RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 TMSB15BA0A087X1C1 80 aa10.43□□□□□ -0.74
CDH3-204ENST00000565453 UMAD1C9J7I0 102 aa10.43□□□□□ -0.74
CDH3-204ENST00000565453 BCL2L11O43521 198 aa10.43□□□□□ -0.74
CDH3-204ENST00000565453 TPT1P13693 172 aaKnown RBP10.43□□□□□ -0.74
CDH3-204ENST00000565453 Q8N814 137 aa10.43□□□□□ -0.74
CDH3-204ENST00000565453 NTN5Q8WTR8 489 aaPredicted RBP10.43□□□□□ -0.74
CDH3-204ENST00000565453 SFT2D1Q8WV19 159 aa10.43□□□□□ -0.74
CDH3-204ENST00000565453 PHLDA3Q9Y5J5 127 aa10.43□□□□□ -0.74
CDH3-204ENST00000565453 A0A087WWL8 130 aa10.42□□□□□ -0.74
CDH3-204ENST00000565453 A0A0D9SG52 128 aa10.42□□□□□ -0.74
CDH3-204ENST00000565453 SCO2A0A1W2PP80 73 aa10.42□□□□□ -0.74
CDH3-204ENST00000565453 EPM2AB3EWF7 344 aa10.42□□□□□ -0.74
CDH3-204ENST00000565453 FAM74A4Q5TZK3 123 aa10.42□□□□□ -0.74
CDH3-204ENST00000565453 MLST8Q9BVC4 326 aa10.42□□□□□ -0.74
CDH3-204ENST00000565453 ZNF471Q9BX82 626 aaPredicted RBP10.42□□□□□ -0.74
CDH3-204ENST00000565453 A0A087WWC5 75 aa10.41□□□□□ -0.74
CDH3-204ENST00000565453 IGLV5-52A0A0A0MRZ9 124 aa10.41□□□□□ -0.74
CDH3-204ENST00000565453 A0A1B0GV50 99 aa10.41□□□□□ -0.74
CDH3-204ENST00000565453 M0R381 172 aa10.41□□□□□ -0.74
CDH3-204ENST00000565453 S100A9P06702 114 aaKnown RBP10.41□□□□□ -0.74
CDH3-204ENST00000565453 DAZ4Q86SG3 579 aaKnown RBP10.41□□□□□ -0.74
CDH3-204ENST00000565453 ZFP82Q8N141 532 aa10.41□□□□□ -0.74
CDH3-204ENST00000565453 DAZ3Q9NR90 486 aaKnown RBP10.41□□□□□ -0.74
CDH3-204ENST00000565453 KANTRA0A1W2PQU2 76 aa10.4□□□□□ -0.74
CDH3-204ENST00000565453 CXCL1P09341 107 aa10.4□□□□□ -0.74
CDH3-204ENST00000565453 RPL19P84098 196 aaKnown RBP10.4□□□□□ -0.74
CDH3-204ENST00000565453 WFDC2Q14508 124 aa10.4□□□□□ -0.74
CDH3-204ENST00000565453 TM2D2Q9BX73 214 aa10.4□□□□□ -0.74
CDH3-204ENST00000565453 TRAV8-3A0A0A6YYJ7 113 aa10.38□□□□□ -0.75
CDH3-204ENST00000565453 TRBV10-1A0A0K0K1A3 114 aa10.38□□□□□ -0.75
CDH3-204ENST00000565453 PFDN1O60925 122 aa10.38□□□□□ -0.75
CDH3-204ENST00000565453 H2AFB1P0C5Y9 115 aa10.38□□□□□ -0.75
CDH3-204ENST00000565453 TMUB2Q71RG4 321 aa10.38□□□□□ -0.75
CDH3-204ENST00000565453 NIT1Q86X76 327 aa10.38□□□□□ -0.75
CDH3-204ENST00000565453 BAGE2Q86Y30 109 aa10.38□□□□□ -0.75
CDH3-204ENST00000565453 TMEM70Q9BUB7 260 aa10.38□□□□□ -0.75
CDH3-204ENST00000565453 SSBP4Q9BWG4 385 aaPredicted RBP10.38□□□□□ -0.75
CDH3-204ENST00000565453 FAT1Q14517 4588 aa10.37□□□□□ -0.75
CDH3-204ENST00000565453 SNAI2O43623 268 aa10.37□□□□□ -0.75
CDH3-204ENST00000565453 UBE2D3P61077 147 aa10.37□□□□□ -0.75
CDH3-204ENST00000565453 UBE2D2P62837 147 aa10.37□□□□□ -0.75
CDH3-204ENST00000565453 EIF5AP63241 154 aaKnown RBP10.37□□□□□ -0.75
CDH3-204ENST00000565453 Q5VSD8 79 aa10.37□□□□□ -0.75
CDH3-204ENST00000565453 OR10G8Q8NGN5 311 aa10.37□□□□□ -0.75
CDH3-204ENST00000565453 OR10AG1Q8NH19 301 aa10.37□□□□□ -0.75
CDH3-204ENST00000565453 CCL20P78556 96 aa10.36□□□□□ -0.75
CDH3-204ENST00000565453 HAMPP81172 84 aa10.36□□□□□ -0.75
CDH3-204ENST00000565453 RPL36AP83881 106 aaKnown RBP10.36□□□□□ -0.75
CDH3-204ENST00000565453 TOR2AQ5JU69 321 aa10.36□□□□□ -0.75
CDH3-204ENST00000565453 RPL36ALQ969Q0 106 aaKnown RBP10.36□□□□□ -0.75
CDH3-204ENST00000565453 DNAH8Q96JB1 4490 aa10.35□□□□□ -0.75
CDH3-204ENST00000565453 VPS13BQ7Z7G8 4022 aa10.35□□□□□ -0.75
CDH3-204ENST00000565453 TRBV7-3A0A075B6L6 115 aa10.35□□□□□ -0.75
CDH3-204ENST00000565453 SMR3BP02814 79 aaPredicted RBP10.35□□□□□ -0.75
CDH3-204ENST00000565453 RAB4BP61018 213 aa10.35□□□□□ -0.75
CDH3-204ENST00000565453 PRR27Q6MZM9 219 aa10.35□□□□□ -0.75
CDH3-204ENST00000565453 FRZBQ92765 325 aa10.35□□□□□ -0.75
CDH3-204ENST00000565453 C11orf52Q96A22 123 aa10.35□□□□□ -0.75
CDH3-204ENST00000565453 DNAJC30Q96LL9 226 aa10.35□□□□□ -0.75
CDH3-204ENST00000565453 FAM30AQ9NZY2 134 aa10.35□□□□□ -0.75
CDH3-204ENST00000565453 TRAV1-1A0A0B4J248 108 aa10.34□□□□□ -0.75
CDH3-204ENST00000565453 OR5AL1P0C617 328 aa10.34□□□□□ -0.75
CDH3-204ENST00000565453 INAFM2P0DMQ5 153 aa10.34□□□□□ -0.75
CDH3-204ENST00000565453 RPL35P42766 123 aaKnown RBP10.34□□□□□ -0.75
CDH3-204ENST00000565453 NEXN-AS1Q8NBZ9 246 aa10.34□□□□□ -0.75
CDH3-204ENST00000565453 CHCHD7Q9BUK0 85 aa10.34□□□□□ -0.75
CDH3-204ENST00000565453 DERL1Q9BUN8 251 aa10.34□□□□□ -0.75
CDH3-204ENST00000565453 MANBALQ9NQG1 85 aa10.34□□□□□ -0.75
CDH3-204ENST00000565453 LECT2O14960 151 aa10.33□□□□□ -0.76
CDH3-204ENST00000565453 C1QBP02746 253 aa10.33□□□□□ -0.76
CDH3-204ENST00000565453 KLK12Q9UKR0 248 aa10.33□□□□□ -0.76
CDH3-204ENST00000565453 URGCP-MRPS24S4R325 110 aa10.33□□□□□ -0.76
CDH3-204ENST00000565453 MUC21A0A0G2JKD1 596 aa10.32□□□□□ -0.76
CDH3-204ENST00000565453 MUC21A0A140T8X8 626 aa10.32□□□□□ -0.76
CDH3-204ENST00000565453 IGLV2-8P01709 118 aa10.32□□□□□ -0.76
CDH3-204ENST00000565453 ZNF56Q15929 161 aa10.32□□□□□ -0.76
CDH3-204ENST00000565453 BAALCQ8WXS3 180 aa10.32□□□□□ -0.76
CDH3-204ENST00000565453 GNG13Q9P2W3 67 aa10.32□□□□□ -0.76
CDH3-204ENST00000565453 COX11Q9Y6N1 276 aa10.32□□□□□ -0.76
CDH3-204ENST00000565453 KIF25-AS1Q9Y6Z4 181 aa10.32□□□□□ -0.76
CDH3-204ENST00000565453 RAB5CP51148 216 aa10.31□□□□□ -0.76
CDH3-204ENST00000565453 SPANXN1Q5VSR9 72 aa10.31□□□□□ -0.76
CDH3-204ENST00000565453 ATRAIDQ6UW56 229 aa10.31□□□□□ -0.76
CDH3-204ENST00000565453 Q6ZSA8 131 aa10.31□□□□□ -0.76
CDH3-204ENST00000565453 RMI2Q96E14 147 aa10.31□□□□□ -0.76
CDH3-204ENST00000565453 IGKV2D-24A0A075B6R9 120 aa10.3□□□□□ -0.76
CDH3-204ENST00000565453 A0A087WX48 190 aa10.3□□□□□ -0.76
CDH3-204ENST00000565453 TRBV6-8A0A0A6YYG3 113 aa10.3□□□□□ -0.76
CDH3-204ENST00000565453 SULT1A2P50226 295 aa10.3□□□□□ -0.76
CDH3-204ENST00000565453 CENPWQ5EE01 88 aa10.3□□□□□ -0.76
CDH3-204ENST00000565453 UBE2WQ96B02 151 aa10.3□□□□□ -0.76
CDH3-204ENST00000565453 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.29□□□□□ -0.76
CDH3-204ENST00000565453 C19orf71A6NCJ1 209 aa10.29□□□□□ -0.76
CDH3-204ENST00000565453 IGLC6P0CF74 106 aa10.29□□□□□ -0.76
CDH3-204ENST00000565453 ELOBQ15370 118 aa10.29□□□□□ -0.76
CDH3-204ENST00000565453 EIF5AL1Q6IS14 154 aaKnown RBP10.28□□□□□ -0.76
CDH3-204ENST00000565453 TCTE3Q8IZS6 198 aa10.28□□□□□ -0.76
CDH3-204ENST00000565453 VAX2Q9UIW0 290 aa10.28□□□□□ -0.76
CDH3-204ENST00000565453 RAB19A4D1S5 217 aa10.27□□□□□ -0.77
CDH3-204ENST00000565453 RBFOX3A6NFN3 312 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms