RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 LINC01559Q495D7 138 aa12.17□□□□□ -0.46
USB1-213ENST00000566292 FAM74A4Q5TZK3 123 aa12.17□□□□□ -0.46
USB1-213ENST00000566292 DAZ4Q86SG3 579 aaKnown RBP12.17□□□□□ -0.46
USB1-213ENST00000566292 FRZBQ92765 325 aa12.17□□□□□ -0.46
USB1-213ENST00000566292 SFRP2Q96HF1 295 aa12.17□□□□□ -0.46
USB1-213ENST00000566292 TCEAL7Q9BRU2 100 aa12.17□□□□□ -0.46
USB1-213ENST00000566292 DAZ3Q9NR90 486 aaKnown RBP12.17□□□□□ -0.46
USB1-213ENST00000566292 A0A087WWL8 130 aa12.16□□□□□ -0.46
USB1-213ENST00000566292 INAFM2P0DMQ5 153 aa12.16□□□□□ -0.46
USB1-213ENST00000566292 AKR1C3P42330 323 aa12.16□□□□□ -0.46
USB1-213ENST00000566292 KCNRGQ8N5I3 272 aa12.16□□□□□ -0.46
USB1-213ENST00000566292 STOML3Q8TAV4 291 aa12.16□□□□□ -0.46
USB1-213ENST00000566292 TM2D2Q9BX73 214 aa12.16□□□□□ -0.46
USB1-213ENST00000566292 PHLDA3Q9Y5J5 127 aa12.16□□□□□ -0.46
USB1-213ENST00000566292 M0R381 172 aa12.15□□□□□ -0.46
USB1-213ENST00000566292 PAGE4O60829 102 aa12.15□□□□□ -0.46
USB1-213ENST00000566292 TPT1P13693 172 aaKnown RBP12.15□□□□□ -0.46
USB1-213ENST00000566292 TMEM70Q9BUB7 260 aa12.15□□□□□ -0.46
USB1-213ENST00000566292 SRRM2Q9UQ35 2752 aaKnown RBP12.15□□□□□ -0.46
USB1-213ENST00000566292 A0A087WWC5 75 aa12.14□□□□□ -0.47
USB1-213ENST00000566292 ZNF345Q14585 488 aa12.14□□□□□ -0.47
USB1-213ENST00000566292 FAM30AQ9NZY2 134 aa12.14□□□□□ -0.47
USB1-213ENST00000566292 TRAV8-3A0A0A6YYJ7 113 aa12.13□□□□□ -0.47
USB1-213ENST00000566292 SEC11BP0C7V7 166 aa12.13□□□□□ -0.47
USB1-213ENST00000566292 ZFP82Q8N141 532 aa12.13□□□□□ -0.47
USB1-213ENST00000566292 SFT2D1Q8WV19 159 aa12.13□□□□□ -0.47
USB1-213ENST00000566292 MBD3L1Q8WWY6 194 aa12.13□□□□□ -0.47
USB1-213ENST00000566292 A0A1B0GV50 99 aa12.12□□□□□ -0.47
USB1-213ENST00000566292 SCO2A0A1W2PP80 73 aa12.12□□□□□ -0.47
USB1-213ENST00000566292 NIT1Q86X76 327 aa12.12□□□□□ -0.47
USB1-213ENST00000566292 FAM213BQ8TBF2 198 aa12.12□□□□□ -0.47
USB1-213ENST00000566292 DMBT1Q9UGM3 2413 aaPredicted RBP12.11□□□□□ -0.47
USB1-213ENST00000566292 HERC1Q15751 4861 aa12.11□□□□□ -0.47
USB1-213ENST00000566292 FLG2Q5D862 2391 aaPredicted RBP12.11□□□□□ -0.47
USB1-213ENST00000566292 LECT2O14960 151 aa12.11□□□□□ -0.47
USB1-213ENST00000566292 RPL19P84098 196 aaKnown RBP12.11□□□□□ -0.47
USB1-213ENST00000566292 TOR2AQ5JU69 321 aa12.11□□□□□ -0.47
USB1-213ENST00000566292 DNAJC30Q96LL9 226 aa12.11□□□□□ -0.47
USB1-213ENST00000566292 HMSDA8MTL9 139 aa12.1□□□□□ -0.47
USB1-213ENST00000566292 UMAD1C9J7I0 102 aa12.1□□□□□ -0.47
USB1-213ENST00000566292 MLST8Q9BVC4 326 aa12.1□□□□□ -0.47
USB1-213ENST00000566292 MYCBP2O75592 4640 aa12.09□□□□□ -0.47
USB1-213ENST00000566292 TRBV10-1A0A0K0K1A3 114 aa12.09□□□□□ -0.47
USB1-213ENST00000566292 S100A9P06702 114 aaKnown RBP12.09□□□□□ -0.47
USB1-213ENST00000566292 UBE2D3P61077 147 aa12.09□□□□□ -0.47
USB1-213ENST00000566292 UBE2D2P62837 147 aa12.09□□□□□ -0.47
USB1-213ENST00000566292 OR10AG1Q8NH19 301 aa12.09□□□□□ -0.47
USB1-213ENST00000566292 ZNF471Q9BX82 626 aaPredicted RBP12.09□□□□□ -0.47
USB1-213ENST00000566292 TRBV7-3A0A075B6L6 115 aa12.08□□□□□ -0.48
USB1-213ENST00000566292 A0A0D9SG52 128 aa12.08□□□□□ -0.48
USB1-213ENST00000566292 BCL2L11O43521 198 aa12.08□□□□□ -0.48
USB1-213ENST00000566292 C1QBP02746 253 aa12.08□□□□□ -0.48
USB1-213ENST00000566292 RPL36AP83881 106 aaKnown RBP12.08□□□□□ -0.48
USB1-213ENST00000566292 BAALCQ8WXS3 180 aa12.08□□□□□ -0.48
USB1-213ENST00000566292 RPL36ALQ969Q0 106 aaKnown RBP12.08□□□□□ -0.48
USB1-213ENST00000566292 KLK12Q9UKR0 248 aa12.08□□□□□ -0.48
USB1-213ENST00000566292 URGCP-MRPS24S4R325 110 aa12.08□□□□□ -0.48
USB1-213ENST00000566292 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.07□□□□□ -0.48
USB1-213ENST00000566292 FAM229AH3BQW9 127 aa12.07□□□□□ -0.48
USB1-213ENST00000566292 PFDN1O60925 122 aa12.07□□□□□ -0.48
USB1-213ENST00000566292 CXCL1P09341 107 aa12.07□□□□□ -0.48
USB1-213ENST00000566292 BAGE2Q86Y30 109 aa12.07□□□□□ -0.48
USB1-213ENST00000566292 OR10G8Q8NGN5 311 aa12.07□□□□□ -0.48
USB1-213ENST00000566292 KANTRA0A1W2PQU2 76 aa12.06□□□□□ -0.48
USB1-213ENST00000566292 SNAI2O43623 268 aa12.06□□□□□ -0.48
USB1-213ENST00000566292 H2AFB1P0C5Y9 115 aa12.06□□□□□ -0.48
USB1-213ENST00000566292 Q6ZSA8 131 aa12.06□□□□□ -0.48
USB1-213ENST00000566292 SSBP4Q9BWG4 385 aaPredicted RBP12.06□□□□□ -0.48
USB1-213ENST00000566292 COX11Q9Y6N1 276 aa12.06□□□□□ -0.48
USB1-213ENST00000566292 IGKV2D-24A0A075B6R9 120 aa12.05□□□□□ -0.48
USB1-213ENST00000566292 MUC21A0A0G2JKD1 596 aa12.05□□□□□ -0.48
USB1-213ENST00000566292 MUC21A0A140T8X8 626 aa12.05□□□□□ -0.48
USB1-213ENST00000566292 RAB4BP61018 213 aa12.05□□□□□ -0.48
USB1-213ENST00000566292 PRR27Q6MZM9 219 aa12.05□□□□□ -0.48
USB1-213ENST00000566292 NEXN-AS1Q8NBZ9 246 aa12.05□□□□□ -0.48
USB1-213ENST00000566292 RMI2Q96E14 147 aa12.05□□□□□ -0.48
USB1-213ENST00000566292 CHCHD7Q9BUK0 85 aa12.05□□□□□ -0.48
USB1-213ENST00000566292 A0A087WX48 190 aa12.04□□□□□ -0.48
USB1-213ENST00000566292 ZNF56Q15929 161 aa12.04□□□□□ -0.48
USB1-213ENST00000566292 TMUB2Q71RG4 321 aa12.04□□□□□ -0.48
USB1-213ENST00000566292 UBE2WQ96B02 151 aa12.04□□□□□ -0.48
USB1-213ENST00000566292 OR5AL1P0C617 328 aa12.03□□□□□ -0.48
USB1-213ENST00000566292 LINC01620Q4KN68 170 aa12.03□□□□□ -0.48
USB1-213ENST00000566292 TRBV6-8A0A0A6YYG3 113 aa12.02□□□□□ -0.49
USB1-213ENST00000566292 RPL35P42766 123 aaKnown RBP12.02□□□□□ -0.49
USB1-213ENST00000566292 EIF5AP63241 154 aaKnown RBP12.02□□□□□ -0.49
USB1-213ENST00000566292 CCL20P78556 96 aa12.02□□□□□ -0.49
USB1-213ENST00000566292 ATRAIDQ6UW56 229 aa12.02□□□□□ -0.49
USB1-213ENST00000566292 DERL1Q9BUN8 251 aa12.02□□□□□ -0.49
USB1-213ENST00000566292 ELOBQ15370 118 aa12.01□□□□□ -0.49
USB1-213ENST00000566292 SPANXN1Q5VSR9 72 aa12.01□□□□□ -0.49
USB1-213ENST00000566292 Q8N976 141 aa12.01□□□□□ -0.49
USB1-213ENST00000566292 SSTP61278 116 aa12□□□□□ -0.49
USB1-213ENST00000566292 KCNIP4Q6PIL6 250 aa12□□□□□ -0.49
USB1-213ENST00000566292 C11orf52Q96A22 123 aa12□□□□□ -0.49
USB1-213ENST00000566292 MANBALQ9NQG1 85 aa12□□□□□ -0.49
USB1-213ENST00000566292 GNG13Q9P2W3 67 aa12□□□□□ -0.49
USB1-213ENST00000566292 KIF25-AS1Q9Y6Z4 181 aa12□□□□□ -0.49
USB1-213ENST00000566292 RBFOX3A6NFN3 312 aa11.99□□□□□ -0.49
USB1-213ENST00000566292 TMEM262E9PQX1 116 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms