RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 RHODO00212 210 aa11.72□□□□□ -0.53
COMMD4-224ENST00000568877 MT-ND4LP03901 98 aa11.72□□□□□ -0.53
COMMD4-224ENST00000568877 CRYGDP07320 174 aa11.72□□□□□ -0.53
COMMD4-224ENST00000568877 GATA1P15976 413 aaPredicted RBP11.72□□□□□ -0.53
COMMD4-224ENST00000568877 NTF3P20783 257 aa11.72□□□□□ -0.53
COMMD4-224ENST00000568877 CRYBA4P53673 196 aa11.72□□□□□ -0.53
COMMD4-224ENST00000568877 CARHSP1Q9Y2V2 147 aaKnown RBP11.72□□□□□ -0.53
COMMD4-224ENST00000568877 SMIM27A0A1W2PRY6 76 aa11.71□□□□□ -0.53
COMMD4-224ENST00000568877 H3BNG1 76 aa11.71□□□□□ -0.53
COMMD4-224ENST00000568877 PAX4O43316 350 aa11.71□□□□□ -0.53
COMMD4-224ENST00000568877 FAM74A4Q5TZK3 123 aa11.71□□□□□ -0.53
COMMD4-224ENST00000568877 C15orf53Q8NAA6 179 aa11.71□□□□□ -0.53
COMMD4-224ENST00000568877 BORCS7Q96B45 105 aa11.71□□□□□ -0.53
COMMD4-224ENST00000568877 ANAPC16Q96DE5 110 aa11.71□□□□□ -0.53
COMMD4-224ENST00000568877 VSIG2Q96IQ7 327 aa11.71□□□□□ -0.53
COMMD4-224ENST00000568877 AP1S3Q96PC3 154 aa11.71□□□□□ -0.53
COMMD4-224ENST00000568877 TWIST1Q15672 202 aa11.7□□□□□ -0.54
COMMD4-224ENST00000568877 SLC7A5P1Q8MH63 180 aa11.7□□□□□ -0.54
COMMD4-224ENST00000568877 C14orf178Q8N769 122 aaPredicted RBP11.7□□□□□ -0.54
COMMD4-224ENST00000568877 NUP35Q8NFH5 326 aa11.7□□□□□ -0.54
COMMD4-224ENST00000568877 NAT8BQ9UHF3 227 aa11.7□□□□□ -0.54
COMMD4-224ENST00000568877 TRBV6-4A0A1B0GX49 114 aa11.69□□□□□ -0.54
COMMD4-224ENST00000568877 NUDT3O95989 172 aa11.69□□□□□ -0.54
COMMD4-224ENST00000568877 TRGC1P0CF51 173 aa11.69□□□□□ -0.54
COMMD4-224ENST00000568877 SMIM17P0DL12 118 aa11.69□□□□□ -0.54
COMMD4-224ENST00000568877 SLC25A29Q8N8R3 303 aa11.69□□□□□ -0.54
COMMD4-224ENST00000568877 KIF25-AS1Q9Y6Z4 181 aa11.69□□□□□ -0.54
COMMD4-224ENST00000568877 A0A1B0GUT8 65 aa11.68□□□□□ -0.54
COMMD4-224ENST00000568877 NDUFA5Q16718 116 aa11.68□□□□□ -0.54
COMMD4-224ENST00000568877 Q6ZSN1 163 aa11.68□□□□□ -0.54
COMMD4-224ENST00000568877 EVI2AP22794 236 aa11.67□□□□□ -0.54
COMMD4-224ENST00000568877 PRADC1Q9BSG0 188 aa11.67□□□□□ -0.54
COMMD4-224ENST00000568877 LINC00315P59091 139 aa11.66□□□□□ -0.54
COMMD4-224ENST00000568877 RAB4BP61018 213 aa11.66□□□□□ -0.54
COMMD4-224ENST00000568877 RIGQ13278 110 aa11.66□□□□□ -0.54
COMMD4-224ENST00000568877 RHOHQ15669 191 aa11.66□□□□□ -0.54
COMMD4-224ENST00000568877 ZNF56Q15929 161 aa11.66□□□□□ -0.54
COMMD4-224ENST00000568877 CTDSP1Q9GZU7 261 aa11.66□□□□□ -0.54
COMMD4-224ENST00000568877 ICOSQ9Y6W8 199 aa11.66□□□□□ -0.54
COMMD4-224ENST00000568877 NACAE9PAV3 2078 aa11.66□□□□□ -0.54
COMMD4-224ENST00000568877 TENM2Q9NT68 2774 aa11.65□□□□□ -0.54
COMMD4-224ENST00000568877 A0A096LPF7 62 aa11.65□□□□□ -0.54
COMMD4-224ENST00000568877 F5H697 171 aa11.65□□□□□ -0.54
COMMD4-224ENST00000568877 K7EQD1 137 aa11.65□□□□□ -0.54
COMMD4-224ENST00000568877 APOC3P02656 99 aa11.65□□□□□ -0.54
COMMD4-224ENST00000568877 GYPEP15421 78 aa11.65□□□□□ -0.54
COMMD4-224ENST00000568877 SMIM15Q7Z3B0 74 aa11.65□□□□□ -0.54
COMMD4-224ENST00000568877 CLRN3Q8NCR9 226 aa11.65□□□□□ -0.54
COMMD4-224ENST00000568877 DPH3P1Q9H4G8 78 aa11.65□□□□□ -0.54
COMMD4-224ENST00000568877 LOC100131303A0A0U1RQF7 123 aa11.64□□□□□ -0.55
COMMD4-224ENST00000568877 MRPL23Q16540 153 aaKnown RBP11.64□□□□□ -0.55
COMMD4-224ENST00000568877 C7orf77A4D0Y5 90 aa11.63□□□□□ -0.55
COMMD4-224ENST00000568877 MGPP08493 103 aa11.63□□□□□ -0.55
COMMD4-224ENST00000568877 FAM3BP58499 235 aaPredicted RBP11.63□□□□□ -0.55
COMMD4-224ENST00000568877 RHEBQ15382 184 aa11.63□□□□□ -0.55
COMMD4-224ENST00000568877 SVBPQ8N300 66 aa11.63□□□□□ -0.55
COMMD4-224ENST00000568877 IMMP2LQ96T52 175 aa11.63□□□□□ -0.55
COMMD4-224ENST00000568877 SRIP30626 198 aa11.62□□□□□ -0.55
COMMD4-224ENST00000568877 TMEM242Q9NWH2 141 aa11.62□□□□□ -0.55
COMMD4-224ENST00000568877 DNAH1Q9P2D7 4330 aa11.61□□□□□ -0.55
COMMD4-224ENST00000568877 A0A087WWC5 75 aa11.61□□□□□ -0.55
COMMD4-224ENST00000568877 TRBV10-1A0A0K0K1A3 114 aa11.61□□□□□ -0.55
COMMD4-224ENST00000568877 A0A1B0GW15 77 aa11.61□□□□□ -0.55
COMMD4-224ENST00000568877 SNAPINO95295 136 aa11.61□□□□□ -0.55
COMMD4-224ENST00000568877 P0DMU3 169 aa11.61□□□□□ -0.55
COMMD4-224ENST00000568877 FAM231AP0DMU4 169 aa11.61□□□□□ -0.55
COMMD4-224ENST00000568877 FAM231CP0DMU5 169 aa11.61□□□□□ -0.55
COMMD4-224ENST00000568877 LGALS9CQ6DKI2 356 aa11.61□□□□□ -0.55
COMMD4-224ENST00000568877 TMEM191AQ9H0A3 160 aa11.61□□□□□ -0.55
COMMD4-224ENST00000568877 RPS10P5Q9NQ39 176 aa11.61□□□□□ -0.55
COMMD4-224ENST00000568877 Q9UF83 564 aa11.61□□□□□ -0.55
COMMD4-224ENST00000568877 VPS13DQ5THJ4 4388 aa11.6□□□□□ -0.55
COMMD4-224ENST00000568877 SUMO4Q6EEV6 95 aa11.6□□□□□ -0.55
COMMD4-224ENST00000568877 MRPL54Q6P161 138 aaKnown RBP11.6□□□□□ -0.55
COMMD4-224ENST00000568877 NEGR1Q7Z3B1 354 aa11.6□□□□□ -0.55
COMMD4-224ENST00000568877 SH2D6Q7Z4S9 175 aa11.6□□□□□ -0.55
COMMD4-224ENST00000568877 LINC00476Q8WZB0 136 aa11.6□□□□□ -0.55
COMMD4-224ENST00000568877 ALMS1Q8TCU4 4167 aa11.6□□□□□ -0.55
COMMD4-224ENST00000568877 A0A1B0GXF2 115 aa11.59□□□□□ -0.55
COMMD4-224ENST00000568877 GAGE12JA6NER3 117 aa11.59□□□□□ -0.55
COMMD4-224ENST00000568877 H7C1H1 209 aa11.59□□□□□ -0.55
COMMD4-224ENST00000568877 M0QY20 66 aa11.59□□□□□ -0.55
COMMD4-224ENST00000568877 CAMPP49913 170 aa11.59□□□□□ -0.55
COMMD4-224ENST00000568877 CCL18P55774 89 aa11.59□□□□□ -0.55
COMMD4-224ENST00000568877 HBBP68871 147 aa11.59□□□□□ -0.55
COMMD4-224ENST00000568877 GAGE1Q13065 139 aa11.59□□□□□ -0.55
COMMD4-224ENST00000568877 GAGE4Q13068 117 aa11.59□□□□□ -0.55
COMMD4-224ENST00000568877 GAGE5Q13069 117 aa11.59□□□□□ -0.55
COMMD4-224ENST00000568877 GAGE13Q4V321 117 aa11.59□□□□□ -0.55
COMMD4-224ENST00000568877 KCNIP4Q6PIL6 250 aa11.59□□□□□ -0.55
COMMD4-224ENST00000568877 ATP5L2Q7Z4Y8 100 aa11.59□□□□□ -0.55
COMMD4-224ENST00000568877 LY6G6CO95867 125 aa11.58□□□□□ -0.56
COMMD4-224ENST00000568877 S100A8P05109 93 aa11.58□□□□□ -0.56
COMMD4-224ENST00000568877 ESRGQ1W209 222 aa11.58□□□□□ -0.56
COMMD4-224ENST00000568877 ZNRF2Q8NHG8 242 aa11.58□□□□□ -0.56
COMMD4-224ENST00000568877 BTF3L4Q96K17 158 aa11.58□□□□□ -0.56
COMMD4-224ENST00000568877 SACSQ9NZJ4 4579 aa11.57□□□□□ -0.56
COMMD4-224ENST00000568877 LCE6AA0A183 80 aa11.57□□□□□ -0.56
COMMD4-224ENST00000568877 LINC00694P0DN24 101 aa11.57□□□□□ -0.56
COMMD4-224ENST00000568877 S100PP25815 95 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 178.3 ms