RNA–Protein interactions for RNA: ENST00000566279.5

TCF4-231, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-231ENST00000566279 AMTNQ6UX39 209 aa7.49□□□□□ -1.21
TCF4-231ENST00000566279 OR2K2Q8NGT1 345 aa7.49□□□□□ -1.21
TCF4-231ENST00000566279 MIEN1Q9BRT3 115 aa7.49□□□□□ -1.21
TCF4-231ENST00000566279 MAP1LC3CQ9BXW4 147 aa7.49□□□□□ -1.21
TCF4-231ENST00000566279 TRAV12-2A0A075B6T6 113 aa7.49□□□□□ -1.21
TCF4-231ENST00000566279 IGLL1P15814 213 aa7.49□□□□□ -1.21
TCF4-231ENST00000566279 OXLD1Q5BKU9 147 aa7.49□□□□□ -1.21
TCF4-231ENST00000566279 PET117Q6UWS5 81 aa7.49□□□□□ -1.21
TCF4-231ENST00000566279 FAM159AQ6UWV7 190 aa7.49□□□□□ -1.21
TCF4-231ENST00000566279 TRAV9-2A0A087WT02 112 aa7.48□□□□□ -1.21
TCF4-231ENST00000566279 KNCNA6PVL3 124 aa7.48□□□□□ -1.21
TCF4-231ENST00000566279 HBDP02042 147 aa7.48□□□□□ -1.21
TCF4-231ENST00000566279 TSPOP30536 169 aa7.48□□□□□ -1.21
TCF4-231ENST00000566279 FXYD7P58549 80 aa7.48□□□□□ -1.21
TCF4-231ENST00000566279 SPINK13Q1W4C9 94 aa7.48□□□□□ -1.21
TCF4-231ENST00000566279 DEFB114Q30KQ6 69 aa7.48□□□□□ -1.21
TCF4-231ENST00000566279 DEFB125Q8N687 156 aa7.48□□□□□ -1.21
TCF4-231ENST00000566279 DYNLRB2Q8TF09 96 aa7.48□□□□□ -1.21
TCF4-231ENST00000566279 MRAP2Q96G30 205 aa7.48□□□□□ -1.21
TCF4-231ENST00000566279 NXT2Q9NPJ8 142 aaKnown RBP7.48□□□□□ -1.21
TCF4-231ENST00000566279 IGLV2-18A0A075B6J9 118 aa7.48□□□□□ -1.21
TCF4-231ENST00000566279 C20orf202A1L168 122 aa7.48□□□□□ -1.21
TCF4-231ENST00000566279 OR4C46A6NHA9 309 aa7.48□□□□□ -1.21
TCF4-231ENST00000566279 G3V4G9 280 aa7.48□□□□□ -1.21
TCF4-231ENST00000566279 DEFB131AP59861 70 aa7.48□□□□□ -1.21
TCF4-231ENST00000566279 ZNF705AQ6ZN79 300 aaPredicted RBP7.48□□□□□ -1.21
TCF4-231ENST00000566279 DPH3P1Q9H4G8 78 aa7.48□□□□□ -1.21
TCF4-231ENST00000566279 PRSS47A8MTI9 375 aa7.47□□□□□ -1.21
TCF4-231ENST00000566279 A8MTW9 85 aa7.47□□□□□ -1.21
TCF4-231ENST00000566279 CD7P09564 240 aa7.47□□□□□ -1.21
TCF4-231ENST00000566279 LINC01545Q5VT33 79 aa7.47□□□□□ -1.21
TCF4-231ENST00000566279 C14orf178Q8N769 122 aaPredicted RBP7.47□□□□□ -1.21
TCF4-231ENST00000566279 Q8N8P6 123 aa7.47□□□□□ -1.21
TCF4-231ENST00000566279 MCRIP2Q9BUT9 160 aaKnown RBP7.47□□□□□ -1.21
TCF4-231ENST00000566279 IGHV3-16A0A0C4DH30 117 aa7.46□□□□□ -1.21
TCF4-231ENST00000566279 K7EP13 123 aa7.46□□□□□ -1.21
TCF4-231ENST00000566279 IGLC3P0DOY3 106 aa7.46□□□□□ -1.21
TCF4-231ENST00000566279 HLA-DRB4P13762 266 aa7.46□□□□□ -1.21
TCF4-231ENST00000566279 CD300EQ496F6 205 aaPredicted RBP7.46□□□□□ -1.21
TCF4-231ENST00000566279 AP1S3Q96PC3 154 aa7.46□□□□□ -1.21
TCF4-231ENST00000566279 HLA-DRB4X5D2U9 266 aa7.46□□□□□ -1.21
TCF4-231ENST00000566279 RBMY1BA6NDE4 496 aaKnown RBP7.46□□□□□ -1.22
TCF4-231ENST00000566279 RBMY1EA6NEQ0 496 aaKnown RBP7.46□□□□□ -1.22
TCF4-231ENST00000566279 H0Y8G0 127 aa7.46□□□□□ -1.22
TCF4-231ENST00000566279 H3BMM0 161 aa7.46□□□□□ -1.22
TCF4-231ENST00000566279 RBMY1DP0C7P1 496 aaKnown RBP7.46□□□□□ -1.22
TCF4-231ENST00000566279 POM121L12Q8N7R1 296 aa7.46□□□□□ -1.22
TCF4-231ENST00000566279 RNASE8Q8TDE3 154 aaKnown RBP7.46□□□□□ -1.22
TCF4-231ENST00000566279 C9orf85Q96MD7 179 aa7.46□□□□□ -1.22
TCF4-231ENST00000566279 MAP6D1Q9H9H5 199 aa7.46□□□□□ -1.22
TCF4-231ENST00000566279 KIF25-AS1Q9Y6Z4 181 aa7.46□□□□□ -1.22
TCF4-231ENST00000566279 IGHV1OR15-1A0A075B7D0 117 aa7.45□□□□□ -1.22
TCF4-231ENST00000566279 CIDEAO60543 219 aa7.45□□□□□ -1.22
TCF4-231ENST00000566279 Q8N1Y9 231 aa7.45□□□□□ -1.22
TCF4-231ENST00000566279 RASL10AQ92737 203 aa7.45□□□□□ -1.22
TCF4-231ENST00000566279 MGPP08493 103 aa7.45□□□□□ -1.22
TCF4-231ENST00000566279 RBMY1A1P0DJD3 496 aaKnown RBP7.45□□□□□ -1.22
TCF4-231ENST00000566279 RBMY1CP0DJD4 496 aa7.45□□□□□ -1.22
TCF4-231ENST00000566279 FCER1GP30273 86 aa7.45□□□□□ -1.22
TCF4-231ENST00000566279 LINC00315P59091 139 aa7.45□□□□□ -1.22
TCF4-231ENST00000566279 RBMY1FQ15415 496 aaKnown RBP7.45□□□□□ -1.22
TCF4-231ENST00000566279 SPAG8Q99932 426 aaPredicted RBP7.45□□□□□ -1.22
TCF4-231ENST00000566279 PMCHL2Q9BQD1 86 aa7.45□□□□□ -1.22
TCF4-231ENST00000566279 MDFICQ9P1T7 246 aa7.45□□□□□ -1.22
TCF4-231ENST00000566279 UQCR10Q9UDW1 63 aa7.45□□□□□ -1.22
TCF4-231ENST00000566279 ZNF256Q9Y2P7 627 aaPredicted RBP7.45□□□□□ -1.22
TCF4-231ENST00000566279 hDV102S1A0JD36 115 aa7.44□□□□□ -1.22
TCF4-231ENST00000566279 SAP30O75446 220 aa7.44□□□□□ -1.22
TCF4-231ENST00000566279 PRB2P02812 416 aaPredicted RBP7.44□□□□□ -1.22
TCF4-231ENST00000566279 WFDC9Q8NEX5 89 aa7.44□□□□□ -1.22
TCF4-231ENST00000566279 IFI27L1Q96BM0 104 aa7.44□□□□□ -1.22
TCF4-231ENST00000566279 RPL39LQ96EH5 51 aaKnown RBP7.44□□□□□ -1.22
TCF4-231ENST00000566279 TRAV25A0A0B4J276 109 aa7.43□□□□□ -1.22
TCF4-231ENST00000566279 SMIM2Q9BVW6 85 aa7.43□□□□□ -1.22
TCF4-231ENST00000566279 JPT2Q9H910 190 aa7.43□□□□□ -1.22
TCF4-231ENST00000566279 HSBP1L1C9JCN9 74 aa7.43□□□□□ -1.22
TCF4-231ENST00000566279 COL5A1-AS1Q5SY13 56 aa7.43□□□□□ -1.22
TCF4-231ENST00000566279 C20orf78Q9BR46 151 aa7.43□□□□□ -1.22
TCF4-231ENST00000566279 ST20Q9HBF5 79 aa7.43□□□□□ -1.22
TCF4-231ENST00000566279 SUMO2P61956 95 aaKnown RBP7.42□□□□□ -1.22
TCF4-231ENST00000566279 LAGE3Q14657 143 aa7.42□□□□□ -1.22
TCF4-231ENST00000566279 LGALS9BQ3B8N2 356 aa7.42□□□□□ -1.22
TCF4-231ENST00000566279 LGALS9CQ6DKI2 356 aa7.42□□□□□ -1.22
TCF4-231ENST00000566279 C18orf15Q96N68 181 aa7.42□□□□□ -1.22
TCF4-231ENST00000566279 NBEAL1Q6ZS30 2694 aa7.42□□□□□ -1.22
TCF4-231ENST00000566279 TRGV11A0A075B6L2 103 aa7.42□□□□□ -1.22
TCF4-231ENST00000566279 A0A087WWL8 130 aa7.42□□□□□ -1.22
TCF4-231ENST00000566279 SMIM17P0DL12 118 aa7.42□□□□□ -1.22
TCF4-231ENST00000566279 ODF3L2Q3SX64 289 aa7.42□□□□□ -1.22
TCF4-231ENST00000566279 SAMD5Q5TGI4 173 aa7.42□□□□□ -1.22
TCF4-231ENST00000566279 Q6ZN92 141 aa7.42□□□□□ -1.22
TCF4-231ENST00000566279 KRTAP10-11P60412 298 aa7.41□□□□□ -1.22
TCF4-231ENST00000566279 SUMO4Q6EEV6 95 aa7.41□□□□□ -1.22
TCF4-231ENST00000566279 SYT8Q8NBV8 401 aa7.41□□□□□ -1.22
TCF4-231ENST00000566279 ORAOV1Q8WV07 137 aa7.41□□□□□ -1.22
TCF4-231ENST00000566279 CBY3A6NI87 242 aa7.4□□□□□ -1.22
TCF4-231ENST00000566279 PPP1R17O96001 155 aa7.4□□□□□ -1.22
TCF4-231ENST00000566279 MGAM2Q2M2H8 2515 aa7.4□□□□□ -1.22
TCF4-231ENST00000566279 HNRNPA3P51991 378 aaKnown RBP7.4□□□□□ -1.23
TCF4-231ENST00000566279 C9orf66Q5T8R8 295 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms