RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 ANAPC10Q9UM13 185 aa2.04□□□□□ -2.08
CNOT1-221ENST00000569924 CELA1Q9UNI1 258 aa2.04□□□□□ -2.08
CNOT1-221ENST00000569924 CARHSP1Q9Y2V2 147 aaKnown RBP2.04□□□□□ -2.08
CNOT1-221ENST00000569924 TRAV30A0A087WSZ9 112 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 A0A1B0GV50 99 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 KNCNA6PVL3 124 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 ZNF705FA8MVS1 300 aaPredicted RBP2.03□□□□□ -2.08
CNOT1-221ENST00000569924 H3BMM0 161 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 M0R2N4 97 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 OR7C2O60412 319 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 IFNA21P01568 189 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 IFNA17P01571 189 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 IGKV1-17P01599 117 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 ZNF705DP0CH99 300 aaPredicted RBP2.03□□□□□ -2.08
CNOT1-221ENST00000569924 ZNF705BP0CI00 300 aaPredicted RBP2.03□□□□□ -2.08
CNOT1-221ENST00000569924 SPART-AS1P0CW21 52 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 HLA-DRB4P13762 266 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 S100GP29377 79 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 SDC2P34741 201 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 SNCAP37840 140 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 EIF2B2P49770 351 aaKnown RBP2.03□□□□□ -2.08
CNOT1-221ENST00000569924 GABARAPL2P60520 117 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 SNRPD3P62318 126 aaKnown RBP2.03□□□□□ -2.08
CNOT1-221ENST00000569924 HERVK_113P63121 156 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 DHRS2Q13268 280 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 PMAIP1Q13794 54 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 C1orf134Q5TEV5 83 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 Q5W150 140 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 FAM104BQ5XKR9 115 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 EBLN2Q6P2I7 272 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 ZNF705AQ6ZN79 300 aaPredicted RBP2.03□□□□□ -2.08
CNOT1-221ENST00000569924 ZNF767PQ75MW2 155 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 UBE2DNLQ8IWF7 75 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 OR5H6Q8NGV6 325 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 OR4X1Q8NH49 305 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 BTF3L4Q96K17 158 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 SIGMAR1Q99720 223 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 SCRT1Q9BWW7 348 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 FXYD6Q9H0Q3 95 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 MED28Q9H204 178 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 ZNF331Q9NQX6 463 aaPredicted RBP2.03□□□□□ -2.08
CNOT1-221ENST00000569924 DOK5Q9P104 306 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 ZNF492Q9P255 531 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 SSR3Q9UNL2 185 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 RFNGQ9Y644 331 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 HLA-DRB4X5D2U9 266 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 NACAE9PAV3 2078 aa2.03□□□□□ -2.08
CNOT1-221ENST00000569924 IGLV2-18A0A075B6J9 118 aa2.02□□□□□ -2.09
CNOT1-221ENST00000569924 C16orf90A8MZG2 172 aa2.02□□□□□ -2.09
CNOT1-221ENST00000569924 GSTZ1O43708 216 aaPredicted RBP2.02□□□□□ -2.09
CNOT1-221ENST00000569924 ATG12O94817 140 aa2.02□□□□□ -2.09
CNOT1-221ENST00000569924 IGKV1-5P01602 117 aa2.02□□□□□ -2.09
CNOT1-221ENST00000569924 PMP2P02689 132 aa2.02□□□□□ -2.09
CNOT1-221ENST00000569924 OR5AC1P0C628 307 aa2.02□□□□□ -2.09
CNOT1-221ENST00000569924 RNASE2P10153 161 aaKnown RBP2.02□□□□□ -2.09
CNOT1-221ENST00000569924 S100A2P29034 98 aa2.02□□□□□ -2.09
CNOT1-221ENST00000569924 TAS2R20P59543 309 aa2.02□□□□□ -2.09
CNOT1-221ENST00000569924 YPEL3P61236 119 aaPredicted RBP2.02□□□□□ -2.09
CNOT1-221ENST00000569924 PSMG4Q5JS54 123 aa2.02□□□□□ -2.09
CNOT1-221ENST00000569924 C1orf194Q5T5A4 169 aa2.02□□□□□ -2.09
CNOT1-221ENST00000569924 CYB561D1Q8N8Q1 229 aa2.02□□□□□ -2.09
CNOT1-221ENST00000569924 C15orf53Q8NAA6 179 aa2.02□□□□□ -2.09
CNOT1-221ENST00000569924 ZNF680Q8NEM1 530 aa2.02□□□□□ -2.09
CNOT1-221ENST00000569924 S100A16Q96FQ6 103 aaKnown RBP2.02□□□□□ -2.09
CNOT1-221ENST00000569924 SFRP2Q96HF1 295 aa2.02□□□□□ -2.09
CNOT1-221ENST00000569924 SHANK2-AS3Q9BTD1 123 aa2.02□□□□□ -2.09
CNOT1-221ENST00000569924 KRTAP1-5Q9BYS1 174 aa2.02□□□□□ -2.09
CNOT1-221ENST00000569924 ENY2Q9NPA8 101 aa2.02□□□□□ -2.09
CNOT1-221ENST00000569924 MRPL36Q9P0J6 103 aaKnown RBP2.02□□□□□ -2.09
CNOT1-221ENST00000569924 VPS13BQ7Z7G8 4022 aa2.02□□□□□ -2.09
CNOT1-221ENST00000569924 IGLV4-69A0A075B6H9 119 aa2.01□□□□□ -2.09
CNOT1-221ENST00000569924 NBDYA0A0U1RRE5 68 aa2.01□□□□□ -2.09
CNOT1-221ENST00000569924 MEIS3P1A6NDR6 274 aa2.01□□□□□ -2.09
CNOT1-221ENST00000569924 A8MTW9 85 aa2.01□□□□□ -2.09
CNOT1-221ENST00000569924 M0R381 172 aa2.01□□□□□ -2.09
CNOT1-221ENST00000569924 CCNKO75909 580 aa2.01□□□□□ -2.09
CNOT1-221ENST00000569924 LINC00869P0C866 280 aa2.01□□□□□ -2.09
CNOT1-221ENST00000569924 IGLC1P0CG04 106 aa2.01□□□□□ -2.09
CNOT1-221ENST00000569924 SLC25A4P12235 298 aa2.01□□□□□ -2.09
CNOT1-221ENST00000569924 NTF3P20783 257 aa2.01□□□□□ -2.09
CNOT1-221ENST00000569924 OR10J1P30954 320 aa2.01□□□□□ -2.09
CNOT1-221ENST00000569924 TGFBR1P36897 503 aa2.01□□□□□ -2.09
CNOT1-221ENST00000569924 EMP1P54849 157 aa2.01□□□□□ -2.09
CNOT1-221ENST00000569924 LINC00313P59037 77 aa2.01□□□□□ -2.09
CNOT1-221ENST00000569924 C2orf83Q53S99 150 aa2.01□□□□□ -2.09
CNOT1-221ENST00000569924 SPINK9Q5DT21 86 aa2.01□□□□□ -2.09
CNOT1-221ENST00000569924 TMEM69Q5SWH9 247 aa2.01□□□□□ -2.09
CNOT1-221ENST00000569924 SAMD13Q5VXD3 122 aa2.01□□□□□ -2.09
CNOT1-221ENST00000569924 PRSS54Q6PEW0 395 aa2.01□□□□□ -2.09
CNOT1-221ENST00000569924 IZUMO2Q6UXV1 221 aa2.01□□□□□ -2.09
CNOT1-221ENST00000569924 FOXI2Q6ZQN5 318 aa2.01□□□□□ -2.09
CNOT1-221ENST00000569924 ZNF709Q8N972 641 aa2.01□□□□□ -2.09
CNOT1-221ENST00000569924 FER1L6-AS1Q8NA97 138 aa2.01□□□□□ -2.09
CNOT1-221ENST00000569924 BORCS7Q96B45 105 aa2.01□□□□□ -2.09
CNOT1-221ENST00000569924 CNBD2Q96M20 576 aa2.01□□□□□ -2.09
CNOT1-221ENST00000569924 PDCD10Q9BUL8 212 aa2.01□□□□□ -2.09
CNOT1-221ENST00000569924 CACFD1Q9UGQ2 172 aa2.01□□□□□ -2.09
CNOT1-221ENST00000569924 C3orf85A0A1B0GTC6 90 aa2□□□□□ -2.09
CNOT1-221ENST00000569924 K7ERS5 55 aa2□□□□□ -2.09
CNOT1-221ENST00000569924 IL4P05112 153 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms