RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 ARFGEF3Q5TH69 2177 aa3.98□□□□□ -1.77
CAPN3-217ENST00000567817 IGKV2-40A0A087WW87 121 aaPredicted RBP3.98□□□□□ -1.77
CAPN3-217ENST00000567817 TRAV41A0A0B4J266 112 aa3.98□□□□□ -1.77
CAPN3-217ENST00000567817 IGHV1-69DA0A0B4J2H0 117 aa3.98□□□□□ -1.77
CAPN3-217ENST00000567817 A0A0G2JLM5 398 aa3.98□□□□□ -1.77
CAPN3-217ENST00000567817 LINC01549A6NIU2 74 aa3.98□□□□□ -1.77
CAPN3-217ENST00000567817 PRSS47A8MTI9 375 aa3.98□□□□□ -1.77
CAPN3-217ENST00000567817 D6R8Y8 96 aa3.98□□□□□ -1.77
CAPN3-217ENST00000567817 NDUFA4O00483 81 aa3.98□□□□□ -1.77
CAPN3-217ENST00000567817 OVOL1O14753 267 aa3.98□□□□□ -1.77
CAPN3-217ENST00000567817 ATP5LO75964 103 aa3.98□□□□□ -1.77
CAPN3-217ENST00000567817 LY6HO94772 140 aa3.98□□□□□ -1.77
CAPN3-217ENST00000567817 PPP1R17O96001 155 aa3.98□□□□□ -1.77
CAPN3-217ENST00000567817 IGKV2D-40P01614 121 aaPredicted RBP3.98□□□□□ -1.77
CAPN3-217ENST00000567817 IGHV1-69P01742 117 aa3.98□□□□□ -1.77
CAPN3-217ENST00000567817 ORM1P02763 201 aa3.98□□□□□ -1.77
CAPN3-217ENST00000567817 COX8AP10176 69 aa3.98□□□□□ -1.77
CAPN3-217ENST00000567817 CD24P25063 80 aa3.98□□□□□ -1.77
CAPN3-217ENST00000567817 G0S2P27469 103 aa3.98□□□□□ -1.77
CAPN3-217ENST00000567817 ZNF138P52744 262 aa3.98□□□□□ -1.77
CAPN3-217ENST00000567817 LMO4P61968 165 aa3.98□□□□□ -1.77
CAPN3-217ENST00000567817 SEC11AP67812 179 aa3.98□□□□□ -1.77
CAPN3-217ENST00000567817 PRB3Q04118 309 aaPredicted RBP3.98□□□□□ -1.77
CAPN3-217ENST00000567817 BATFQ16520 125 aa3.98□□□□□ -1.77
CAPN3-217ENST00000567817 DYNAPQ8N1N2 210 aa3.98□□□□□ -1.77
CAPN3-217ENST00000567817 OR9G4Q8NGQ1 327 aa3.98□□□□□ -1.77
CAPN3-217ENST00000567817 LINC00477Q96M19 166 aa3.98□□□□□ -1.77
CAPN3-217ENST00000567817 SCRT2Q9NQ03 307 aa3.98□□□□□ -1.77
CAPN3-217ENST00000567817 B4DSR2 109 aa3.97□□□□□ -1.77
CAPN3-217ENST00000567817 M0QZ24 198 aa3.97□□□□□ -1.77
CAPN3-217ENST00000567817 HLA-DRB4P13762 266 aa3.97□□□□□ -1.77
CAPN3-217ENST00000567817 SEC61BP60468 96 aaKnown RBP3.97□□□□□ -1.77
CAPN3-217ENST00000567817 MRPL51Q4U2R6 128 aaKnown RBP3.97□□□□□ -1.77
CAPN3-217ENST00000567817 PAPPA-AS1Q5QFB9 102 aa3.97□□□□□ -1.77
CAPN3-217ENST00000567817 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.97□□□□□ -1.77
CAPN3-217ENST00000567817 AMN1Q8IY45 258 aa3.97□□□□□ -1.77
CAPN3-217ENST00000567817 IFI27L1Q96BM0 104 aa3.97□□□□□ -1.77
CAPN3-217ENST00000567817 MRAP2Q96G30 205 aa3.97□□□□□ -1.77
CAPN3-217ENST00000567817 SIGLEC8Q9NYZ4 499 aa3.97□□□□□ -1.77
CAPN3-217ENST00000567817 SMAD5-AS1Q9Y6J3 95 aa3.97□□□□□ -1.77
CAPN3-217ENST00000567817 HLA-DRB4X5D2U9 266 aa3.97□□□□□ -1.77
CAPN3-217ENST00000567817 TENM3Q9P273 2699 aa3.96□□□□□ -1.78
CAPN3-217ENST00000567817 TMSB15BA0A087X1C1 80 aa3.96□□□□□ -1.78
CAPN3-217ENST00000567817 TRAV21A0A0B4J279 112 aa3.96□□□□□ -1.78
CAPN3-217ENST00000567817 IGHV4-61A0A0C4DH41 118 aa3.96□□□□□ -1.78
CAPN3-217ENST00000567817 CLPSL1A2RUU4 121 aa3.96□□□□□ -1.78
CAPN3-217ENST00000567817 A6NDN8 102 aa3.96□□□□□ -1.78
CAPN3-217ENST00000567817 SNAI2O43623 268 aa3.96□□□□□ -1.78
CAPN3-217ENST00000567817 IGHV3-23P01764 117 aa3.96□□□□□ -1.78
CAPN3-217ENST00000567817 IGHG2P01859 326 aa3.96□□□□□ -1.78
CAPN3-217ENST00000567817 IGHG4P01861 327 aa3.96□□□□□ -1.78
CAPN3-217ENST00000567817 CSN3P07498 182 aa3.96□□□□□ -1.78
CAPN3-217ENST00000567817 FCER1GP30273 86 aa3.96□□□□□ -1.78
CAPN3-217ENST00000567817 ARL3P36405 182 aa3.96□□□□□ -1.78
CAPN3-217ENST00000567817 IFI27P40305 119 aaPredicted RBP3.96□□□□□ -1.78
CAPN3-217ENST00000567817 UBE2V1Q13404 147 aa3.96□□□□□ -1.78
CAPN3-217ENST00000567817 BVES-AS1Q5T3Y7 98 aa3.96□□□□□ -1.78
CAPN3-217ENST00000567817 CLEC19AQ6UXS0 136 aa3.96□□□□□ -1.78
CAPN3-217ENST00000567817 SMIM29Q86T20 159 aa3.96□□□□□ -1.78
CAPN3-217ENST00000567817 ATOH7Q8N100 152 aa3.96□□□□□ -1.78
CAPN3-217ENST00000567817 STPG4Q8N801 248 aa3.96□□□□□ -1.78
CAPN3-217ENST00000567817 Q8N8P6 123 aa3.96□□□□□ -1.78
CAPN3-217ENST00000567817 OR4X2Q8NGF9 303 aa3.96□□□□□ -1.78
CAPN3-217ENST00000567817 OR10J6PQ8NGY7 276 aa3.96□□□□□ -1.78
CAPN3-217ENST00000567817 Q8TAT8 98 aa3.96□□□□□ -1.78
CAPN3-217ENST00000567817 VGLL1Q99990 258 aa3.96□□□□□ -1.78
CAPN3-217ENST00000567817 PEF1Q9UBV8 284 aaKnown RBP3.96□□□□□ -1.78
CAPN3-217ENST00000567817 TRAV8-2A0A0B4J237 113 aa3.95□□□□□ -1.78
CAPN3-217ENST00000567817 TMEM213A2RRL7 107 aa3.95□□□□□ -1.78
CAPN3-217ENST00000567817 C7orf71A4D174 169 aa3.95□□□□□ -1.78
CAPN3-217ENST00000567817 J3QLI3 93 aa3.95□□□□□ -1.78
CAPN3-217ENST00000567817 K7EMT4 169 aa3.95□□□□□ -1.78
CAPN3-217ENST00000567817 M0R381 172 aa3.95□□□□□ -1.78
CAPN3-217ENST00000567817 TRGV3P03979 118 aa3.95□□□□□ -1.78
CAPN3-217ENST00000567817 ID1P41134 155 aa3.95□□□□□ -1.78
CAPN3-217ENST00000567817 HINT1P49773 126 aaPredicted RBP3.95□□□□□ -1.78
CAPN3-217ENST00000567817 ZNF80P51504 273 aaPredicted RBP3.95□□□□□ -1.78
CAPN3-217ENST00000567817 HSD52Q0P140 79 aa3.95□□□□□ -1.78
CAPN3-217ENST00000567817 ORMDL2Q53FV1 153 aa3.95□□□□□ -1.78
CAPN3-217ENST00000567817 APRG1Q8IVJ8 170 aa3.95□□□□□ -1.78
CAPN3-217ENST00000567817 BOD1L2Q8IYS8 172 aa3.95□□□□□ -1.78
CAPN3-217ENST00000567817 OR8A1Q8NGG7 326 aa3.95□□□□□ -1.78
CAPN3-217ENST00000567817 MYOZ3Q8TDC0 251 aa3.95□□□□□ -1.78
CAPN3-217ENST00000567817 ODF3Q96PU9 254 aa3.95□□□□□ -1.78
CAPN3-217ENST00000567817 C20orf78Q9BR46 151 aa3.95□□□□□ -1.78
CAPN3-217ENST00000567817 AGPAT4-IT1Q9H0P7 198 aa3.95□□□□□ -1.78
CAPN3-217ENST00000567817 CBY1Q9Y3M2 126 aa3.95□□□□□ -1.78
CAPN3-217ENST00000567817 S4R3C0 116 aa3.95□□□□□ -1.78
CAPN3-217ENST00000567817 BIRC6Q9NR09 4857 aa3.95□□□□□ -1.78
CAPN3-217ENST00000567817 A0A096LNJ9 63 aa3.94□□□□□ -1.78
CAPN3-217ENST00000567817 TRAV40A0A0B4J280 105 aa3.94□□□□□ -1.78
CAPN3-217ENST00000567817 IGKV3D-20A0A0C4DH25 116 aa3.94□□□□□ -1.78
CAPN3-217ENST00000567817 LOC389332A0A1B0GUA5 103 aa3.94□□□□□ -1.78
CAPN3-217ENST00000567817 A6NDX4 124 aa3.94□□□□□ -1.78
CAPN3-217ENST00000567817 G3V318 75 aa3.94□□□□□ -1.78
CAPN3-217ENST00000567817 NPYP01303 97 aa3.94□□□□□ -1.78
CAPN3-217ENST00000567817 MSMBP08118 114 aa3.94□□□□□ -1.78
CAPN3-217ENST00000567817 PLNP26678 52 aa3.94□□□□□ -1.78
CAPN3-217ENST00000567817 LEPP41159 167 aa3.94□□□□□ -1.78
CAPN3-217ENST00000567817 ASIPP42127 132 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms