RNA–Protein interactions for RNA: ENST00000568896.1

SYNGR3-205, Transcript of synaptogyrin 3, humanhuman

TSL 5

Gene SYNGR3, Length 533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-205ENST00000568896 SSBP4Q9BWG4 385 aaPredicted RBP12.6□□□□□ -0.39
SYNGR3-205ENST00000568896 K7EN84 100 aa12.59□□□□□ -0.39
SYNGR3-205ENST00000568896 P01737 135 aa12.59□□□□□ -0.39
SYNGR3-205ENST00000568896 OR5AL1P0C617 328 aa12.59□□□□□ -0.39
SYNGR3-205ENST00000568896 RHOHQ15669 191 aa12.59□□□□□ -0.39
SYNGR3-205ENST00000568896 SOHLH1Q5JUK2 328 aa12.59□□□□□ -0.39
SYNGR3-205ENST00000568896 NEGR1Q7Z3B1 354 aa12.59□□□□□ -0.39
SYNGR3-205ENST00000568896 OCC1Q8TAD7 63 aa12.59□□□□□ -0.39
SYNGR3-205ENST00000568896 SFRP2Q96HF1 295 aa12.59□□□□□ -0.39
SYNGR3-205ENST00000568896 RHODO00212 210 aa12.58□□□□□ -0.4
SYNGR3-205ENST00000568896 SRP19P09132 144 aaKnown RBP12.58□□□□□ -0.4
SYNGR3-205ENST00000568896 GZMBP10144 247 aa12.58□□□□□ -0.4
SYNGR3-205ENST00000568896 RPS20P60866 119 aaKnown RBP12.58□□□□□ -0.4
SYNGR3-205ENST00000568896 Q6ZSN1 163 aa12.58□□□□□ -0.4
SYNGR3-205ENST00000568896 PRADC1Q9BSG0 188 aa12.58□□□□□ -0.4
SYNGR3-205ENST00000568896 DNAH5Q8TE73 4624 aa12.58□□□□□ -0.4
SYNGR3-205ENST00000568896 FAM74A4Q5TZK3 123 aa12.57□□□□□ -0.4
SYNGR3-205ENST00000568896 LYPD5Q6UWN5 251 aa12.57□□□□□ -0.4
SYNGR3-205ENST00000568896 NUDT10Q8NFP7 164 aa12.57□□□□□ -0.4
SYNGR3-205ENST00000568896 NUDT11Q96G61 164 aa12.57□□□□□ -0.4
SYNGR3-205ENST00000568896 Q9H8V8 135 aa12.57□□□□□ -0.4
SYNGR3-205ENST00000568896 A0A087WWL8 130 aa12.56□□□□□ -0.4
SYNGR3-205ENST00000568896 MUC21A0A0G2JKD1 596 aa12.56□□□□□ -0.4
SYNGR3-205ENST00000568896 NBDYA0A0U1RRE5 68 aa12.56□□□□□ -0.4
SYNGR3-205ENST00000568896 MUC21A0A140T8X8 626 aa12.56□□□□□ -0.4
SYNGR3-205ENST00000568896 CRYGDP07320 174 aa12.56□□□□□ -0.4
SYNGR3-205ENST00000568896 IGLC6P0CF74 106 aa12.56□□□□□ -0.4
SYNGR3-205ENST00000568896 TNP2Q05952 138 aa12.56□□□□□ -0.4
SYNGR3-205ENST00000568896 FER1L6-AS1Q8NA97 138 aa12.56□□□□□ -0.4
SYNGR3-205ENST00000568896 SMIM7Q9BQ49 75 aa12.56□□□□□ -0.4
SYNGR3-205ENST00000568896 RNASE7Q9H1E1 156 aaKnown RBP12.56□□□□□ -0.4
SYNGR3-205ENST00000568896 XKRY2A2RUG3 117 aa12.55□□□□□ -0.4
SYNGR3-205ENST00000568896 SPANXN1Q5VSR9 72 aa12.55□□□□□ -0.4
SYNGR3-205ENST00000568896 SH2D6Q7Z4S9 175 aa12.54□□□□□ -0.4
SYNGR3-205ENST00000568896 TPPP3Q9BW30 176 aa12.54□□□□□ -0.4
SYNGR3-205ENST00000568896 RPP21Q9H633 154 aaKnown RBP12.54□□□□□ -0.4
SYNGR3-205ENST00000568896 LY96Q9Y6Y9 160 aa12.54□□□□□ -0.4
SYNGR3-205ENST00000568896 ZNF727A8MUV8 499 aa12.53□□□□□ -0.4
SYNGR3-205ENST00000568896 SSTP61278 116 aa12.53□□□□□ -0.4
SYNGR3-205ENST00000568896 SRSF3P84103 164 aaKnown RBP12.53□□□□□ -0.4
SYNGR3-205ENST00000568896 C14orf178Q8N769 122 aaPredicted RBP12.53□□□□□ -0.4
SYNGR3-205ENST00000568896 C16orf90A8MZG2 172 aa12.52□□□□□ -0.41
SYNGR3-205ENST00000568896 C9JQL5 133 aa12.52□□□□□ -0.41
SYNGR3-205ENST00000568896 Q9UF83 564 aa12.52□□□□□ -0.41
SYNGR3-205ENST00000568896 SIVA1O15304 175 aa12.51□□□□□ -0.41
SYNGR3-205ENST00000568896 LINC00694P0DN24 101 aa12.51□□□□□ -0.41
SYNGR3-205ENST00000568896 TIRAPP58753 221 aa12.51□□□□□ -0.41
SYNGR3-205ENST00000568896 FAM231DQ6ZW35 169 aa12.51□□□□□ -0.41
SYNGR3-205ENST00000568896 LINC01551Q86U37 167 aa12.51□□□□□ -0.41
SYNGR3-205ENST00000568896 KRTAP1-5Q9BYS1 174 aa12.51□□□□□ -0.41
SYNGR3-205ENST00000568896 A0A1W2PPQ1 181 aa12.5□□□□□ -0.41
SYNGR3-205ENST00000568896 GAGE12JA6NER3 117 aa12.5□□□□□ -0.41
SYNGR3-205ENST00000568896 F2Z2F3 143 aa12.5□□□□□ -0.41
SYNGR3-205ENST00000568896 GAGE1Q13065 139 aa12.5□□□□□ -0.41
SYNGR3-205ENST00000568896 GAGE4Q13068 117 aa12.5□□□□□ -0.41
SYNGR3-205ENST00000568896 GAGE5Q13069 117 aa12.5□□□□□ -0.41
SYNGR3-205ENST00000568896 PEA15Q15121 130 aa12.5□□□□□ -0.41
SYNGR3-205ENST00000568896 GAGE13Q4V321 117 aa12.5□□□□□ -0.41
SYNGR3-205ENST00000568896 TTC32Q5I0X7 151 aa12.5□□□□□ -0.41
SYNGR3-205ENST00000568896 LYZL1Q6UWQ5 148 aa12.5□□□□□ -0.41
SYNGR3-205ENST00000568896 AP1S3Q96PC3 154 aa12.5□□□□□ -0.41
SYNGR3-205ENST00000568896 GATCO43716 136 aaKnown RBP12.49□□□□□ -0.41
SYNGR3-205ENST00000568896 CTRLP40313 264 aa12.49□□□□□ -0.41
SYNGR3-205ENST00000568896 CACNG7P62955 275 aa12.49□□□□□ -0.41
SYNGR3-205ENST00000568896 WFDC10BQ8IUB3 73 aa12.49□□□□□ -0.41
SYNGR3-205ENST00000568896 ATP6V0E2Q8NHE4 81 aa12.49□□□□□ -0.41
SYNGR3-205ENST00000568896 MSRB1Q9NZV6 116 aa12.49□□□□□ -0.41
SYNGR3-205ENST00000568896 ERVFC1-1P60608 527 aa12.48□□□□□ -0.41
SYNGR3-205ENST00000568896 ZNF56Q15929 161 aa12.48□□□□□ -0.41
SYNGR3-205ENST00000568896 C6orf223Q8N319 242 aa12.48□□□□□ -0.41
SYNGR3-205ENST00000568896 SMDT1Q9H4I9 107 aa12.48□□□□□ -0.41
SYNGR3-205ENST00000568896 KIF25-AS1Q9Y6Z4 181 aa12.48□□□□□ -0.41
SYNGR3-205ENST00000568896 RAB4BP61018 213 aa12.47□□□□□ -0.41
SYNGR3-205ENST00000568896 FAM74A3Q4VXF1 159 aa12.47□□□□□ -0.41
SYNGR3-205ENST00000568896 MAPKAPK5-AS1Q8N8E1 139 aa12.47□□□□□ -0.41
SYNGR3-205ENST00000568896 GTSF1Q8WW33 167 aa12.47□□□□□ -0.41
SYNGR3-205ENST00000568896 GTSF1LQ9H1H1 148 aa12.47□□□□□ -0.41
SYNGR3-205ENST00000568896 TRBV10-1A0A0K0K1A3 114 aa12.46□□□□□ -0.41
SYNGR3-205ENST00000568896 CDK2AP2O75956 126 aa12.46□□□□□ -0.41
SYNGR3-205ENST00000568896 SMIM17P0DL12 118 aa12.46□□□□□ -0.41
SYNGR3-205ENST00000568896 LINC00315P59091 139 aa12.46□□□□□ -0.41
SYNGR3-205ENST00000568896 RAB14P61106 215 aa12.46□□□□□ -0.41
SYNGR3-205ENST00000568896 TMEM241Q24JQ0 296 aa12.46□□□□□ -0.41
SYNGR3-205ENST00000568896 CT83Q5H943 113 aa12.46□□□□□ -0.41
SYNGR3-205ENST00000568896 CNFNQ9BYD5 112 aa12.46□□□□□ -0.41
SYNGR3-205ENST00000568896 A8MWL6 223 aa12.45□□□□□ -0.42
SYNGR3-205ENST00000568896 NTF3P20783 257 aa12.45□□□□□ -0.42
SYNGR3-205ENST00000568896 WDR73Q6P4I2 378 aa12.45□□□□□ -0.42
SYNGR3-205ENST00000568896 OSTCQ9NRP0 149 aa12.45□□□□□ -0.42
SYNGR3-205ENST00000568896 F5H697 171 aa12.44□□□□□ -0.42
SYNGR3-205ENST00000568896 DNAH10OSP0CZ25 163 aa12.44□□□□□ -0.42
SYNGR3-205ENST00000568896 RPL23P62829 140 aaKnown RBP12.44□□□□□ -0.42
SYNGR3-205ENST00000568896 IFITM2Q01629 132 aa12.44□□□□□ -0.42
SYNGR3-205ENST00000568896 LELP1Q5T871 98 aa12.44□□□□□ -0.42
SYNGR3-205ENST00000568896 ISOC2Q96AB3 205 aa12.44□□□□□ -0.42
SYNGR3-205ENST00000568896 NAT8Q9UHE5 227 aa12.44□□□□□ -0.42
SYNGR3-205ENST00000568896 MGPP08493 103 aa12.43□□□□□ -0.42
SYNGR3-205ENST00000568896 TRGC1P0CF51 173 aa12.43□□□□□ -0.42
SYNGR3-205ENST00000568896 EVI2AP22794 236 aa12.43□□□□□ -0.42
SYNGR3-205ENST00000568896 RPL36AP83881 106 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms