RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 FAM162BQ5T6X4 162 aa15.72■□□□□ 0.11
RAB40C-209ENST00000565511 FAM74A4Q5TZK3 123 aa15.72■□□□□ 0.11
RAB40C-209ENST00000565511 FMC1Q96HJ9 113 aa15.72■□□□□ 0.11
RAB40C-209ENST00000565511 TMEM70Q9BUB7 260 aa15.72■□□□□ 0.11
RAB40C-209ENST00000565511 NKX6-2Q9C056 277 aaPredicted RBP15.72■□□□□ 0.11
RAB40C-209ENST00000565511 ZFP30Q9Y2G7 519 aa15.72■□□□□ 0.11
RAB40C-209ENST00000565511 LTAP01374 205 aa15.71■□□□□ 0.11
RAB40C-209ENST00000565511 LINC01559Q495D7 138 aa15.71■□□□□ 0.11
RAB40C-209ENST00000565511 OR11H4Q8NGC9 324 aa15.71■□□□□ 0.11
RAB40C-209ENST00000565511 BOLA1Q9Y3E2 137 aa15.71■□□□□ 0.11
RAB40C-209ENST00000565511 TRBV6-1A0A0K0K1D8 114 aa15.7■□□□□ 0.1
RAB40C-209ENST00000565511 CST9LP1Q5W188 147 aa15.7■□□□□ 0.1
RAB40C-209ENST00000565511 SFRP2Q96HF1 295 aa15.7■□□□□ 0.1
RAB40C-209ENST00000565511 M0R381 172 aa15.69■□□□□ 0.1
RAB40C-209ENST00000565511 UBE2G1P62253 170 aa15.69■□□□□ 0.1
RAB40C-209ENST00000565511 SYT8Q8NBV8 401 aa15.69■□□□□ 0.1
RAB40C-209ENST00000565511 RHODO00212 210 aa15.68■□□□□ 0.1
RAB40C-209ENST00000565511 PAGE4O60829 102 aa15.68■□□□□ 0.1
RAB40C-209ENST00000565511 A0A1B0GV50 99 aa15.67■□□□□ 0.1
RAB40C-209ENST00000565511 AKR1C3P42330 323 aa15.67■□□□□ 0.1
RAB40C-209ENST00000565511 RPL19P84098 196 aaKnown RBP15.67■□□□□ 0.1
RAB40C-209ENST00000565511 RGS21Q2M5E4 152 aa15.67■□□□□ 0.1
RAB40C-209ENST00000565511 NIT1Q86X76 327 aa15.67■□□□□ 0.1
RAB40C-209ENST00000565511 TM2D2Q9BX73 214 aa15.67■□□□□ 0.1
RAB40C-209ENST00000565511 PHLDA3Q9Y5J5 127 aa15.67■□□□□ 0.1
RAB40C-209ENST00000565511 TPT1P13693 172 aaKnown RBP15.66■□□□□ 0.1
RAB40C-209ENST00000565511 KCNRGQ8N5I3 272 aa15.66■□□□□ 0.1
RAB40C-209ENST00000565511 A0A087WWC5 75 aa15.65■□□□□ 0.1
RAB40C-209ENST00000565511 SCO2A0A1W2PP80 73 aa15.65■□□□□ 0.1
RAB40C-209ENST00000565511 BAALCQ8WXS3 180 aa15.65■□□□□ 0.1
RAB40C-209ENST00000565511 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.64■□□□□ 0.09
RAB40C-209ENST00000565511 TRAV8-3A0A0A6YYJ7 113 aa15.64■□□□□ 0.09
RAB40C-209ENST00000565511 LINC01620Q4KN68 170 aa15.64■□□□□ 0.09
RAB40C-209ENST00000565511 Q6ZSA8 131 aa15.64■□□□□ 0.09
RAB40C-209ENST00000565511 FAM213BQ8TBF2 198 aa15.64■□□□□ 0.09
RAB40C-209ENST00000565511 TCEAL7Q9BRU2 100 aa15.64■□□□□ 0.09
RAB40C-209ENST00000565511 ZFP82Q8N141 532 aa15.63■□□□□ 0.09
RAB40C-209ENST00000565511 OR10AG1Q8NH19 301 aa15.63■□□□□ 0.09
RAB40C-209ENST00000565511 STOML3Q8TAV4 291 aa15.63■□□□□ 0.09
RAB40C-209ENST00000565511 MBD3L1Q8WWY6 194 aa15.63■□□□□ 0.09
RAB40C-209ENST00000565511 UBE2D3P61077 147 aa15.62■□□□□ 0.09
RAB40C-209ENST00000565511 UBE2D2P62837 147 aa15.62■□□□□ 0.09
RAB40C-209ENST00000565511 SFT2D1Q8WV19 159 aa15.62■□□□□ 0.09
RAB40C-209ENST00000565511 KLK12Q9UKR0 248 aa15.62■□□□□ 0.09
RAB40C-209ENST00000565511 ZNF345Q14585 488 aa15.61■□□□□ 0.09
RAB40C-209ENST00000565511 MLST8Q9BVC4 326 aa15.61■□□□□ 0.09
RAB40C-209ENST00000565511 MUC21A0A0G2JKD1 596 aa15.6■□□□□ 0.09
RAB40C-209ENST00000565511 MUC21A0A140T8X8 626 aa15.6■□□□□ 0.09
RAB40C-209ENST00000565511 FAM229AH3BQW9 127 aa15.6■□□□□ 0.09
RAB40C-209ENST00000565511 C1QBP02746 253 aa15.6■□□□□ 0.09
RAB40C-209ENST00000565511 SEC11BP0C7V7 166 aa15.6■□□□□ 0.09
RAB40C-209ENST00000565511 TOR2AQ5JU69 321 aa15.6■□□□□ 0.09
RAB40C-209ENST00000565511 IGKV2D-24A0A075B6R9 120 aa15.58■□□□□ 0.08
RAB40C-209ENST00000565511 TRBV10-1A0A0K0K1A3 114 aa15.58■□□□□ 0.08
RAB40C-209ENST00000565511 NEXN-AS1Q8NBZ9 246 aa15.58■□□□□ 0.08
RAB40C-209ENST00000565511 RPL36AP83881 106 aaKnown RBP15.57■□□□□ 0.08
RAB40C-209ENST00000565511 OR10G8Q8NGN5 311 aa15.57■□□□□ 0.08
RAB40C-209ENST00000565511 RPL36ALQ969Q0 106 aaKnown RBP15.57■□□□□ 0.08
RAB40C-209ENST00000565511 UBE2WQ96B02 151 aa15.57■□□□□ 0.08
RAB40C-209ENST00000565511 ZNF471Q9BX82 626 aaPredicted RBP15.57■□□□□ 0.08
RAB40C-209ENST00000565511 URGCP-MRPS24S4R325 110 aa15.57■□□□□ 0.08
RAB40C-209ENST00000565511 TRBV7-3A0A075B6L6 115 aa15.56■□□□□ 0.08
RAB40C-209ENST00000565511 BCL2L11O43521 198 aa15.56■□□□□ 0.08
RAB40C-209ENST00000565511 SNAI2O43623 268 aa15.56■□□□□ 0.08
RAB40C-209ENST00000565511 PRR27Q6MZM9 219 aa15.56■□□□□ 0.08
RAB40C-209ENST00000565511 BAGE2Q86Y30 109 aa15.56■□□□□ 0.08
RAB40C-209ENST00000565511 CXCL1P09341 107 aa15.55■□□□□ 0.08
RAB40C-209ENST00000565511 ZNF56Q15929 161 aa15.55■□□□□ 0.08
RAB40C-209ENST00000565511 HMSDA8MTL9 139 aa15.54■□□□□ 0.08
RAB40C-209ENST00000565511 UMAD1C9J7I0 102 aa15.54■□□□□ 0.08
RAB40C-209ENST00000565511 CCL20P78556 96 aa15.54■□□□□ 0.08
RAB40C-209ENST00000565511 ATRAIDQ6UW56 229 aa15.54■□□□□ 0.08
RAB40C-209ENST00000565511 DERL1Q9BUN8 251 aa15.54■□□□□ 0.08
RAB40C-209ENST00000565511 SSBP4Q9BWG4 385 aaPredicted RBP15.54■□□□□ 0.08
RAB40C-209ENST00000565511 A0A087WX48 190 aa15.53■□□□□ 0.08
RAB40C-209ENST00000565511 S100A9P06702 114 aaKnown RBP15.53■□□□□ 0.08
RAB40C-209ENST00000565511 RAB4BP61018 213 aa15.53■□□□□ 0.08
RAB40C-209ENST00000565511 LINC00528Q8N1L1 170 aa15.53■□□□□ 0.08
RAB40C-209ENST00000565511 RMI2Q96E14 147 aa15.53■□□□□ 0.08
RAB40C-209ENST00000565511 TRBV6-8A0A0A6YYG3 113 aa15.52■□□□□ 0.08
RAB40C-209ENST00000565511 PFDN1O60925 122 aa15.52■□□□□ 0.08
RAB40C-209ENST00000565511 SSTP61278 116 aa15.52■□□□□ 0.08
RAB40C-209ENST00000565511 MPV17L2Q567V2 206 aa15.52■□□□□ 0.08
RAB40C-209ENST00000565511 ENHOQ6UWT2 76 aa15.52■□□□□ 0.08
RAB40C-209ENST00000565511 CHCHD7Q9BUK0 85 aa15.52■□□□□ 0.08
RAB40C-209ENST00000565511 COX11Q9Y6N1 276 aa15.52■□□□□ 0.08
RAB40C-209ENST00000565511 A0A0D9SG52 128 aa15.51■□□□□ 0.07
RAB40C-209ENST00000565511 KANTRA0A1W2PQU2 76 aa15.51■□□□□ 0.07
RAB40C-209ENST00000565511 H2AFB1P0C5Y9 115 aa15.51■□□□□ 0.07
RAB40C-209ENST00000565511 OR5AL1P0C617 328 aa15.51■□□□□ 0.07
RAB40C-209ENST00000565511 SCXQ7RTU7 201 aa15.51■□□□□ 0.07
RAB40C-209ENST00000565511 KIF25-AS1Q9Y6Z4 181 aa15.51■□□□□ 0.07
RAB40C-209ENST00000565511 RPL35P42766 123 aaKnown RBP15.5■□□□□ 0.07
RAB40C-209ENST00000565511 NTM-AS1Q6ZSK4 140 aa15.5■□□□□ 0.07
RAB40C-209ENST00000565511 TMUB2Q71RG4 321 aa15.5■□□□□ 0.07
RAB40C-209ENST00000565511 RBFOX3A6NFN3 312 aa15.49■□□□□ 0.07
RAB40C-209ENST00000565511 C15orf54Q8N8G6 183 aa15.49■□□□□ 0.07
RAB40C-209ENST00000565511 Q8N976 141 aa15.49■□□□□ 0.07
RAB40C-209ENST00000565511 TMEM262E9PQX1 116 aa15.48■□□□□ 0.07
RAB40C-209ENST00000565511 IGLV2-8P01709 118 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms