RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 TNFRSF18Q9Y5U5 241 aa12.9□□□□□ -0.34
SPSB3-207ENST00000565550 C19orf71A6NCJ1 209 aa12.89□□□□□ -0.35
SPSB3-207ENST00000565550 OCC1Q8TAD7 63 aa12.89□□□□□ -0.35
SPSB3-207ENST00000565550 PTH2Q96A98 100 aa12.89□□□□□ -0.35
SPSB3-207ENST00000565550 M0R381 172 aa12.88□□□□□ -0.35
SPSB3-207ENST00000565550 GATA1P15976 413 aaPredicted RBP12.88□□□□□ -0.35
SPSB3-207ENST00000565550 SRSF3P84103 164 aaKnown RBP12.88□□□□□ -0.35
SPSB3-207ENST00000565550 MRPL23Q16540 153 aaKnown RBP12.88□□□□□ -0.35
SPSB3-207ENST00000565550 Q6ZSN1 163 aa12.88□□□□□ -0.35
SPSB3-207ENST00000565550 OR10AG1Q8NH19 301 aa12.88□□□□□ -0.35
SPSB3-207ENST00000565550 PHLDA3Q9Y5J5 127 aa12.88□□□□□ -0.35
SPSB3-207ENST00000565550 TMEM250H0YL14 139 aa12.87□□□□□ -0.35
SPSB3-207ENST00000565550 K7EQD1 137 aa12.87□□□□□ -0.35
SPSB3-207ENST00000565550 SRP19P09132 144 aaKnown RBP12.87□□□□□ -0.35
SPSB3-207ENST00000565550 GYPEP15421 78 aa12.87□□□□□ -0.35
SPSB3-207ENST00000565550 FUSP35637 526 aaKnown RBP eCLIP12.87□□□□□ -0.35
SPSB3-207ENST00000565550 SSTP61278 116 aa12.87□□□□□ -0.35
SPSB3-207ENST00000565550 PGPEP1Q9NXJ5 209 aa12.87□□□□□ -0.35
SPSB3-207ENST00000565550 C9JQL5 133 aa12.86□□□□□ -0.35
SPSB3-207ENST00000565550 NEGR1Q7Z3B1 354 aa12.86□□□□□ -0.35
SPSB3-207ENST00000565550 SLC25A29Q8N8R3 303 aa12.86□□□□□ -0.35
SPSB3-207ENST00000565550 OR2D3Q8NGH3 330 aa12.86□□□□□ -0.35
SPSB3-207ENST00000565550 RNASE7Q9H1E1 156 aaKnown RBP12.86□□□□□ -0.35
SPSB3-207ENST00000565550 A0A087WWL8 130 aa12.85□□□□□ -0.35
SPSB3-207ENST00000565550 UFSP1Q6NVU6 142 aa12.85□□□□□ -0.35
SPSB3-207ENST00000565550 NUDT10Q8NFP7 164 aa12.85□□□□□ -0.35
SPSB3-207ENST00000565550 DAZAP1Q96EP5 407 aaKnown RBP12.85□□□□□ -0.35
SPSB3-207ENST00000565550 SMIM12Q96EX1 92 aa12.85□□□□□ -0.35
SPSB3-207ENST00000565550 NUDT11Q96G61 164 aa12.85□□□□□ -0.35
SPSB3-207ENST00000565550 Q9UF83 564 aa12.85□□□□□ -0.35
SPSB3-207ENST00000565550 LINC00862A6NCI5 91 aa12.84□□□□□ -0.35
SPSB3-207ENST00000565550 EREGO14944 169 aa12.84□□□□□ -0.35
SPSB3-207ENST00000565550 SNAI2O43623 268 aa12.84□□□□□ -0.35
SPSB3-207ENST00000565550 CXCL1P09341 107 aa12.84□□□□□ -0.35
SPSB3-207ENST00000565550 ERVFC1-1P60608 527 aa12.84□□□□□ -0.35
SPSB3-207ENST00000565550 FAM74A4Q5TZK3 123 aa12.84□□□□□ -0.35
SPSB3-207ENST00000565550 SYT8Q8NBV8 401 aa12.84□□□□□ -0.35
SPSB3-207ENST00000565550 TRAV9-2A0A087WT02 112 aa12.83□□□□□ -0.36
SPSB3-207ENST00000565550 A8MWV9 139 aa12.83□□□□□ -0.36
SPSB3-207ENST00000565550 P01737 135 aa12.83□□□□□ -0.36
SPSB3-207ENST00000565550 SRIP30626 198 aa12.83□□□□□ -0.36
SPSB3-207ENST00000565550 NFE4Q86UQ8 179 aa12.83□□□□□ -0.36
SPSB3-207ENST00000565550 ZFP82Q8N141 532 aa12.83□□□□□ -0.36
SPSB3-207ENST00000565550 SFRP2Q96HF1 295 aa12.83□□□□□ -0.36
SPSB3-207ENST00000565550 SSBP4Q9BWG4 385 aaPredicted RBP12.83□□□□□ -0.36
SPSB3-207ENST00000565550 LY96Q9Y6Y9 160 aa12.83□□□□□ -0.36
SPSB3-207ENST00000565550 CRYGDP07320 174 aa12.82□□□□□ -0.36
SPSB3-207ENST00000565550 IGLC6P0CF74 106 aa12.82□□□□□ -0.36
SPSB3-207ENST00000565550 PIK3CD-AS1Q5SR53 167 aa12.82□□□□□ -0.36
SPSB3-207ENST00000565550 C14orf178Q8N769 122 aaPredicted RBP12.82□□□□□ -0.36
SPSB3-207ENST00000565550 SMIM7Q9BQ49 75 aa12.82□□□□□ -0.36
SPSB3-207ENST00000565550 TPPP3Q9BW30 176 aa12.82□□□□□ -0.36
SPSB3-207ENST00000565550 WFDC10BQ8IUB3 73 aa12.81□□□□□ -0.36
SPSB3-207ENST00000565550 A0A087WTM6 91 aa12.8□□□□□ -0.36
SPSB3-207ENST00000565550 ZNF727A8MUV8 499 aa12.8□□□□□ -0.36
SPSB3-207ENST00000565550 NDUFS6O75380 124 aaKnown RBP12.8□□□□□ -0.36
SPSB3-207ENST00000565550 OR5AL1P0C617 328 aa12.8□□□□□ -0.36
SPSB3-207ENST00000565550 DNAH10OSP0CZ25 163 aa12.8□□□□□ -0.36
SPSB3-207ENST00000565550 PEA15Q15121 130 aa12.8□□□□□ -0.36
SPSB3-207ENST00000565550 ZFP2Q6ZN57 461 aa12.8□□□□□ -0.36
SPSB3-207ENST00000565550 FER1L6-AS1Q8NA97 138 aa12.8□□□□□ -0.36
SPSB3-207ENST00000565550 SMDT1Q9H4I9 107 aa12.8□□□□□ -0.36
SPSB3-207ENST00000565550 MSRB1Q9NZV6 116 aa12.8□□□□□ -0.36
SPSB3-207ENST00000565550 TRBV6-4A0A1B0GX49 114 aa12.79□□□□□ -0.36
SPSB3-207ENST00000565550 SPANXN1Q5VSR9 72 aa12.79□□□□□ -0.36
SPSB3-207ENST00000565550 CDPF1Q6NVV7 123 aa12.79□□□□□ -0.36
SPSB3-207ENST00000565550 COMMD7Q86VX2 200 aa12.79□□□□□ -0.36
SPSB3-207ENST00000565550 RPP21Q9H633 154 aaKnown RBP12.79□□□□□ -0.36
SPSB3-207ENST00000565550 EPM2AB3EWF7 344 aa12.78□□□□□ -0.36
SPSB3-207ENST00000565550 EVI2AP22794 236 aa12.78□□□□□ -0.36
SPSB3-207ENST00000565550 XGP55808 180 aa12.78□□□□□ -0.36
SPSB3-207ENST00000565550 RPS20P60866 119 aaKnown RBP12.78□□□□□ -0.36
SPSB3-207ENST00000565550 RHOHQ15669 191 aa12.78□□□□□ -0.36
SPSB3-207ENST00000565550 LINC01551Q86U37 167 aa12.78□□□□□ -0.36
SPSB3-207ENST00000565550 PRADC1Q9BSG0 188 aa12.78□□□□□ -0.36
SPSB3-207ENST00000565550 BIN3Q9NQY0 253 aa12.78□□□□□ -0.36
SPSB3-207ENST00000565550 GAGE12JA6NER3 117 aa12.77□□□□□ -0.37
SPSB3-207ENST00000565550 K7EP13 123 aa12.77□□□□□ -0.37
SPSB3-207ENST00000565550 CIDEAO60543 219 aa12.77□□□□□ -0.37
SPSB3-207ENST00000565550 GAGE1Q13065 139 aa12.77□□□□□ -0.37
SPSB3-207ENST00000565550 GAGE4Q13068 117 aa12.77□□□□□ -0.37
SPSB3-207ENST00000565550 GAGE5Q13069 117 aa12.77□□□□□ -0.37
SPSB3-207ENST00000565550 GAGE13Q4V321 117 aa12.77□□□□□ -0.37
SPSB3-207ENST00000565550 UQCC3Q6UW78 93 aa12.77□□□□□ -0.37
SPSB3-207ENST00000565550 LYZL1Q6UWQ5 148 aa12.77□□□□□ -0.37
SPSB3-207ENST00000565550 KRTAP10-1P60331 282 aa12.76□□□□□ -0.37
SPSB3-207ENST00000565550 NDUFA5Q16718 116 aa12.76□□□□□ -0.37
SPSB3-207ENST00000565550 RHODO00212 210 aa12.75□□□□□ -0.37
SPSB3-207ENST00000565550 GATCO43716 136 aaKnown RBP12.75□□□□□ -0.37
SPSB3-207ENST00000565550 GTSF1Q8WW33 167 aa12.75□□□□□ -0.37
SPSB3-207ENST00000565550 FAT1Q14517 4588 aa12.74□□□□□ -0.37
SPSB3-207ENST00000565550 LINC00694P0DN24 101 aa12.74□□□□□ -0.37
SPSB3-207ENST00000565550 ZNF56Q15929 161 aa12.74□□□□□ -0.37
SPSB3-207ENST00000565550 FAM231DQ6ZW35 169 aa12.74□□□□□ -0.37
SPSB3-207ENST00000565550 KIF25-AS1Q9Y6Z4 181 aa12.74□□□□□ -0.37
SPSB3-207ENST00000565550 XKRY2A2RUG3 117 aa12.73□□□□□ -0.37
SPSB3-207ENST00000565550 CTRLP40313 264 aa12.73□□□□□ -0.37
SPSB3-207ENST00000565550 RPL23P62829 140 aaKnown RBP12.73□□□□□ -0.37
SPSB3-207ENST00000565550 SH2D6Q7Z4S9 175 aa12.72□□□□□ -0.37
SPSB3-207ENST00000565550 MGPP08493 103 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms