RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 LINC00694P0DN24 101 aa9.54□□□□□ -0.88
COMMD4-216ENST00000567023 KRTAP10-1P60331 282 aa9.54□□□□□ -0.88
COMMD4-216ENST00000567023 LAGE3Q14657 143 aa9.54□□□□□ -0.88
COMMD4-216ENST00000567023 EPM2AB3EWF7 344 aa9.53□□□□□ -0.88
COMMD4-216ENST00000567023 B4DEV8 164 aa9.53□□□□□ -0.88
COMMD4-216ENST00000567023 PSCAO43653 123 aa9.53□□□□□ -0.88
COMMD4-216ENST00000567023 GCSHP23434 173 aa9.53□□□□□ -0.88
COMMD4-216ENST00000567023 ZNF674Q2M3X9 581 aa9.53□□□□□ -0.88
COMMD4-216ENST00000567023 DMRTA1Q5VZB9 504 aa9.53□□□□□ -0.88
COMMD4-216ENST00000567023 ALKAL2Q6UX46 152 aa9.53□□□□□ -0.88
COMMD4-216ENST00000567023 MLST8Q9BVC4 326 aa9.53□□□□□ -0.88
COMMD4-216ENST00000567023 VPS13BQ7Z7G8 4022 aa9.52□□□□□ -0.89
COMMD4-216ENST00000567023 SH2D1AO60880 128 aa9.52□□□□□ -0.89
COMMD4-216ENST00000567023 BCL2P10415 239 aa9.52□□□□□ -0.89
COMMD4-216ENST00000567023 MEF2BQ02080 365 aaPredicted RBP9.52□□□□□ -0.89
COMMD4-216ENST00000567023 FAM162BQ5T6X4 162 aa9.52□□□□□ -0.89
COMMD4-216ENST00000567023 NTN5Q8WTR8 489 aaPredicted RBP9.52□□□□□ -0.89
COMMD4-216ENST00000567023 SAMD10Q9BYL1 202 aa9.52□□□□□ -0.89
COMMD4-216ENST00000567023 DNAH8Q96JB1 4490 aa9.51□□□□□ -0.89
COMMD4-216ENST00000567023 IFNA1P01562 189 aa9.51□□□□□ -0.89
COMMD4-216ENST00000567023 ARMS2P0C7Q2 107 aa9.51□□□□□ -0.89
COMMD4-216ENST00000567023 TAGLN2P37802 199 aaKnown RBP9.51□□□□□ -0.89
COMMD4-216ENST00000567023 RPL35P42766 123 aaKnown RBP9.51□□□□□ -0.89
COMMD4-216ENST00000567023 SYT8Q8NBV8 401 aa9.51□□□□□ -0.89
COMMD4-216ENST00000567023 LYPD6BQ8NI32 183 aa9.51□□□□□ -0.89
COMMD4-216ENST00000567023 JPT2Q9H910 190 aa9.51□□□□□ -0.89
COMMD4-216ENST00000567023 Q9UF83 564 aa9.51□□□□□ -0.89
COMMD4-216ENST00000567023 A0A087WWC5 75 aa9.5□□□□□ -0.89
COMMD4-216ENST00000567023 GAGE12JA6NER3 117 aa9.5□□□□□ -0.89
COMMD4-216ENST00000567023 H3BVH4 76 aa9.5□□□□□ -0.89
COMMD4-216ENST00000567023 RHODO00212 210 aa9.5□□□□□ -0.89
COMMD4-216ENST00000567023 PDE6DO43924 150 aa9.5□□□□□ -0.89
COMMD4-216ENST00000567023 IGHV3-30P01768 117 aa9.5□□□□□ -0.89
COMMD4-216ENST00000567023 IGHV3-33P01772 117 aa9.5□□□□□ -0.89
COMMD4-216ENST00000567023 IGHV3-30-3P0DP02 117 aa9.5□□□□□ -0.89
COMMD4-216ENST00000567023 IGHV3-30-5P0DP03 117 aa9.5□□□□□ -0.89
COMMD4-216ENST00000567023 BLOC1S1P78537 153 aa9.5□□□□□ -0.89
COMMD4-216ENST00000567023 GAGE1Q13065 139 aa9.5□□□□□ -0.89
COMMD4-216ENST00000567023 GAGE4Q13068 117 aa9.5□□□□□ -0.89
COMMD4-216ENST00000567023 GAGE5Q13069 117 aa9.5□□□□□ -0.89
COMMD4-216ENST00000567023 LINC01559Q495D7 138 aa9.5□□□□□ -0.89
COMMD4-216ENST00000567023 GAGE13Q4V321 117 aa9.5□□□□□ -0.89
COMMD4-216ENST00000567023 BAGE2Q86Y30 109 aa9.5□□□□□ -0.89
COMMD4-216ENST00000567023 C14orf178Q8N769 122 aaPredicted RBP9.5□□□□□ -0.89
COMMD4-216ENST00000567023 Q8N814 137 aa9.5□□□□□ -0.89
COMMD4-216ENST00000567023 DERL1Q9BUN8 251 aa9.5□□□□□ -0.89
COMMD4-216ENST00000567023 M0R036 132 aa9.49□□□□□ -0.89
COMMD4-216ENST00000567023 SFRP2Q96HF1 295 aa9.49□□□□□ -0.89
COMMD4-216ENST00000567023 TM2D2Q9BX73 214 aa9.49□□□□□ -0.89
COMMD4-216ENST00000567023 Q9HAA7 133 aa9.49□□□□□ -0.89
COMMD4-216ENST00000567023 VAX2Q9UIW0 290 aa9.49□□□□□ -0.89
COMMD4-216ENST00000567023 IGLV5-52A0A0A0MRZ9 124 aa9.48□□□□□ -0.89
COMMD4-216ENST00000567023 TRAV8-3A0A0A6YYJ7 113 aa9.48□□□□□ -0.89
COMMD4-216ENST00000567023 GRIFINA4D1Z8 144 aa9.48□□□□□ -0.89
COMMD4-216ENST00000567023 TMEM70Q9BUB7 260 aa9.48□□□□□ -0.89
COMMD4-216ENST00000567023 PHLDA3Q9Y5J5 127 aa9.48□□□□□ -0.89
COMMD4-216ENST00000567023 HERC1Q15751 4861 aa9.48□□□□□ -0.89
COMMD4-216ENST00000567023 Q8N3U1 123 aa9.47□□□□□ -0.89
COMMD4-216ENST00000567023 TRBV10-1A0A0K0K1A3 114 aa9.46□□□□□ -0.9
COMMD4-216ENST00000567023 IGLV2-8P01709 118 aa9.46□□□□□ -0.9
COMMD4-216ENST00000567023 CENPWQ5EE01 88 aa9.46□□□□□ -0.9
COMMD4-216ENST00000567023 TOR2AQ5JU69 321 aa9.46□□□□□ -0.9
COMMD4-216ENST00000567023 ZFP82Q8N141 532 aa9.46□□□□□ -0.9
COMMD4-216ENST00000567023 FRZBQ92765 325 aa9.46□□□□□ -0.9
COMMD4-216ENST00000567023 SMIM12Q96EX1 92 aa9.46□□□□□ -0.9
COMMD4-216ENST00000567023 TRBV20OR9-2A0A075B6H5 130 aa9.45□□□□□ -0.9
COMMD4-216ENST00000567023 A0A087WWL8 130 aa9.45□□□□□ -0.9
COMMD4-216ENST00000567023 RAB19A4D1S5 217 aa9.45□□□□□ -0.9
COMMD4-216ENST00000567023 M0R381 172 aa9.45□□□□□ -0.9
COMMD4-216ENST00000567023 CXCL1P09341 107 aa9.45□□□□□ -0.9
COMMD4-216ENST00000567023 FAM74A4Q5TZK3 123 aa9.45□□□□□ -0.9
COMMD4-216ENST00000567023 Q5VSD8 79 aa9.45□□□□□ -0.9
COMMD4-216ENST00000567023 DAZ4Q86SG3 579 aaKnown RBP9.45□□□□□ -0.9
COMMD4-216ENST00000567023 DAZ3Q9NR90 486 aaKnown RBP9.45□□□□□ -0.9
COMMD4-216ENST00000567023 MED9Q9NWA0 146 aa9.45□□□□□ -0.9
COMMD4-216ENST00000567023 MYCBP2O75592 4640 aa9.44□□□□□ -0.9
COMMD4-216ENST00000567023 SRRM2Q9UQ35 2752 aaKnown RBP9.44□□□□□ -0.9
COMMD4-216ENST00000567023 TMSB15BA0A087X1C1 80 aa9.44□□□□□ -0.9
COMMD4-216ENST00000567023 RBFOX3A6NFN3 312 aa9.44□□□□□ -0.9
COMMD4-216ENST00000567023 GNG4P50150 75 aa9.44□□□□□ -0.9
COMMD4-216ENST00000567023 NIT1Q86X76 327 aa9.44□□□□□ -0.9
COMMD4-216ENST00000567023 COX11Q9Y6N1 276 aa9.44□□□□□ -0.9
COMMD4-216ENST00000567023 TRBV7-3A0A075B6L6 115 aa9.43□□□□□ -0.9
COMMD4-216ENST00000567023 TMEM250H0YL14 139 aa9.43□□□□□ -0.9
COMMD4-216ENST00000567023 NDUFS6O75380 124 aaKnown RBP9.43□□□□□ -0.9
COMMD4-216ENST00000567023 INAFM2P0DMQ5 153 aa9.43□□□□□ -0.9
COMMD4-216ENST00000567023 RPL19P84098 196 aaKnown RBP9.43□□□□□ -0.9
COMMD4-216ENST00000567023 WFDC2Q14508 124 aa9.43□□□□□ -0.9
COMMD4-216ENST00000567023 PRR27Q6MZM9 219 aa9.43□□□□□ -0.9
COMMD4-216ENST00000567023 TEX261Q6UWH6 196 aa9.43□□□□□ -0.9
COMMD4-216ENST00000567023 CHCHD7Q9BUK0 85 aa9.43□□□□□ -0.9
COMMD4-216ENST00000567023 SSBP4Q9BWG4 385 aaPredicted RBP9.43□□□□□ -0.9
COMMD4-216ENST00000567023 C19orf71A6NCJ1 209 aa9.42□□□□□ -0.9
COMMD4-216ENST00000567023 SMR3BP02814 79 aaPredicted RBP9.42□□□□□ -0.9
COMMD4-216ENST00000567023 RAB4BP61018 213 aa9.42□□□□□ -0.9
COMMD4-216ENST00000567023 UBE2D3P61077 147 aa9.42□□□□□ -0.9
COMMD4-216ENST00000567023 UBE2D2P62837 147 aa9.42□□□□□ -0.9
COMMD4-216ENST00000567023 RPL36AP83881 106 aaKnown RBP9.42□□□□□ -0.9
COMMD4-216ENST00000567023 OR10G8Q8NGN5 311 aa9.42□□□□□ -0.9
COMMD4-216ENST00000567023 RPL36ALQ969Q0 106 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms