RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 LINC01545Q5VT33 79 aa9.18□□□□□ -0.94
SF3B3-206ENST00000565990 TMEM208Q9BTX3 173 aa9.18□□□□□ -0.94
SF3B3-206ENST00000565990 AP5S1Q9NUS5 200 aa9.18□□□□□ -0.94
SF3B3-206ENST00000565990 GOLT1BQ9Y3E0 138 aa9.18□□□□□ -0.94
SF3B3-206ENST00000565990 TRAV8-1A0A0A6YYK1 113 aa9.17□□□□□ -0.94
SF3B3-206ENST00000565990 TMEM189A5PLL7 270 aa9.17□□□□□ -0.94
SF3B3-206ENST00000565990 PPBPP02775 128 aa9.17□□□□□ -0.94
SF3B3-206ENST00000565990 FXYD7P58549 80 aa9.17□□□□□ -0.94
SF3B3-206ENST00000565990 SPINK13Q1W4C9 94 aa9.17□□□□□ -0.94
SF3B3-206ENST00000565990 FA2HQ7L5A8 372 aa9.17□□□□□ -0.94
SF3B3-206ENST00000565990 ASCL2Q99929 193 aa9.17□□□□□ -0.94
SF3B3-206ENST00000565990 OVOL2Q9BRP0 275 aa9.17□□□□□ -0.94
SF3B3-206ENST00000565990 CNFNQ9BYD5 112 aa9.17□□□□□ -0.94
SF3B3-206ENST00000565990 XCL2Q9UBD3 114 aa9.17□□□□□ -0.94
SF3B3-206ENST00000565990 SPRY2O43597 315 aa9.16□□□□□ -0.94
SF3B3-206ENST00000565990 ARMS2P0C7Q2 107 aa9.16□□□□□ -0.94
SF3B3-206ENST00000565990 LEPP41159 167 aa9.16□□□□□ -0.94
SF3B3-206ENST00000565990 FAM104BQ5XKR9 115 aa9.16□□□□□ -0.94
SF3B3-206ENST00000565990 ZFAND2AQ8N6M9 145 aa9.16□□□□□ -0.94
SF3B3-206ENST00000565990 SGK494Q96LW2 274 aa9.16□□□□□ -0.94
SF3B3-206ENST00000565990 SPATA25Q9BR10 227 aa9.16□□□□□ -0.94
SF3B3-206ENST00000565990 TRAV12-2A0A075B6T6 113 aa9.15□□□□□ -0.94
SF3B3-206ENST00000565990 CRIP1P50238 77 aa9.15□□□□□ -0.94
SF3B3-206ENST00000565990 KIR3DS1Q14943 382 aa9.15□□□□□ -0.94
SF3B3-206ENST00000565990 SLC25A34Q6PIV7 304 aa9.15□□□□□ -0.94
SF3B3-206ENST00000565990 ORMDL3Q8N138 153 aa9.15□□□□□ -0.94
SF3B3-206ENST00000565990 C1orf158Q8N1D5 194 aa9.15□□□□□ -0.94
SF3B3-206ENST00000565990 Q8TAT8 98 aa9.15□□□□□ -0.94
SF3B3-206ENST00000565990 LINC01546A6NGU7 62 aa9.14□□□□□ -0.95
SF3B3-206ENST00000565990 SH2D1AO60880 128 aa9.14□□□□□ -0.95
SF3B3-206ENST00000565990 IGLC6P0CF74 106 aa9.14□□□□□ -0.95
SF3B3-206ENST00000565990 DEFB135Q30KP9 77 aa9.14□□□□□ -0.95
SF3B3-206ENST00000565990 LGALS9BQ3B8N2 356 aa9.14□□□□□ -0.95
SF3B3-206ENST00000565990 LGALS9CQ6DKI2 356 aa9.14□□□□□ -0.95
SF3B3-206ENST00000565990 ZMAT4Q9H898 229 aa9.14□□□□□ -0.95
SF3B3-206ENST00000565990 TENM3Q9P273 2699 aa9.14□□□□□ -0.95
SF3B3-206ENST00000565990 HUWE1Q7Z6Z7 4374 aaKnown RBP9.13□□□□□ -0.95
SF3B3-206ENST00000565990 SMIM9A6NGZ8 99 aa9.13□□□□□ -0.95
SF3B3-206ENST00000565990 FABP5P3A8MUU1 101 aa9.13□□□□□ -0.95
SF3B3-206ENST00000565990 RBMY1A1P0DJD3 496 aaKnown RBP9.13□□□□□ -0.95
SF3B3-206ENST00000565990 RBMY1CP0DJD4 496 aa9.13□□□□□ -0.95
SF3B3-206ENST00000565990 RBMY1FQ15415 496 aaKnown RBP9.13□□□□□ -0.95
SF3B3-206ENST00000565990 PRR9Q5T870 116 aa9.13□□□□□ -0.95
SF3B3-206ENST00000565990 PRSS3P2Q8NHM4 247 aa9.13□□□□□ -0.95
SF3B3-206ENST00000565990 X6R8D5 127 aa9.13□□□□□ -0.95
SF3B3-206ENST00000565990 C7orf71A4D174 169 aa9.12□□□□□ -0.95
SF3B3-206ENST00000565990 INSP01308 110 aa9.12□□□□□ -0.95
SF3B3-206ENST00000565990 RNASE4P34096 147 aaKnown RBP9.12□□□□□ -0.95
SF3B3-206ENST00000565990 FER1L6-AS1Q8NA97 138 aa9.12□□□□□ -0.95
SF3B3-206ENST00000565990 OR11H2Q8NH07 326 aa9.12□□□□□ -0.95
SF3B3-206ENST00000565990 PRELID3AQ96N28 172 aa9.12□□□□□ -0.95
SF3B3-206ENST00000565990 LINC00467Q9BRT7 94 aa9.12□□□□□ -0.95
SF3B3-206ENST00000565990 SCRT2Q9NQ03 307 aa9.12□□□□□ -0.95
SF3B3-206ENST00000565990 TGP01266 2768 aa9.12□□□□□ -0.95
SF3B3-206ENST00000565990 TRAV12-3A0A0B4J271 114 aa9.11□□□□□ -0.95
SF3B3-206ENST00000565990 LYZL1Q6UWQ5 148 aa9.11□□□□□ -0.95
SF3B3-206ENST00000565990 Q6ZQT7 251 aa9.11□□□□□ -0.95
SF3B3-206ENST00000565990 STPG4Q8N801 248 aa9.11□□□□□ -0.95
SF3B3-206ENST00000565990 C8orf49Q96NF6 230 aa9.11□□□□□ -0.95
SF3B3-206ENST00000565990 RETNQ9HD89 108 aa9.11□□□□□ -0.95
SF3B3-206ENST00000565990 COX11Q9Y6N1 276 aa9.11□□□□□ -0.95
SF3B3-206ENST00000565990 PRSS47A8MTI9 375 aa9.1□□□□□ -0.95
SF3B3-206ENST00000565990 SIVA1O15304 175 aa9.1□□□□□ -0.95
SF3B3-206ENST00000565990 HBDP02042 147 aa9.1□□□□□ -0.95
SF3B3-206ENST00000565990 COX8AP10176 69 aa9.1□□□□□ -0.95
SF3B3-206ENST00000565990 MIFP14174 115 aa9.1□□□□□ -0.95
SF3B3-206ENST00000565990 G0S2P27469 103 aa9.1□□□□□ -0.95
SF3B3-206ENST00000565990 ZNF80P51504 273 aaPredicted RBP9.1□□□□□ -0.95
SF3B3-206ENST00000565990 BATFQ16520 125 aa9.1□□□□□ -0.95
SF3B3-206ENST00000565990 LINC01587Q99440 93 aa9.1□□□□□ -0.95
SF3B3-206ENST00000565990 NXT2Q9NPJ8 142 aaKnown RBP9.1□□□□□ -0.95
SF3B3-206ENST00000565990 J3KRW8 73 aa9.09□□□□□ -0.95
SF3B3-206ENST00000565990 MRPL51Q4U2R6 128 aaKnown RBP9.09□□□□□ -0.95
SF3B3-206ENST00000565990 Q8NAQ8 132 aa9.09□□□□□ -0.95
SF3B3-206ENST00000565990 IGHV4-4A0A075B6R2 117 aa9.08□□□□□ -0.96
SF3B3-206ENST00000565990 TRAV21A0A0B4J279 112 aa9.08□□□□□ -0.96
SF3B3-206ENST00000565990 D6R8Y8 96 aa9.08□□□□□ -0.96
SF3B3-206ENST00000565990 PRM2P04554 102 aa9.08□□□□□ -0.96
SF3B3-206ENST00000565990 CACNG7P62955 275 aa9.08□□□□□ -0.96
SF3B3-206ENST00000565990 SEC11AP67812 179 aa9.08□□□□□ -0.96
SF3B3-206ENST00000565990 ANXA2RQ3ZCQ2 193 aa9.08□□□□□ -0.96
SF3B3-206ENST00000565990 ATOH7Q8N100 152 aa9.08□□□□□ -0.96
SF3B3-206ENST00000565990 MAP1LC3AQ9H492 121 aa9.08□□□□□ -0.96
SF3B3-206ENST00000565990 AZU1P20160 251 aa9.07□□□□□ -0.96
SF3B3-206ENST00000565990 CKS2P33552 79 aa9.07□□□□□ -0.96
SF3B3-206ENST00000565990 UBE2V1Q13404 147 aa9.07□□□□□ -0.96
SF3B3-206ENST00000565990 ZNF575Q86XF7 245 aa9.07□□□□□ -0.96
SF3B3-206ENST00000565990 IGHV3OR16-12A0A075B7B8 117 aa9.06□□□□□ -0.96
SF3B3-206ENST00000565990 IGHV1OR15-1A0A075B7D0 117 aa9.06□□□□□ -0.96
SF3B3-206ENST00000565990 PLAC8L1A1L4L8 177 aa9.06□□□□□ -0.96
SF3B3-206ENST00000565990 MED14OSP0DP75 135 aa9.06□□□□□ -0.96
SF3B3-206ENST00000565990 HINT1P49773 126 aaPredicted RBP9.06□□□□□ -0.96
SF3B3-206ENST00000565990 RRN3P1Q2M238 152 aa9.06□□□□□ -0.96
SF3B3-206ENST00000565990 MAJINQ3KP22 176 aa9.06□□□□□ -0.96
SF3B3-206ENST00000565990 LINC00173Q6ZV60 143 aa9.06□□□□□ -0.96
SF3B3-206ENST00000565990 SMIM15Q7Z3B0 74 aa9.06□□□□□ -0.96
SF3B3-206ENST00000565990 EDA2RQ9HAV5 297 aa9.06□□□□□ -0.96
SF3B3-206ENST00000565990 A0A096LNJ9 63 aa9.05□□□□□ -0.96
SF3B3-206ENST00000565990 IGHV4-28A0A0C4DH34 117 aa9.05□□□□□ -0.96
SF3B3-206ENST00000565990 K7EMI3 77 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms