RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 ZC2HC1AQ96GY0 325 aa6.36□□□□□ -1.39
CAPN3-219ENST00000569136 ZNF479Q96JC4 524 aa6.36□□□□□ -1.39
CAPN3-219ENST00000569136 UPK3BQ9BT76 320 aa6.36□□□□□ -1.39
CAPN3-219ENST00000569136 BIN3Q9NQY0 253 aa6.36□□□□□ -1.39
CAPN3-219ENST00000569136 IL36BQ9NZH7 164 aa6.36□□□□□ -1.39
CAPN3-219ENST00000569136 A0A096LPF7 62 aa6.35□□□□□ -1.39
CAPN3-219ENST00000569136 A8MWV9 139 aa6.35□□□□□ -1.39
CAPN3-219ENST00000569136 SH2D1AO60880 128 aa6.35□□□□□ -1.39
CAPN3-219ENST00000569136 RNASE3P12724 160 aaKnown RBP6.35□□□□□ -1.39
CAPN3-219ENST00000569136 RPL35P42766 123 aaKnown RBP6.35□□□□□ -1.39
CAPN3-219ENST00000569136 ZFP2Q6ZN57 461 aa6.35□□□□□ -1.39
CAPN3-219ENST00000569136 ZNRF2Q8NHG8 242 aa6.35□□□□□ -1.39
CAPN3-219ENST00000569136 C11orf52Q96A22 123 aa6.35□□□□□ -1.39
CAPN3-219ENST00000569136 SMIM12Q96EX1 92 aa6.35□□□□□ -1.39
CAPN3-219ENST00000569136 PRADC1Q9BSG0 188 aa6.35□□□□□ -1.39
CAPN3-219ENST00000569136 VAX2Q9UIW0 290 aa6.35□□□□□ -1.39
CAPN3-219ENST00000569136 MRPS16Q9Y3D3 137 aaKnown RBP6.35□□□□□ -1.39
CAPN3-219ENST00000569136 HYDINQ4G0P3 5121 aa6.34□□□□□ -1.39
CAPN3-219ENST00000569136 IGLV2-18A0A075B6J9 118 aa6.34□□□□□ -1.39
CAPN3-219ENST00000569136 NBDYA0A0U1RRE5 68 aa6.34□□□□□ -1.39
CAPN3-219ENST00000569136 TRBV6-4A0A1B0GX49 114 aa6.34□□□□□ -1.39
CAPN3-219ENST00000569136 A0A1W2PPQ1 181 aa6.34□□□□□ -1.39
CAPN3-219ENST00000569136 M0R2N4 97 aa6.34□□□□□ -1.39
CAPN3-219ENST00000569136 CXCL1P09341 107 aa6.34□□□□□ -1.39
CAPN3-219ENST00000569136 SFTA3P0C7M3 94 aa6.34□□□□□ -1.39
CAPN3-219ENST00000569136 ARMS2P0C7Q2 107 aa6.34□□□□□ -1.39
CAPN3-219ENST00000569136 BCL2P10415 239 aa6.34□□□□□ -1.39
CAPN3-219ENST00000569136 GATA1P15976 413 aaPredicted RBP6.34□□□□□ -1.39
CAPN3-219ENST00000569136 SRIP30626 198 aa6.34□□□□□ -1.39
CAPN3-219ENST00000569136 MEF2BQ02080 365 aaPredicted RBP6.34□□□□□ -1.39
CAPN3-219ENST00000569136 TTC32Q5I0X7 151 aa6.34□□□□□ -1.39
CAPN3-219ENST00000569136 C1orf134Q5TEV5 83 aa6.34□□□□□ -1.39
CAPN3-219ENST00000569136 CFAP126Q5VTH2 177 aa6.34□□□□□ -1.39
CAPN3-219ENST00000569136 LYPD5Q6UWN5 251 aa6.34□□□□□ -1.39
CAPN3-219ENST00000569136 MED9Q9NWA0 146 aa6.34□□□□□ -1.39
CAPN3-219ENST00000569136 PHLDA3Q9Y5J5 127 aa6.34□□□□□ -1.39
CAPN3-219ENST00000569136 TRAV9-2A0A087WT02 112 aa6.33□□□□□ -1.4
CAPN3-219ENST00000569136 PGPEP1LA6NFU8 196 aa6.33□□□□□ -1.4
CAPN3-219ENST00000569136 K7EP13 123 aa6.33□□□□□ -1.4
CAPN3-219ENST00000569136 K7EQD1 137 aa6.33□□□□□ -1.4
CAPN3-219ENST00000569136 MGST1P10620 155 aaKnown RBP6.33□□□□□ -1.4
CAPN3-219ENST00000569136 ZNF506Q5JVG8 444 aa6.33□□□□□ -1.4
CAPN3-219ENST00000569136 SCRT2Q9NQ03 307 aa6.33□□□□□ -1.4
CAPN3-219ENST00000569136 DNAH6Q9C0G6 4158 aa6.32□□□□□ -1.4
CAPN3-219ENST00000569136 M0R036 132 aa6.32□□□□□ -1.4
CAPN3-219ENST00000569136 RHODO00212 210 aa6.32□□□□□ -1.4
CAPN3-219ENST00000569136 NDUFS6O75380 124 aaKnown RBP6.32□□□□□ -1.4
CAPN3-219ENST00000569136 GNG4P50150 75 aa6.32□□□□□ -1.4
CAPN3-219ENST00000569136 RPS20P60866 119 aaKnown RBP6.32□□□□□ -1.4
CAPN3-219ENST00000569136 RHOHQ15669 191 aa6.32□□□□□ -1.4
CAPN3-219ENST00000569136 ALKAL2Q6UX46 152 aa6.32□□□□□ -1.4
CAPN3-219ENST00000569136 ZNF575Q86XF7 245 aa6.32□□□□□ -1.4
CAPN3-219ENST00000569136 SLC25A29Q8N8R3 303 aa6.32□□□□□ -1.4
CAPN3-219ENST00000569136 LYPD6BQ8NI32 183 aa6.32□□□□□ -1.4
CAPN3-219ENST00000569136 XKRY2A2RUG3 117 aa6.31□□□□□ -1.4
CAPN3-219ENST00000569136 GRIFINA4D1Z8 144 aa6.31□□□□□ -1.4
CAPN3-219ENST00000569136 SIVA1O15304 175 aa6.31□□□□□ -1.4
CAPN3-219ENST00000569136 ZFP82Q8N141 532 aa6.31□□□□□ -1.4
CAPN3-219ENST00000569136 NHLRC2Q8NBF2 726 aa6.31□□□□□ -1.4
CAPN3-219ENST00000569136 TMSB15BA0A087X1C1 80 aa6.3□□□□□ -1.4
CAPN3-219ENST00000569136 RAB19A4D1S5 217 aa6.3□□□□□ -1.4
CAPN3-219ENST00000569136 RBFOX3A6NFN3 312 aa6.3□□□□□ -1.4
CAPN3-219ENST00000569136 TMEM250H0YL14 139 aa6.3□□□□□ -1.4
CAPN3-219ENST00000569136 H3BVH4 76 aa6.3□□□□□ -1.4
CAPN3-219ENST00000569136 RTL8CO15255 209 aa6.3□□□□□ -1.4
CAPN3-219ENST00000569136 NXPH4O95158 308 aa6.3□□□□□ -1.4
CAPN3-219ENST00000569136 OR5AL1P0C617 328 aa6.3□□□□□ -1.4
CAPN3-219ENST00000569136 CENPWQ5EE01 88 aa6.3□□□□□ -1.4
CAPN3-219ENST00000569136 UFSP1Q6NVU6 142 aa6.3□□□□□ -1.4
CAPN3-219ENST00000569136 C6orf223Q8N319 242 aa6.3□□□□□ -1.4
CAPN3-219ENST00000569136 SFRP2Q96HF1 295 aa6.3□□□□□ -1.4
CAPN3-219ENST00000569136 PARLQ9H300 379 aa6.3□□□□□ -1.4
CAPN3-219ENST00000569136 NACAE9PAV3 2078 aa6.3□□□□□ -1.4
CAPN3-219ENST00000569136 IGHV3-73A0A0B4J1V6 119 aa6.29□□□□□ -1.4
CAPN3-219ENST00000569136 F2Z2F3 143 aa6.29□□□□□ -1.4
CAPN3-219ENST00000569136 P01737 135 aa6.29□□□□□ -1.4
CAPN3-219ENST00000569136 NKX2-5P52952 324 aaPredicted RBP6.29□□□□□ -1.4
CAPN3-219ENST00000569136 PRR27Q6MZM9 219 aa6.29□□□□□ -1.4
CAPN3-219ENST00000569136 DERL1Q9BUN8 251 aa6.29□□□□□ -1.4
CAPN3-219ENST00000569136 TRAV8-6A0A0B4J262 113 aa6.28□□□□□ -1.4
CAPN3-219ENST00000569136 TRBV10-1A0A0K0K1A3 114 aa6.28□□□□□ -1.4
CAPN3-219ENST00000569136 M0R381 172 aa6.28□□□□□ -1.4
CAPN3-219ENST00000569136 SNAI2O43623 268 aa6.28□□□□□ -1.4
CAPN3-219ENST00000569136 IGLV2-8P01709 118 aa6.28□□□□□ -1.4
CAPN3-219ENST00000569136 CRYGDP07320 174 aa6.28□□□□□ -1.4
CAPN3-219ENST00000569136 EVI2AP22794 236 aa6.28□□□□□ -1.4
CAPN3-219ENST00000569136 SPANXN1Q5VSR9 72 aa6.28□□□□□ -1.4
CAPN3-219ENST00000569136 WDR73Q6P4I2 378 aa6.28□□□□□ -1.4
CAPN3-219ENST00000569136 NFE4Q86UQ8 179 aa6.28□□□□□ -1.4
CAPN3-219ENST00000569136 OR2D3Q8NGH3 330 aa6.28□□□□□ -1.4
CAPN3-219ENST00000569136 ATP6V0E2Q8NHE4 81 aa6.28□□□□□ -1.4
CAPN3-219ENST00000569136 NTN5Q8WTR8 489 aaPredicted RBP6.28□□□□□ -1.4
CAPN3-219ENST00000569136 EIF5A2Q9GZV4 153 aaKnown RBP6.28□□□□□ -1.4
CAPN3-219ENST00000569136 GTSF1LQ9H1H1 148 aa6.28□□□□□ -1.4
CAPN3-219ENST00000569136 DNAH10Q8IVF4 4471 aa6.28□□□□□ -1.4
CAPN3-219ENST00000569136 A0A087WWC5 75 aa6.27□□□□□ -1.41
CAPN3-219ENST00000569136 C19orf71A6NCJ1 209 aa6.27□□□□□ -1.41
CAPN3-219ENST00000569136 RAB4BP61018 213 aa6.27□□□□□ -1.41
CAPN3-219ENST00000569136 CACNG7P62955 275 aa6.27□□□□□ -1.41
CAPN3-219ENST00000569136 SLC7A5P1Q8MH63 180 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms