RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 SPANXN5Q5MJ07 72 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 C10orf55Q5SWW7 151 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 ZNF833PQ6ZTB9 187 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 TEN1Q86WV5 123 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 DYNAPQ8N1N2 210 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 OR8B3Q8NGG8 313 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 C11orf52Q96A22 123 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 ZC2HC1AQ96GY0 325 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 C18orf15Q96N68 181 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 OR8B2Q96RD0 313 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 NABP2Q9BQ15 211 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 BPESC1Q9GZL8 116 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 PARLQ9H300 379 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 RABAC1Q9UI14 185 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 HLA-DRB4X5D2U9 266 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 ZFHX3Q15911 3703 aa2.66□□□□□ -1.98
SMG6-208ENST00000570874 IGHV3OR16-10A0A075B7F0 116 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 UBE2L5PA0A1B0GUS4 154 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 ZFP92A6NM28 416 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 IGLL5B9A064 214 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 M0R378 163 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 COX7A2LO14548 114 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 ZNF73O43830 326 aaPredicted RBP2.65□□□□□ -1.99
SMG6-208ENST00000570874 SNCGO76070 127 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 FSTL3O95633 263 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 IGLV1-40P01703 118 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 IGLV2-23P01705 113 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 TCRAP04437 139 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 PRSS2P07478 247 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 SAA1P0DJI8 122 aaPredicted RBP2.65□□□□□ -1.99
SMG6-208ENST00000570874 APELAP0DMC3 54 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 IGHV4-38-2P0DP08 117 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 DEFA4P12838 97 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 IGLL1P15814 213 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 CRISP2P16562 243 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 CD24P25063 80 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 ZNF138P52744 262 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 RPL23P62829 140 aaKnown RBP2.65□□□□□ -1.99
SMG6-208ENST00000570874 SEC11AP67812 179 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 EBI3Q14213 229 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 RBMY1FQ15415 496 aaKnown RBP2.65□□□□□ -1.99
SMG6-208ENST00000570874 LGALS9BQ3B8N2 356 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 VSTM2AQ8TAG5 236 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 TMEM158Q8WZ71 300 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 SLC25A22Q9H936 323 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 ST20Q9HBF5 79 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 MOB4Q9Y3A3 225 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 TRAPPC1Q9Y5R8 145 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 CSMD1Q96PZ7 3565 aa2.65□□□□□ -1.99
SMG6-208ENST00000570874 PRRC2AP48634 2157 aaKnown RBP2.65□□□□□ -1.99
SMG6-208ENST00000570874 ACACBO00763 2458 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 IGHV1OR15-1A0A075B7D0 117 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 IGHV4-30-2A0A087WSY4 118 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 IGHV1-3A0A0C4DH29 117 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 TRBV27A0A0K0K1C4 114 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 MDFIC2A0A1B0GVS7 189 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 C9JCJ5 164 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 C11orf94C9JXX5 98 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 H3BRM9 83 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 H3BT86 120 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 K7EQD1 137 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 IGKV1D-33P01593 117 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 IGKV1-33P01594 117 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 IGLV1-47P01700 117 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 IGLC2P0DOY2 106 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 IGLC3P0DOY3 106 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 MDKP21741 143 aaPredicted RBP2.64□□□□□ -1.99
SMG6-208ENST00000570874 HINT1P49773 126 aaPredicted RBP2.64□□□□□ -1.99
SMG6-208ENST00000570874 ZNF137PP52743 207 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 EFNA4P52798 201 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 LINC00313P59037 77 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 TAS2R45P59539 299 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 KIAA0087Q14695 138 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 KIAA1644Q3SXP7 199 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 VMO1Q7Z5L0 202 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 PRNTQ86SH4 94 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 BPIFA4PQ86YQ2 179 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 PRSS3P2Q8NHM4 247 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 DCANP1Q8TF63 244 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 CCL19Q99731 98 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 TMEM243Q9BU79 118 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 CLEC7AQ9BXN2 247 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 TMEM167BQ9NRX6 74 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 HILPDAQ9Y5L2 63 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 SERP1Q9Y6X1 66 aa2.64□□□□□ -1.99
SMG6-208ENST00000570874 BAHCC1Q9P281 2608 aa2.63□□□□□ -1.99
SMG6-208ENST00000570874 TRBV20-1A0A075B6N2 111 aa2.63□□□□□ -1.99
SMG6-208ENST00000570874 TRAV9-2A0A087WT02 112 aa2.63□□□□□ -1.99
SMG6-208ENST00000570874 MUC21A0A0G2JKD1 596 aa2.63□□□□□ -1.99
SMG6-208ENST00000570874 ODF3BA8MYP8 253 aa2.63□□□□□ -1.99
SMG6-208ENST00000570874 OOSP1A8MZH6 123 aa2.63□□□□□ -1.99
SMG6-208ENST00000570874 BUB1B-PAK6H3BSN5 160 aa2.63□□□□□ -1.99
SMG6-208ENST00000570874 IGHV3-48P01763 117 aa2.63□□□□□ -1.99
SMG6-208ENST00000570874 HLA-DQA1P01909 254 aa2.63□□□□□ -1.99
SMG6-208ENST00000570874 RBP4P02753 201 aa2.63□□□□□ -1.99
SMG6-208ENST00000570874 SLC25A5P05141 298 aaKnown RBP2.63□□□□□ -1.99
SMG6-208ENST00000570874 RNASE2P10153 161 aaKnown RBP2.63□□□□□ -1.99
SMG6-208ENST00000570874 ZNF80P51504 273 aaPredicted RBP2.63□□□□□ -1.99
SMG6-208ENST00000570874 HBBP68871 147 aa2.63□□□□□ -1.99
SMG6-208ENST00000570874 MRPS36P82909 103 aaKnown RBP2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms