RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 GATA2P23769 480 aaPredicted RBP5.07□□□□□ -1.6
SMG1-217ENST00000569764 TRAV8-1A0A0A6YYK1 113 aa5.07□□□□□ -1.6
SMG1-217ENST00000569764 LYZL2Q7Z4W2 148 aa5.07□□□□□ -1.6
SMG1-217ENST00000569764 ZNF491Q8N8L2 437 aa5.07□□□□□ -1.6
SMG1-217ENST00000569764 WI2-2373I1.2A0A1W2PRP0 233 aa5.07□□□□□ -1.6
SMG1-217ENST00000569764 ZNF818PQ6ZRF7 136 aa5.07□□□□□ -1.6
SMG1-217ENST00000569764 MAPKAPK5-AS1Q8N8E1 139 aa5.07□□□□□ -1.6
SMG1-217ENST00000569764 OR8A1Q8NGG7 326 aa5.07□□□□□ -1.6
SMG1-217ENST00000569764 PPDPFLQ8WWR9 84 aa5.07□□□□□ -1.6
SMG1-217ENST00000569764 Q9HAA7 133 aa5.07□□□□□ -1.6
SMG1-217ENST00000569764 RPRMQ9NS64 109 aa5.07□□□□□ -1.6
SMG1-217ENST00000569764 TRAV9-1A0A075B6T8 112 aa5.06□□□□□ -1.6
SMG1-217ENST00000569764 A8MWL6 223 aa5.06□□□□□ -1.6
SMG1-217ENST00000569764 NDUFC2-KCTD14E9PQ53 114 aa5.06□□□□□ -1.6
SMG1-217ENST00000569764 UBE2G1P62253 170 aa5.06□□□□□ -1.6
SMG1-217ENST00000569764 LINC00526Q96FQ7 95 aa5.06□□□□□ -1.6
SMG1-217ENST00000569764 CYTL1Q9NRR1 136 aa5.06□□□□□ -1.6
SMG1-217ENST00000569764 MAST4O15021 2626 aa5.06□□□□□ -1.6
SMG1-217ENST00000569764 C11orf94C9JXX5 98 aa5.06□□□□□ -1.6
SMG1-217ENST00000569764 LGALS9O00182 355 aa5.06□□□□□ -1.6
SMG1-217ENST00000569764 NXPH3O95157 252 aa5.06□□□□□ -1.6
SMG1-217ENST00000569764 LHBP01229 141 aa5.06□□□□□ -1.6
SMG1-217ENST00000569764 IGHG2P01859 326 aa5.06□□□□□ -1.6
SMG1-217ENST00000569764 LGALS3P17931 250 aaKnown RBP5.06□□□□□ -1.6
SMG1-217ENST00000569764 IGKV1D-17A0A075B6S4 117 aa5.06□□□□□ -1.6
SMG1-217ENST00000569764 A0A0G2JRQ6 117 aa5.06□□□□□ -1.6
SMG1-217ENST00000569764 IGLL1P15814 213 aa5.06□□□□□ -1.6
SMG1-217ENST00000569764 PSMB2P49721 201 aa5.06□□□□□ -1.6
SMG1-217ENST00000569764 ZNF329Q86UD4 541 aa5.06□□□□□ -1.6
SMG1-217ENST00000569764 C17orf77Q96MU5 243 aa5.06□□□□□ -1.6
SMG1-217ENST00000569764 SMIM7Q9BQ49 75 aa5.06□□□□□ -1.6
SMG1-217ENST00000569764 AGPAT4-IT1Q9H0P7 198 aa5.06□□□□□ -1.6
SMG1-217ENST00000569764 FBN2P35556 2912 aa5.06□□□□□ -1.6
SMG1-217ENST00000569764 SETXQ7Z333 2677 aaKnown RBP5.06□□□□□ -1.6
SMG1-217ENST00000569764 TANC2Q9HCD6 1990 aa5.05□□□□□ -1.6
SMG1-217ENST00000569764 CST7O76096 145 aa5.05□□□□□ -1.6
SMG1-217ENST00000569764 PPYP01298 95 aa5.05□□□□□ -1.6
SMG1-217ENST00000569764 CBLN1P23435 193 aa5.05□□□□□ -1.6
SMG1-217ENST00000569764 HERVK_113P61574 105 aa5.05□□□□□ -1.6
SMG1-217ENST00000569764 PCP2Q8IVA1 136 aa5.05□□□□□ -1.6
SMG1-217ENST00000569764 CENPEQ02224 2701 aa5.05□□□□□ -1.6
SMG1-217ENST00000569764 TET2Q6N021 2002 aaPredicted RBP5.05□□□□□ -1.6
SMG1-217ENST00000569764 HCFC1P51610 2035 aa5.05□□□□□ -1.6
SMG1-217ENST00000569764 hADV29S1A0JD25 119 aa5.05□□□□□ -1.6
SMG1-217ENST00000569764 TMEM256-PLSCR3K7ERE1 68 aa5.05□□□□□ -1.6
SMG1-217ENST00000569764 IGHV3-11P01762 117 aa5.05□□□□□ -1.6
SMG1-217ENST00000569764 SRP19P09132 144 aaKnown RBP5.05□□□□□ -1.6
SMG1-217ENST00000569764 LINC00869P0C866 280 aa5.05□□□□□ -1.6
SMG1-217ENST00000569764 C3orf79P0CE67 100 aa5.05□□□□□ -1.6
SMG1-217ENST00000569764 NPC2P61916 151 aa5.05□□□□□ -1.6
SMG1-217ENST00000569764 DPH3P1Q9H4G8 78 aa5.05□□□□□ -1.6
SMG1-217ENST00000569764 CCL28Q9NRJ3 127 aa5.05□□□□□ -1.6
SMG1-217ENST00000569764 C12orf77C9JDV5 145 aa5.05□□□□□ -1.6
SMG1-217ENST00000569764 HLA-DQA1P01909 254 aa5.05□□□□□ -1.6
SMG1-217ENST00000569764 ZNF688P0C7X2 276 aa5.05□□□□□ -1.6
SMG1-217ENST00000569764 CD177Q8N6Q3 437 aa5.05□□□□□ -1.6
SMG1-217ENST00000569764 C2orf50Q96LR7 162 aa5.05□□□□□ -1.6
SMG1-217ENST00000569764 SPANXDQ9BXN6 97 aa5.05□□□□□ -1.6
SMG1-217ENST00000569764 LOC100131303A0A0U1RQF7 123 aa5.05□□□□□ -1.6
SMG1-217ENST00000569764 ZNF737O75373 536 aa5.05□□□□□ -1.6
SMG1-217ENST00000569764 PLA2G1BP04054 148 aaKnown RBP5.05□□□□□ -1.6
SMG1-217ENST00000569764 BRWD1-AS2P59051 145 aa5.05□□□□□ -1.6
SMG1-217ENST00000569764 SS18Q15532 418 aa5.05□□□□□ -1.6
SMG1-217ENST00000569764 C1orf229Q6ZS94 237 aaPredicted RBP5.05□□□□□ -1.6
SMG1-217ENST00000569764 TMEM167AQ8TBQ9 72 aa5.05□□□□□ -1.6
SMG1-217ENST00000569764 TMEM190Q8WZ59 177 aa5.05□□□□□ -1.6
SMG1-217ENST00000569764 TRBV6-7A0A0A0MS04 114 aa5.04□□□□□ -1.6
SMG1-217ENST00000569764 LOC389332A0A1B0GUA5 103 aa5.04□□□□□ -1.6
SMG1-217ENST00000569764 IGKV1-39P01597 117 aa5.04□□□□□ -1.6
SMG1-217ENST00000569764 IGKV1D-39P04432 117 aa5.04□□□□□ -1.6
SMG1-217ENST00000569764 MP68P56378 58 aa5.04□□□□□ -1.6
SMG1-217ENST00000569764 C6orf99Q4VX62 202 aa5.04□□□□□ -1.6
SMG1-217ENST00000569764 MIC13Q5XKP0 118 aa5.04□□□□□ -1.6
SMG1-217ENST00000569764 RMI2Q96E14 147 aa5.04□□□□□ -1.6
SMG1-217ENST00000569764 ARHGAP32A7KAX9 2087 aa5.04□□□□□ -1.6
SMG1-217ENST00000569764 LY6LH3BQJ8 138 aa5.04□□□□□ -1.6
SMG1-217ENST00000569764 PROK1P58294 105 aa5.04□□□□□ -1.6
SMG1-217ENST00000569764 RBM3P98179 157 aaKnown RBP5.04□□□□□ -1.6
SMG1-217ENST00000569764 ZNF497Q6ZNH5 498 aa5.04□□□□□ -1.6
SMG1-217ENST00000569764 PGLYRP4Q96LB8 373 aa5.04□□□□□ -1.6
SMG1-217ENST00000569764 ZNF580Q9UK33 172 aa5.04□□□□□ -1.6
SMG1-217ENST00000569764 COX7A2P2O60397 106 aa5.04□□□□□ -1.6
SMG1-217ENST00000569764 AVPP01185 164 aa5.04□□□□□ -1.6
SMG1-217ENST00000569764 ASIPP42127 132 aa5.04□□□□□ -1.6
SMG1-217ENST00000569764 TWIST1Q15672 202 aa5.04□□□□□ -1.6
SMG1-217ENST00000569764 Q6ZRM9 215 aa5.04□□□□□ -1.6
SMG1-217ENST00000569764 ATP6V0E2Q8NHE4 81 aa5.04□□□□□ -1.6
SMG1-217ENST00000569764 NMES1Q9C002 83 aa5.04□□□□□ -1.6
SMG1-217ENST00000569764 TIMM9Q9Y5J7 89 aa5.04□□□□□ -1.6
SMG1-217ENST00000569764 PROP1O75360 226 aa5.03□□□□□ -1.6
SMG1-217ENST00000569764 IGHV3-7P01780 117 aa5.03□□□□□ -1.6
SMG1-217ENST00000569764 MGST1P10620 155 aaKnown RBP5.03□□□□□ -1.6
SMG1-217ENST00000569764 Q6ZS49 121 aa5.03□□□□□ -1.6
SMG1-217ENST00000569764 MAP6D1Q9H9H5 199 aa5.03□□□□□ -1.6
SMG1-217ENST00000569764 CTSZQ9UBR2 303 aa5.03□□□□□ -1.6
SMG1-217ENST00000569764 LYSTQ99698 3801 aa5.03□□□□□ -1.6
SMG1-217ENST00000569764 A0A1W2PPR1 153 aa5.03□□□□□ -1.6
SMG1-217ENST00000569764 PITX3O75364 302 aa5.03□□□□□ -1.6
SMG1-217ENST00000569764 Q0VG73 95 aa5.03□□□□□ -1.6
SMG1-217ENST00000569764 KTN1-AS1Q86SY8 53 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms