RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 LGALS1P09382 135 aaKnown RBP6.77□□□□□ -1.33
HDGFL3-206ENST00000568294 EBI3Q14213 229 aa6.77□□□□□ -1.33
HDGFL3-206ENST00000568294 Q1RN00 199 aa6.77□□□□□ -1.33
HDGFL3-206ENST00000568294 DUX3Q96PT4 197 aa6.77□□□□□ -1.33
HDGFL3-206ENST00000568294 ITPR1Q14643 2758 aa6.76□□□□□ -1.33
HDGFL3-206ENST00000568294 HOXA3O43365 443 aaPredicted RBP6.76□□□□□ -1.33
HDGFL3-206ENST00000568294 ORMDL2Q53FV1 153 aa6.76□□□□□ -1.33
HDGFL3-206ENST00000568294 C9orf47Q6ZRZ4 202 aa6.76□□□□□ -1.33
HDGFL3-206ENST00000568294 CNFNQ9BYD5 112 aa6.76□□□□□ -1.33
HDGFL3-206ENST00000568294 MDFICQ9P1T7 246 aa6.76□□□□□ -1.33
HDGFL3-206ENST00000568294 JMJD1CQ15652 2540 aa6.76□□□□□ -1.33
HDGFL3-206ENST00000568294 IGHV1-69DA0A0B4J2H0 117 aa6.76□□□□□ -1.33
HDGFL3-206ENST00000568294 IGHV1-69P01742 117 aa6.76□□□□□ -1.33
HDGFL3-206ENST00000568294 FBXL19-AS1Q494R0 122 aa6.76□□□□□ -1.33
HDGFL3-206ENST00000568294 IGHV4-30-2A0A087WSY4 118 aa6.75□□□□□ -1.33
HDGFL3-206ENST00000568294 A4D1N5 150 aa6.75□□□□□ -1.33
HDGFL3-206ENST00000568294 CCL19Q99731 98 aa6.75□□□□□ -1.33
HDGFL3-206ENST00000568294 TRAV2A0A0B4J234 112 aa6.75□□□□□ -1.33
HDGFL3-206ENST00000568294 RBAKDNA6NC62 111 aa6.75□□□□□ -1.33
HDGFL3-206ENST00000568294 SDHAF1A6NFY7 115 aa6.75□□□□□ -1.33
HDGFL3-206ENST00000568294 P0DMU3 169 aa6.75□□□□□ -1.33
HDGFL3-206ENST00000568294 FAM231AP0DMU4 169 aa6.75□□□□□ -1.33
HDGFL3-206ENST00000568294 FAM231CP0DMU5 169 aa6.75□□□□□ -1.33
HDGFL3-206ENST00000568294 SYNJ2BPP57105 145 aa6.75□□□□□ -1.33
HDGFL3-206ENST00000568294 DEFB136Q30KP8 78 aa6.75□□□□□ -1.33
HDGFL3-206ENST00000568294 SUMO4Q6EEV6 95 aa6.75□□□□□ -1.33
HDGFL3-206ENST00000568294 C20orf78Q9BR46 151 aa6.75□□□□□ -1.33
HDGFL3-206ENST00000568294 SMPXQ9UHP9 88 aa6.75□□□□□ -1.33
HDGFL3-206ENST00000568294 ZNF580Q9UK33 172 aa6.75□□□□□ -1.33
HDGFL3-206ENST00000568294 RNASE3P12724 160 aaKnown RBP6.75□□□□□ -1.33
HDGFL3-206ENST00000568294 CEMP1Q6PRD7 247 aaPredicted RBP6.75□□□□□ -1.33
HDGFL3-206ENST00000568294 C11orf44Q8N8P7 122 aa6.75□□□□□ -1.33
HDGFL3-206ENST00000568294 KIR2DL4Q99706 377 aa6.75□□□□□ -1.33
HDGFL3-206ENST00000568294 ZMAT4Q9H898 229 aa6.75□□□□□ -1.33
HDGFL3-206ENST00000568294 EPG5Q9HCE0 2579 aa6.75□□□□□ -1.33
HDGFL3-206ENST00000568294 A0A0U1RRA0 63 aa6.74□□□□□ -1.33
HDGFL3-206ENST00000568294 RRN3P1Q2M238 152 aa6.74□□□□□ -1.33
HDGFL3-206ENST00000568294 FOXI2Q6ZQN5 318 aa6.74□□□□□ -1.33
HDGFL3-206ENST00000568294 CFAP46Q8IYW2 2715 aa6.74□□□□□ -1.33
HDGFL3-206ENST00000568294 PHLDA1Q8WV24 401 aaPredicted RBP6.74□□□□□ -1.33
HDGFL3-206ENST00000568294 MRAP2Q96G30 205 aa6.74□□□□□ -1.33
HDGFL3-206ENST00000568294 IGHV3OR16-12A0A075B7B8 117 aa6.74□□□□□ -1.33
HDGFL3-206ENST00000568294 IGHV4-59P01825 116 aa6.74□□□□□ -1.33
HDGFL3-206ENST00000568294 SPAG8Q99932 426 aaPredicted RBP6.74□□□□□ -1.33
HDGFL3-206ENST00000568294 PRSS2P07478 247 aa6.74□□□□□ -1.33
HDGFL3-206ENST00000568294 PIFOQ8TCI5 191 aa6.74□□□□□ -1.33
HDGFL3-206ENST00000568294 OVOL1O14753 267 aa6.73□□□□□ -1.33
HDGFL3-206ENST00000568294 AVPP01185 164 aa6.73□□□□□ -1.33
HDGFL3-206ENST00000568294 COX8CQ7Z4L0 72 aa6.73□□□□□ -1.33
HDGFL3-206ENST00000568294 NEXN-AS1Q8NBZ9 246 aa6.73□□□□□ -1.33
HDGFL3-206ENST00000568294 PIMREGQ9BSJ6 248 aa6.73□□□□□ -1.33
HDGFL3-206ENST00000568294 PRRC2AP48634 2157 aaKnown RBP6.73□□□□□ -1.33
HDGFL3-206ENST00000568294 GAGE12HA6NDE8 117 aa6.73□□□□□ -1.33
HDGFL3-206ENST00000568294 E9PLD3 99 aa6.73□□□□□ -1.33
HDGFL3-206ENST00000568294 PROK1P58294 105 aa6.73□□□□□ -1.33
HDGFL3-206ENST00000568294 TSPEAR-AS2P59090 65 aa6.73□□□□□ -1.33
HDGFL3-206ENST00000568294 TOMM6Q96B49 74 aa6.73□□□□□ -1.33
HDGFL3-206ENST00000568294 DAZ1Q9NQZ3 744 aaKnown RBP6.73□□□□□ -1.33
HDGFL3-206ENST00000568294 SPANXB1Q9NS25 103 aaPredicted RBP6.73□□□□□ -1.33
HDGFL3-206ENST00000568294 HIGD1BQ9P298 99 aa6.73□□□□□ -1.33
HDGFL3-206ENST00000568294 MUC4Q99102 2169 aa6.73□□□□□ -1.33
HDGFL3-206ENST00000568294 IGHV3-38A0A0C4DH36 116 aa6.72□□□□□ -1.33
HDGFL3-206ENST00000568294 LGALS3P17931 250 aaKnown RBP6.72□□□□□ -1.33
HDGFL3-206ENST00000568294 ITLN2Q8WWU7 325 aaPredicted RBP6.72□□□□□ -1.33
HDGFL3-206ENST00000568294 SIGMAR1Q99720 223 aa6.72□□□□□ -1.33
HDGFL3-206ENST00000568294 TM2D2Q9BX73 214 aa6.72□□□□□ -1.33
HDGFL3-206ENST00000568294 IGHV3-16A0A0C4DH30 117 aa6.72□□□□□ -1.33
HDGFL3-206ENST00000568294 FAM223BA6NKX1 122 aa6.72□□□□□ -1.33
HDGFL3-206ENST00000568294 J3QR89 54 aa6.72□□□□□ -1.33
HDGFL3-206ENST00000568294 HERVK_113P61574 105 aa6.72□□□□□ -1.33
HDGFL3-206ENST00000568294 FAM223AQ8IWN6 122 aa6.72□□□□□ -1.33
HDGFL3-206ENST00000568294 TRBV7-3A0A075B6L6 115 aa6.72□□□□□ -1.33
HDGFL3-206ENST00000568294 NDUFA4O00483 81 aa6.72□□□□□ -1.33
HDGFL3-206ENST00000568294 SYT8Q8NBV8 401 aa6.72□□□□□ -1.33
HDGFL3-206ENST00000568294 PSMG3-AS1Q96PY0 264 aa6.72□□□□□ -1.33
HDGFL3-206ENST00000568294 SPXQ9BT56 116 aa6.72□□□□□ -1.33
HDGFL3-206ENST00000568294 A8MZ25 164 aa6.71□□□□□ -1.33
HDGFL3-206ENST00000568294 ZNF876PQ49A33 203 aa6.71□□□□□ -1.33
HDGFL3-206ENST00000568294 Q8N1Y9 231 aa6.71□□□□□ -1.33
HDGFL3-206ENST00000568294 ZNF462Q96JM2 2506 aa6.71□□□□□ -1.34
HDGFL3-206ENST00000568294 NDUFS8O00217 210 aa6.71□□□□□ -1.34
HDGFL3-206ENST00000568294 MORN3Q6PF18 240 aaPredicted RBP6.71□□□□□ -1.34
HDGFL3-206ENST00000568294 TMEM190Q8WZ59 177 aa6.71□□□□□ -1.34
HDGFL3-206ENST00000568294 MTORP42345 2549 aa6.71□□□□□ -1.34
HDGFL3-206ENST00000568294 A0A0J9YXV3 536 aa6.71□□□□□ -1.34
HDGFL3-206ENST00000568294 TSPAN13O95857 204 aa6.71□□□□□ -1.34
HDGFL3-206ENST00000568294 TSHBP01222 138 aa6.71□□□□□ -1.34
HDGFL3-206ENST00000568294 ANKRD17O75179 2603 aaKnown RBP6.7□□□□□ -1.34
HDGFL3-206ENST00000568294 ID1P41134 155 aa6.7□□□□□ -1.34
HDGFL3-206ENST00000568294 SRSF2Q01130 221 aaKnown RBP6.7□□□□□ -1.34
HDGFL3-206ENST00000568294 U3KQE9 123 aa6.7□□□□□ -1.34
HDGFL3-206ENST00000568294 CRYGDP07320 174 aa6.7□□□□□ -1.34
HDGFL3-206ENST00000568294 ZNRF2Q8NHG8 242 aa6.7□□□□□ -1.34
HDGFL3-206ENST00000568294 Q9UF83 564 aa6.7□□□□□ -1.34
HDGFL3-206ENST00000568294 RNF223E7ERA6 249 aa6.69□□□□□ -1.34
HDGFL3-206ENST00000568294 UCNP55089 124 aa6.69□□□□□ -1.34
HDGFL3-206ENST00000568294 DEFB112Q30KQ8 113 aa6.69□□□□□ -1.34
HDGFL3-206ENST00000568294 TRPT1Q86TN4 253 aaKnown RBP6.69□□□□□ -1.34
HDGFL3-206ENST00000568294 FBN2P35556 2912 aa6.69□□□□□ -1.34
HDGFL3-206ENST00000568294 PMVKQ15126 192 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms