RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 PARLQ9H300 379 aa12.67□□□□□ -0.38
GTF3C1-207ENST00000567806 FAT1Q14517 4588 aa12.67□□□□□ -0.38
GTF3C1-207ENST00000567806 HERC1Q15751 4861 aa12.66□□□□□ -0.38
GTF3C1-207ENST00000567806 SMR3BP02814 79 aaPredicted RBP12.66□□□□□ -0.38
GTF3C1-207ENST00000567806 CENPWQ5EE01 88 aa12.66□□□□□ -0.38
GTF3C1-207ENST00000567806 DAZAP1Q96EP5 407 aaKnown RBP12.66□□□□□ -0.38
GTF3C1-207ENST00000567806 TVP23CQ96ET8 276 aa12.66□□□□□ -0.38
GTF3C1-207ENST00000567806 SMIM7Q9BQ49 75 aa12.66□□□□□ -0.38
GTF3C1-207ENST00000567806 IGLV5-52A0A0A0MRZ9 124 aa12.65□□□□□ -0.38
GTF3C1-207ENST00000567806 ZNF727A8MUV8 499 aa12.65□□□□□ -0.38
GTF3C1-207ENST00000567806 FAM229AH3BQW9 127 aa12.65□□□□□ -0.38
GTF3C1-207ENST00000567806 CEBPGP53567 150 aa12.65□□□□□ -0.38
GTF3C1-207ENST00000567806 ZNF674Q2M3X9 581 aa12.65□□□□□ -0.38
GTF3C1-207ENST00000567806 LINC01556Q5JQF7 62 aa12.65□□□□□ -0.38
GTF3C1-207ENST00000567806 OR10J3Q5JRS4 329 aa12.65□□□□□ -0.38
GTF3C1-207ENST00000567806 PRADC1Q9BSG0 188 aa12.65□□□□□ -0.38
GTF3C1-207ENST00000567806 MLST8Q9BVC4 326 aa12.65□□□□□ -0.38
GTF3C1-207ENST00000567806 IBA57-AS1B1ANH7 110 aa12.64□□□□□ -0.39
GTF3C1-207ENST00000567806 CIDEAO60543 219 aa12.64□□□□□ -0.39
GTF3C1-207ENST00000567806 ZNF876PQ49A33 203 aa12.64□□□□□ -0.39
GTF3C1-207ENST00000567806 NTN5Q8WTR8 489 aaPredicted RBP12.64□□□□□ -0.39
GTF3C1-207ENST00000567806 XKRY2A2RUG3 117 aa12.63□□□□□ -0.39
GTF3C1-207ENST00000567806 LINC00862A6NCI5 91 aa12.63□□□□□ -0.39
GTF3C1-207ENST00000567806 SLC25A29Q8N8R3 303 aa12.63□□□□□ -0.39
GTF3C1-207ENST00000567806 DERL1Q9BUN8 251 aa12.63□□□□□ -0.39
GTF3C1-207ENST00000567806 LRCOL1A6NCL2 159 aa12.62□□□□□ -0.39
GTF3C1-207ENST00000567806 RS1O15537 224 aa12.62□□□□□ -0.39
GTF3C1-207ENST00000567806 MGST1P10620 155 aaKnown RBP12.62□□□□□ -0.39
GTF3C1-207ENST00000567806 RHOHQ15669 191 aa12.62□□□□□ -0.39
GTF3C1-207ENST00000567806 ZC2HC1AQ96GY0 325 aa12.62□□□□□ -0.39
GTF3C1-207ENST00000567806 Q9HAA7 133 aa12.62□□□□□ -0.39
GTF3C1-207ENST00000567806 TRBV6-4A0A1B0GX49 114 aa12.61□□□□□ -0.39
GTF3C1-207ENST00000567806 RPS20P60866 119 aaKnown RBP12.61□□□□□ -0.39
GTF3C1-207ENST00000567806 TMEM241Q24JQ0 296 aa12.61□□□□□ -0.39
GTF3C1-207ENST00000567806 CFAP126Q5VTH2 177 aa12.61□□□□□ -0.39
GTF3C1-207ENST00000567806 TMEM70Q9BUB7 260 aa12.61□□□□□ -0.39
GTF3C1-207ENST00000567806 NAT8Q9UHE5 227 aa12.61□□□□□ -0.39
GTF3C1-207ENST00000567806 DMBT1Q9UGM3 2413 aaPredicted RBP12.61□□□□□ -0.39
GTF3C1-207ENST00000567806 VPS13BQ7Z7G8 4022 aa12.61□□□□□ -0.39
GTF3C1-207ENST00000567806 IGHV3-73A0A0B4J1V6 119 aa12.6□□□□□ -0.39
GTF3C1-207ENST00000567806 IGHV3-30P01768 117 aa12.6□□□□□ -0.39
GTF3C1-207ENST00000567806 IGHV3-33P01772 117 aa12.6□□□□□ -0.39
GTF3C1-207ENST00000567806 CXCL1P09341 107 aa12.6□□□□□ -0.39
GTF3C1-207ENST00000567806 IGHV3-30-3P0DP02 117 aa12.6□□□□□ -0.39
GTF3C1-207ENST00000567806 IGHV3-30-5P0DP03 117 aa12.6□□□□□ -0.39
GTF3C1-207ENST00000567806 SH2D1AO60880 128 aa12.59□□□□□ -0.39
GTF3C1-207ENST00000567806 HAMPP81172 84 aa12.59□□□□□ -0.39
GTF3C1-207ENST00000567806 PNRC1Q12796 327 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-207ENST00000567806 NDUFA5Q16718 116 aa12.59□□□□□ -0.39
GTF3C1-207ENST00000567806 LINC01559Q495D7 138 aa12.59□□□□□ -0.39
GTF3C1-207ENST00000567806 LELP1Q5T871 98 aa12.59□□□□□ -0.39
GTF3C1-207ENST00000567806 COMMD7Q86VX2 200 aa12.59□□□□□ -0.39
GTF3C1-207ENST00000567806 Q8N814 137 aa12.59□□□□□ -0.39
GTF3C1-207ENST00000567806 ATP6V0E2Q8NHE4 81 aa12.59□□□□□ -0.39
GTF3C1-207ENST00000567806 SRRM2Q9UQ35 2752 aaKnown RBP12.58□□□□□ -0.39
GTF3C1-207ENST00000567806 P01737 135 aa12.58□□□□□ -0.4
GTF3C1-207ENST00000567806 ZNF80P51504 273 aaPredicted RBP12.58□□□□□ -0.4
GTF3C1-207ENST00000567806 PRR27Q6MZM9 219 aa12.58□□□□□ -0.4
GTF3C1-207ENST00000567806 OCC1Q8TAD7 63 aa12.58□□□□□ -0.4
GTF3C1-207ENST00000567806 TM2D2Q9BX73 214 aa12.58□□□□□ -0.4
GTF3C1-207ENST00000567806 GTSF1LQ9H1H1 148 aa12.58□□□□□ -0.4
GTF3C1-207ENST00000567806 C11orf21Q9P2W6 132 aa12.58□□□□□ -0.4
GTF3C1-207ENST00000567806 TRBV20OR9-2A0A075B6H5 130 aa12.57□□□□□ -0.4
GTF3C1-207ENST00000567806 PGPEP1LA6NFU8 196 aa12.57□□□□□ -0.4
GTF3C1-207ENST00000567806 B4DEV8 164 aa12.57□□□□□ -0.4
GTF3C1-207ENST00000567806 S100A4P26447 101 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-207ENST00000567806 ASIPP42127 132 aa12.57□□□□□ -0.4
GTF3C1-207ENST00000567806 FAM231DQ6ZW35 169 aa12.57□□□□□ -0.4
GTF3C1-207ENST00000567806 PTH2Q96A98 100 aa12.57□□□□□ -0.4
GTF3C1-207ENST00000567806 C9orf85Q96MD7 179 aa12.57□□□□□ -0.4
GTF3C1-207ENST00000567806 IGLV2-8P01709 118 aa12.56□□□□□ -0.4
GTF3C1-207ENST00000567806 CRIP1P50238 77 aa12.56□□□□□ -0.4
GTF3C1-207ENST00000567806 SRSF3P84103 164 aaKnown RBP12.56□□□□□ -0.4
GTF3C1-207ENST00000567806 DNLZQ5SXM8 178 aa12.56□□□□□ -0.4
GTF3C1-207ENST00000567806 Q6ZSN1 163 aa12.56□□□□□ -0.4
GTF3C1-207ENST00000567806 LINC01551Q86U37 167 aa12.56□□□□□ -0.4
GTF3C1-207ENST00000567806 C15orf54Q8N8G6 183 aa12.56□□□□□ -0.4
GTF3C1-207ENST00000567806 TMEM218A2RU14 115 aa12.54□□□□□ -0.4
GTF3C1-207ENST00000567806 C19orf71A6NCJ1 209 aa12.54□□□□□ -0.4
GTF3C1-207ENST00000567806 KRBOX1C9JBD0 128 aa12.54□□□□□ -0.4
GTF3C1-207ENST00000567806 LAGE3Q14657 143 aa12.54□□□□□ -0.4
GTF3C1-207ENST00000567806 CT83Q5H943 113 aa12.54□□□□□ -0.4
GTF3C1-207ENST00000567806 PIK3CD-AS1Q5SR53 167 aa12.54□□□□□ -0.4
GTF3C1-207ENST00000567806 SEC11CQ9BY50 192 aa12.54□□□□□ -0.4
GTF3C1-207ENST00000567806 C9JQL5 133 aa12.53□□□□□ -0.4
GTF3C1-207ENST00000567806 OSTCQ9NRP0 149 aa12.53□□□□□ -0.4
GTF3C1-207ENST00000567806 IL36BQ9NZH7 164 aa12.53□□□□□ -0.4
GTF3C1-207ENST00000567806 IGKV3D-20A0A0C4DH25 116 aa12.52□□□□□ -0.41
GTF3C1-207ENST00000567806 F8W036 122 aa12.52□□□□□ -0.41
GTF3C1-207ENST00000567806 PPP1R2P9O14990 202 aa12.52□□□□□ -0.41
GTF3C1-207ENST00000567806 RNASE3P12724 160 aaKnown RBP12.52□□□□□ -0.41
GTF3C1-207ENST00000567806 SYT8Q8NBV8 401 aa12.52□□□□□ -0.41
GTF3C1-207ENST00000567806 OR2D3Q8NGH3 330 aa12.52□□□□□ -0.41
GTF3C1-207ENST00000567806 FAM30AQ9NZY2 134 aa12.52□□□□□ -0.41
GTF3C1-207ENST00000567806 TRAV8-3A0A0A6YYJ7 113 aa12.51□□□□□ -0.41
GTF3C1-207ENST00000567806 GAGE12JA6NER3 117 aa12.51□□□□□ -0.41
GTF3C1-207ENST00000567806 A8MWL6 223 aa12.51□□□□□ -0.41
GTF3C1-207ENST00000567806 A8MWV9 139 aa12.51□□□□□ -0.41
GTF3C1-207ENST00000567806 F2Z2F3 143 aa12.51□□□□□ -0.41
GTF3C1-207ENST00000567806 M0R036 132 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms