RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 HTN3P15516 51 aa5.53□□□□□ -1.52
CDH1-208ENST00000565810 CAMPP49913 170 aa5.53□□□□□ -1.52
CDH1-208ENST00000565810 HBBP68871 147 aa5.53□□□□□ -1.52
CDH1-208ENST00000565810 FAM74A4Q5TZK3 123 aa5.53□□□□□ -1.52
CDH1-208ENST00000565810 CFAP126Q5VTH2 177 aa5.53□□□□□ -1.52
CDH1-208ENST00000565810 ZFP2Q6ZN57 461 aa5.53□□□□□ -1.52
CDH1-208ENST00000565810 C14orf178Q8N769 122 aaPredicted RBP5.53□□□□□ -1.52
CDH1-208ENST00000565810 MSRB1Q9NZV6 116 aa5.53□□□□□ -1.52
CDH1-208ENST00000565810 A0A087WWL8 130 aa5.52□□□□□ -1.53
CDH1-208ENST00000565810 DEFB131BA0A096LNP1 70 aa5.52□□□□□ -1.53
CDH1-208ENST00000565810 IGHV3-73A0A0B4J1V6 119 aa5.52□□□□□ -1.53
CDH1-208ENST00000565810 TRAV10A0A0B4J240 114 aa5.52□□□□□ -1.53
CDH1-208ENST00000565810 F5H697 171 aa5.52□□□□□ -1.53
CDH1-208ENST00000565810 F5H768 121 aa5.52□□□□□ -1.53
CDH1-208ENST00000565810 MGPP08493 103 aa5.52□□□□□ -1.53
CDH1-208ENST00000565810 EVI2AP22794 236 aa5.52□□□□□ -1.53
CDH1-208ENST00000565810 RAB4BP61018 213 aa5.52□□□□□ -1.53
CDH1-208ENST00000565810 COX19Q49B96 90 aa5.52□□□□□ -1.53
CDH1-208ENST00000565810 TMEM88Q6PEY1 159 aa5.52□□□□□ -1.53
CDH1-208ENST00000565810 RASL11AQ6T310 242 aa5.52□□□□□ -1.53
CDH1-208ENST00000565810 Q6ZTC4 211 aa5.52□□□□□ -1.53
CDH1-208ENST00000565810 POM121L12Q8N7R1 296 aa5.52□□□□□ -1.53
CDH1-208ENST00000565810 ZNF479Q96JC4 524 aa5.52□□□□□ -1.53
CDH1-208ENST00000565810 SAMD10Q9BYL1 202 aa5.52□□□□□ -1.53
CDH1-208ENST00000565810 TMEM191AQ9H0A3 160 aa5.52□□□□□ -1.53
CDH1-208ENST00000565810 DPH3P1Q9H4G8 78 aa5.52□□□□□ -1.53
CDH1-208ENST00000565810 JPT2Q9H910 190 aa5.52□□□□□ -1.53
CDH1-208ENST00000565810 FBN3Q75N90 2809 aa5.51□□□□□ -1.53
CDH1-208ENST00000565810 CRYGDP07320 174 aa5.51□□□□□ -1.53
CDH1-208ENST00000565810 ELOBQ15370 118 aa5.51□□□□□ -1.53
CDH1-208ENST00000565810 ZNF56Q15929 161 aa5.51□□□□□ -1.53
CDH1-208ENST00000565810 PRADC1Q9BSG0 188 aa5.51□□□□□ -1.53
CDH1-208ENST00000565810 PRO0255Q9UI72 69 aa5.51□□□□□ -1.53
CDH1-208ENST00000565810 HHLA3Q9XRX5 114 aa5.51□□□□□ -1.53
CDH1-208ENST00000565810 TRBV24-1A0A075B6N3 115 aa5.5□□□□□ -1.53
CDH1-208ENST00000565810 A0A1B0GXF2 115 aa5.5□□□□□ -1.53
CDH1-208ENST00000565810 H7C1H1 209 aa5.5□□□□□ -1.53
CDH1-208ENST00000565810 FHL2Q14192 279 aa5.5□□□□□ -1.53
CDH1-208ENST00000565810 CBLN2Q8IUK8 224 aa5.5□□□□□ -1.53
CDH1-208ENST00000565810 PHLDA1Q8WV24 401 aaPredicted RBP5.5□□□□□ -1.53
CDH1-208ENST00000565810 FRZBQ92765 325 aa5.5□□□□□ -1.53
CDH1-208ENST00000565810 FAM210BQ96KR6 192 aa5.5□□□□□ -1.53
CDH1-208ENST00000565810 WWC2-AS2Q96NR7 200 aa5.5□□□□□ -1.53
CDH1-208ENST00000565810 TRAV26-1A0A087WT03 109 aa5.49□□□□□ -1.53
CDH1-208ENST00000565810 TGIF2-C20orf24A0A0A6YYL0 155 aa5.49□□□□□ -1.53
CDH1-208ENST00000565810 TRBV6-4A0A1B0GX49 114 aa5.49□□□□□ -1.53
CDH1-208ENST00000565810 PAX4O43316 350 aa5.49□□□□□ -1.53
CDH1-208ENST00000565810 SCO1O75880 301 aa5.49□□□□□ -1.53
CDH1-208ENST00000565810 HLA-DQA1P01909 254 aa5.49□□□□□ -1.53
CDH1-208ENST00000565810 MT-ND6P03923 174 aa5.49□□□□□ -1.53
CDH1-208ENST00000565810 GATA1P15976 413 aaPredicted RBP5.49□□□□□ -1.53
CDH1-208ENST00000565810 RAB4AP20338 218 aa5.49□□□□□ -1.53
CDH1-208ENST00000565810 HOXA5P20719 270 aa5.49□□□□□ -1.53
CDH1-208ENST00000565810 CRYBA4P53673 196 aa5.49□□□□□ -1.53
CDH1-208ENST00000565810 RHOHQ15669 191 aa5.49□□□□□ -1.53
CDH1-208ENST00000565810 FAM104BQ5XKR9 115 aa5.49□□□□□ -1.53
CDH1-208ENST00000565810 UFSP1Q6NVU6 142 aa5.49□□□□□ -1.53
CDH1-208ENST00000565810 AMN1Q8IY45 258 aa5.49□□□□□ -1.53
CDH1-208ENST00000565810 GATD1Q8NB37 220 aa5.49□□□□□ -1.53
CDH1-208ENST00000565810 GNB1LQ9BYB4 327 aa5.49□□□□□ -1.53
CDH1-208ENST00000565810 KLK5Q9Y337 293 aaPredicted RBP5.49□□□□□ -1.53
CDH1-208ENST00000565810 KIF25-AS1Q9Y6Z4 181 aa5.49□□□□□ -1.53
CDH1-208ENST00000565810 DNAH7Q8WXX0 4024 aa5.48□□□□□ -1.53
CDH1-208ENST00000565810 A0A0J9YY99 117 aa5.48□□□□□ -1.53
CDH1-208ENST00000565810 TRBV10-1A0A0K0K1A3 114 aa5.48□□□□□ -1.53
CDH1-208ENST00000565810 NUPR2A6NF83 97 aa5.48□□□□□ -1.53
CDH1-208ENST00000565810 K7EQD1 137 aa5.48□□□□□ -1.53
CDH1-208ENST00000565810 PPP1R17O96001 155 aa5.48□□□□□ -1.53
CDH1-208ENST00000565810 APCSP02743 223 aa5.48□□□□□ -1.53
CDH1-208ENST00000565810 CKS2P33552 79 aa5.48□□□□□ -1.53
CDH1-208ENST00000565810 LINC00315P59091 139 aa5.48□□□□□ -1.53
CDH1-208ENST00000565810 SUMO4Q6EEV6 95 aa5.48□□□□□ -1.53
CDH1-208ENST00000565810 TMEM136Q6ZRR5 245 aa5.48□□□□□ -1.53
CDH1-208ENST00000565810 SLC25A29Q8N8R3 303 aa5.48□□□□□ -1.53
CDH1-208ENST00000565810 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.48□□□□□ -1.53
CDH1-208ENST00000565810 MRAP2Q96G30 205 aa5.48□□□□□ -1.53
CDH1-208ENST00000565810 TRAPPC1Q9Y5R8 145 aa5.48□□□□□ -1.53
CDH1-208ENST00000565810 DYNC2H1Q8NCM8 4307 aaKnown RBP5.47□□□□□ -1.53
CDH1-208ENST00000565810 IGLL5B9A064 214 aa5.47□□□□□ -1.53
CDH1-208ENST00000565810 H3BNG1 76 aa5.47□□□□□ -1.53
CDH1-208ENST00000565810 PPBPP02775 128 aa5.47□□□□□ -1.53
CDH1-208ENST00000565810 GYPEP15421 78 aa5.47□□□□□ -1.53
CDH1-208ENST00000565810 RPL36AP83881 106 aaKnown RBP5.47□□□□□ -1.53
CDH1-208ENST00000565810 FABP9Q0Z7S8 132 aa5.47□□□□□ -1.53
CDH1-208ENST00000565810 MRPL51Q4U2R6 128 aaKnown RBP5.47□□□□□ -1.53
CDH1-208ENST00000565810 CEMP1Q6PRD7 247 aaPredicted RBP5.47□□□□□ -1.53
CDH1-208ENST00000565810 Q6ZSN1 163 aa5.47□□□□□ -1.53
CDH1-208ENST00000565810 C15orf53Q8NAA6 179 aa5.47□□□□□ -1.53
CDH1-208ENST00000565810 MUC7Q8TAX7 377 aa5.47□□□□□ -1.53
CDH1-208ENST00000565810 RPL36ALQ969Q0 106 aaKnown RBP5.47□□□□□ -1.53
CDH1-208ENST00000565810 RNF185Q96GF1 192 aa5.47□□□□□ -1.53
CDH1-208ENST00000565810 DNAJC30Q96LL9 226 aa5.47□□□□□ -1.53
CDH1-208ENST00000565810 YPEL4Q96NS1 127 aa5.47□□□□□ -1.53
CDH1-208ENST00000565810 TNFRSF18Q9Y5U5 241 aa5.47□□□□□ -1.53
CDH1-208ENST00000565810 PLECQ15149 4684 aaKnown RBP5.47□□□□□ -1.53
CDH1-208ENST00000565810 TRAV26-2A0A0B4J265 109 aa5.46□□□□□ -1.54
CDH1-208ENST00000565810 GAGE12JA6NER3 117 aa5.46□□□□□ -1.54
CDH1-208ENST00000565810 M0QY20 66 aa5.46□□□□□ -1.54
CDH1-208ENST00000565810 NUDT3O95989 172 aa5.46□□□□□ -1.54
CDH1-208ENST00000565810 SRIP30626 198 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms