RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 A0A0J9YY99 117 aa1.36□□□□□ -2.19
SHCBP1-206ENST00000567698 APOC4-APOC2K7ER74 178 aa1.36□□□□□ -2.19
SHCBP1-206ENST00000567698 ADGRB2O60241 1585 aa1.36□□□□□ -2.19
SHCBP1-206ENST00000567698 NUPR1O60356 82 aa1.36□□□□□ -2.19
SHCBP1-206ENST00000567698 MPC2O95563 127 aa1.36□□□□□ -2.19
SHCBP1-206ENST00000567698 IGLV3-1P01715 115 aa1.36□□□□□ -2.19
SHCBP1-206ENST00000567698 APOC2P02655 101 aa1.36□□□□□ -2.19
SHCBP1-206ENST00000567698 TRAPPC2P0DI81 140 aa1.36□□□□□ -2.19
SHCBP1-206ENST00000567698 TRAPPC2BP0DI82 140 aa1.36□□□□□ -2.19
SHCBP1-206ENST00000567698 INSL4Q14641 139 aa1.36□□□□□ -2.19
SHCBP1-206ENST00000567698 Q6ZSA8 131 aa1.36□□□□□ -2.19
SHCBP1-206ENST00000567698 C8orf59Q8N0T1 100 aaPredicted RBP1.36□□□□□ -2.19
SHCBP1-206ENST00000567698 PLPP5Q8NEB5 264 aa1.36□□□□□ -2.19
SHCBP1-206ENST00000567698 COPS9Q8WXC6 57 aa1.36□□□□□ -2.19
SHCBP1-206ENST00000567698 NINQ8N4C6 2090 aa1.36□□□□□ -2.19
SHCBP1-206ENST00000567698 PHRF1Q9P1Y6 1649 aaKnown RBP1.36□□□□□ -2.19
SHCBP1-206ENST00000567698 MAGI1Q96QZ7 1491 aaPredicted RBP1.36□□□□□ -2.19
SHCBP1-206ENST00000567698 SPHKAPQ2M3C7 1700 aa1.35□□□□□ -2.19
SHCBP1-206ENST00000567698 THOC2Q8NI27 1593 aaKnown RBP1.35□□□□□ -2.19
SHCBP1-206ENST00000567698 IGKV3-7A0A075B6H7 116 aa1.35□□□□□ -2.19
SHCBP1-206ENST00000567698 TMEM30CPA0ZSE6 113 aa1.35□□□□□ -2.19
SHCBP1-206ENST00000567698 NUPR2A6NF83 97 aa1.35□□□□□ -2.19
SHCBP1-206ENST00000567698 H3BRM9 83 aa1.35□□□□□ -2.19
SHCBP1-206ENST00000567698 SPINK8P0C7L1 97 aa1.35□□□□□ -2.19
SHCBP1-206ENST00000567698 POLR2JP52435 117 aaKnown RBP1.35□□□□□ -2.19
SHCBP1-206ENST00000567698 UBE2G1P62253 170 aa1.35□□□□□ -2.19
SHCBP1-206ENST00000567698 FAM74A1Q5RGS3 127 aa1.35□□□□□ -2.19
SHCBP1-206ENST00000567698 S100A7L2Q5SY68 101 aa1.35□□□□□ -2.19
SHCBP1-206ENST00000567698 SPANXN1Q5VSR9 72 aa1.35□□□□□ -2.19
SHCBP1-206ENST00000567698 GTF2H5Q6ZYL4 71 aa1.35□□□□□ -2.19
SHCBP1-206ENST00000567698 TMEM141Q96I45 108 aa1.35□□□□□ -2.19
SHCBP1-206ENST00000567698 MED9Q9NWA0 146 aa1.35□□□□□ -2.19
SHCBP1-206ENST00000567698 KLK9Q9UKQ9 250 aa1.35□□□□□ -2.19
SHCBP1-206ENST00000567698 CC2D2AQ9P2K1 1620 aa1.35□□□□□ -2.19
SHCBP1-206ENST00000567698 GOLGA3Q08378 1498 aa1.35□□□□□ -2.19
SHCBP1-206ENST00000567698 MAPKBP1O60336 1514 aa1.35□□□□□ -2.19
SHCBP1-206ENST00000567698 ANKRD26Q9UPS8 1709 aa1.35□□□□□ -2.19
SHCBP1-206ENST00000567698 ALPK2Q86TB3 2170 aa1.34□□□□□ -2.19
SHCBP1-206ENST00000567698 FLG2Q5D862 2391 aaPredicted RBP1.34□□□□□ -2.19
SHCBP1-206ENST00000567698 UACAQ9BZF9 1416 aa1.34□□□□□ -2.19
SHCBP1-206ENST00000567698 CHD3Q12873 2000 aaKnown RBP1.34□□□□□ -2.19
SHCBP1-206ENST00000567698 UNC13CQ8NB66 2214 aa1.34□□□□□ -2.19
SHCBP1-206ENST00000567698 M0R143 59 aa1.34□□□□□ -2.19
SHCBP1-206ENST00000567698 INE1O15225 51 aa1.34□□□□□ -2.19
SHCBP1-206ENST00000567698 SNCGO76070 127 aa1.34□□□□□ -2.19
SHCBP1-206ENST00000567698 PPYP01298 95 aa1.34□□□□□ -2.19
SHCBP1-206ENST00000567698 GYPBP06028 91 aa1.34□□□□□ -2.19
SHCBP1-206ENST00000567698 IFITM1P13164 125 aa1.34□□□□□ -2.19
SHCBP1-206ENST00000567698 PKIAP61925 76 aa1.34□□□□□ -2.19
SHCBP1-206ENST00000567698 RBM3P98179 157 aaKnown RBP1.34□□□□□ -2.19
SHCBP1-206ENST00000567698 IQCJQ1A5X6 159 aa1.34□□□□□ -2.19
SHCBP1-206ENST00000567698 PPDPFLQ8WWR9 84 aa1.34□□□□□ -2.19
SHCBP1-206ENST00000567698 SNHG12Q9BXW3 62 aa1.34□□□□□ -2.19
SHCBP1-206ENST00000567698 SCP2D1Q9UJQ7 156 aa1.34□□□□□ -2.19
SHCBP1-206ENST00000567698 ARHGAP35Q9NRY4 1499 aa1.34□□□□□ -2.19
SHCBP1-206ENST00000567698 MAP3K1Q13233 1512 aa1.34□□□□□ -2.2
SHCBP1-206ENST00000567698 COL6A6A6NMZ7 2263 aa1.33□□□□□ -2.2
SHCBP1-206ENST00000567698 SHROOM2Q13796 1616 aa1.33□□□□□ -2.2
SHCBP1-206ENST00000567698 MED14O60244 1454 aa1.33□□□□□ -2.2
SHCBP1-206ENST00000567698 FYCO1Q9BQS8 1478 aa1.33□□□□□ -2.2
SHCBP1-206ENST00000567698 FANCD2Q9BXW9 1451 aa1.33□□□□□ -2.2
SHCBP1-206ENST00000567698 LOC110117498A0A087WWA1 95 aa1.33□□□□□ -2.2
SHCBP1-206ENST00000567698 JMJD7-PLA2G4BH0Y9G9 81 aa1.33□□□□□ -2.2
SHCBP1-206ENST00000567698 M0R2N4 97 aa1.33□□□□□ -2.2
SHCBP1-206ENST00000567698 HCRTO43612 131 aa1.33□□□□□ -2.2
SHCBP1-206ENST00000567698 MRPS14O60783 128 aaKnown RBP1.33□□□□□ -2.2
SHCBP1-206ENST00000567698 IGHV3-30P01768 117 aa1.33□□□□□ -2.2
SHCBP1-206ENST00000567698 IGHV3-30-5P0DP03 117 aa1.33□□□□□ -2.2
SHCBP1-206ENST00000567698 PDE6GP18545 87 aa1.33□□□□□ -2.2
SHCBP1-206ENST00000567698 KRTAP10-4P60372 401 aaPredicted RBP1.33□□□□□ -2.2
SHCBP1-206ENST00000567698 S100A10P60903 97 aa1.33□□□□□ -2.2
SHCBP1-206ENST00000567698 NPC2P61916 151 aa1.33□□□□□ -2.2
SHCBP1-206ENST00000567698 MPV17LQ2QL34 196 aa1.33□□□□□ -2.2
SHCBP1-206ENST00000567698 C9orf116Q5BN46 136 aaPredicted RBP1.33□□□□□ -2.2
SHCBP1-206ENST00000567698 SLC48A1Q6P1K1 146 aa1.33□□□□□ -2.2
SHCBP1-206ENST00000567698 UNQ5815/PRO19632Q6UWF5 114 aa1.33□□□□□ -2.2
SHCBP1-206ENST00000567698 TTC9CQ8N5M4 171 aa1.33□□□□□ -2.2
SHCBP1-206ENST00000567698 LCN9Q8WX39 176 aa1.33□□□□□ -2.2
SHCBP1-206ENST00000567698 IFI27L1Q96BM0 104 aa1.33□□□□□ -2.2
SHCBP1-206ENST00000567698 MRPL36Q9P0J6 103 aaKnown RBP1.33□□□□□ -2.2
SHCBP1-206ENST00000567698 C22orf24Q9Y442 160 aa1.33□□□□□ -2.2
SHCBP1-206ENST00000567698 V9GYS6 101 aa1.33□□□□□ -2.2
SHCBP1-206ENST00000567698 ABCC2Q92887 1545 aa1.33□□□□□ -2.2
SHCBP1-206ENST00000567698 PATJQ8NI35 1801 aa1.33□□□□□ -2.2
SHCBP1-206ENST00000567698 ARFGEF3Q5TH69 2177 aa1.32□□□□□ -2.2
SHCBP1-206ENST00000567698 ZNF142P52746 1687 aaPredicted RBP1.32□□□□□ -2.2
SHCBP1-206ENST00000567698 CCDC88BA6NC98 1476 aa1.32□□□□□ -2.2
SHCBP1-206ENST00000567698 MYO18AQ92614 2054 aaKnown RBP1.32□□□□□ -2.2
SHCBP1-206ENST00000567698 ABCA10Q8WWZ4 1543 aa1.32□□□□□ -2.2
SHCBP1-206ENST00000567698 PIPP12273 146 aaPredicted RBP1.32□□□□□ -2.2
SHCBP1-206ENST00000567698 SVBPQ8N300 66 aa1.32□□□□□ -2.2
SHCBP1-206ENST00000567698 C10orf82Q8WW14 230 aa1.32□□□□□ -2.2
SHCBP1-206ENST00000567698 WFDC10AQ9H1F0 79 aa1.32□□□□□ -2.2
SHCBP1-206ENST00000567698 DPH3P1Q9H4G8 78 aa1.32□□□□□ -2.2
SHCBP1-206ENST00000567698 BAZ1AQ9NRL2 1556 aaPredicted RBP1.32□□□□□ -2.2
SHCBP1-206ENST00000567698 INO80Q9ULG1 1556 aaPredicted RBP1.32□□□□□ -2.2
SHCBP1-206ENST00000567698 DOCK1Q14185 1865 aa1.32□□□□□ -2.2
SHCBP1-206ENST00000567698 ARAP2Q8WZ64 1704 aa1.32□□□□□ -2.2
SHCBP1-206ENST00000567698 DAPK1P53355 1430 aa1.32□□□□□ -2.2
SHCBP1-206ENST00000567698 CASKIN1Q8WXD9 1431 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms