-2A0A075B6T6 113 aa2.62□□□□□ -1.99
NUP88-202ENST00000570937 DEFB131BA0A096LNP1 70 aa2.62□□□□□ -1.99
NUP88-202ENST00000570937 TRAV12-3A0A0B4J271 114 aa2.62□□□□□ -1.99
NUP88-202ENST00000570937 LCE6AA0A183 80 aa2.62□□□□□ -1.99
NUP88-202ENST00000570937 RBAKDNA6NC62 111 aa2.62□□□□□ -1.99
NUP88-202ENST00000570937 FBLL1A6NHQ2 334 aaKnown RBP2.62□□□□□ -1.99
NUP88-202ENST00000570937 LYRM9A8MSI8 78 aa2.62□□□□□ -1.99
NUP88-202ENST00000570937 IGLL5B9A064 214 aa2.62□□□□□ -1.99
NUP88-202ENST00000570937 UMAD1C9J7I0 102 aa2.62□□□□□ -1.99
NUP88-202ENST00000570937 SLC17A3O00476 420 aa2.62□□□□□ -1.99
NUP88-202ENST00000570937 ATP6V0CP27449 155 aa2.62□□□□□ -1.99
NUP88-202ENST00000570937 RNASE4P34096 147 aaKnown RBP2.62□□□□□ -1.99
NUP88-202ENST00000570937 CDC34P49427 236 aaPredicted RBP2.62□□□□□ -1.99
NUP88-202ENST00000570937 ZNF138P52744 262 aa2.62□□□□□ -1.99
NUP88-202ENST00000570937 Q5BKY6 102 aa2.62□□□□□ -1.99
NUP88-202ENST00000570937 KRTAP5-5Q701N2 237 aaPredicted RBP2.62□□□□□ -1.99
NUP88-202ENST00000570937 C1orf158Q8N1D5 194 aa2.62□□□□□ -1.99
NUP88-202ENST00000570937 EIF4E3Q8N5X7 224 aaKnown RBP2.62□□□□□ -1.99
NUP88-202ENST00000570937 C14orf178Q8N769 122 aaPredicted RBP2.62□□□□□ -1.99
NUP88-202ENST00000570937 TMEM263Q8WUH6 116 aaKnown RBP2.62□□□□□ -1.99
NUP88-202ENST00000570937 FAM210BQ96KR6 192 aa2.62□□□□□ -1.99
NUP88-202ENST00000570937 FAM167A-AS1Q96KT0 104 aa2.62□□□□□ -1.99
NUP88-202ENST00000570937 HYLS1Q96M11 299 aa2.62□□□□□ -1.99
NUP88-202ENST00000570937 NDFIP1Q9BT67 221 aa2.62□□□□□ -1.99
NUP88-202ENST00000570937 NDUFAF3Q9BU61 184 aa2.62□□□□□ -1.99
NUP88-202ENST00000570937 AGPAT4-IT1Q9H0P7 198 aa2.62□□□□□ -1.99
NUP88-202ENST00000570937 Q9H3A6 140 aa2.62□□□□□ -1.99
NUP88-202ENST00000570937 MED9Q9NWA0 146 aa2.62□□□□□ -1.99
NUP88-202ENST00000570937 ZNF492Q9P255 531 aa2.62□□□□□ -1.99
NUP88-202ENST00000570937 YTHDF2Q9Y5A9 579 aaKnown RBP2.62□□□□□ -1.99
NUP88-202ENST00000570937 TIMM8BQ9Y5J9 83 aaPredicted RBP2.62□□□□□ -1.99
NUP88-202ENST00000570937 LENEPQ9Y5L5 61 aa2.62□□□□□ -1.99
NUP88-202ENST00000570937 STAB2Q8WWQ8 2551 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 KMT2CQ8NEZ4 4911 aaKnown RBP2.61□□□□□ -1.99
NUP88-202ENST00000570937 CTXND1A0A1B0GTU2 59 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 A0A1W2PRE2 83 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 C7orf71A4D174 169 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 RNF222A6NCQ9 220 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 PGPA6NDG6 321 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 ZNF705GA8MUZ8 300 aaPredicted RBP2.61□□□□□ -1.99
NUP88-202ENST00000570937 KRBOX1C9JBD0 128 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 F6UZH7 168 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 TEX46H3BTG2 121 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 M0R3E3 92 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 TCAPO15273 167 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 CRXO43186 299 aaPredicted RBP2.61□□□□□ -1.99
NUP88-202ENST00000570937 LY6G6CO95867 125 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 IFNA7P01567 189 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 ATP5G1P05496 136 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 SEC11BP0C7V7 166 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 STAG3L2P0CL84 134 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 ARL14EPLP0DKL9 152 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 P0DMU3 169 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 FAM231AP0DMU4 169 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 FAM231CP0DMU5 169 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 DEFB130BP0DP73 79 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 DEFB130AP0DP74 79 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 CRISP2P16562 243 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 GCHFRP30047 84 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 TAGLN2P37802 199 aaKnown RBP2.61□□□□□ -1.99
NUP88-202ENST00000570937 ATP5G3P48201 142 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 PPT1P50897 306 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 RAB2AP61019 212 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 DAD1P61803 113 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 C12orf74Q32Q52 190 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 LGALSLQ3ZCW2 172 aaPredicted RBP2.61□□□□□ -1.99
NUP88-202ENST00000570937 FAM222AQ5U5X8 452 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 RPL7L1Q6DKI1 246 aaKnown RBP2.61□□□□□ -1.99
NUP88-202ENST00000570937 LGALS9CQ6DKI2 356 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 DPPA3Q6W0C5 159 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 MRPL52Q86TS9 123 aaKnown RBP2.61□□□□□ -1.99
NUP88-202ENST00000570937 BAP18Q8IXM2 172 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 KCNRGQ8N5I3 272 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 C5orf17Q8NAS9 161 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 LINC00467Q9BRT7 94 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 SH3BGRL3Q9H299 93 aa2.61□□□□□ -1.99
NUP88-202ENST00000570937 TRGV2A0A075B6R0 118 aa2.6□□□□□ -1.99
NUP88-202ENST00000570937 IGHV1OR15-1A0A075B7D0 117 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms