RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 MAP1LC3BQ9GZQ8 125 aa0.92□□□□□ -2.26
CHD9-215ENST00000565442 CCDC167Q9P0B6 97 aa0.92□□□□□ -2.26
CHD9-215ENST00000565442 DNAJC15Q9Y5T4 150 aa0.92□□□□□ -2.26
CHD9-215ENST00000565442 SPAG17Q6Q759 2223 aa0.91□□□□□ -2.26
CHD9-215ENST00000565442 NBEAQ8NFP9 2946 aa0.91□□□□□ -2.26
CHD9-215ENST00000565442 SPTY2D1-AS1A0A0U1RR47 76 aa0.91□□□□□ -2.26
CHD9-215ENST00000565442 C17orf112F2Z3M2 114 aa0.91□□□□□ -2.26
CHD9-215ENST00000565442 H0YGG7 62 aa0.91□□□□□ -2.26
CHD9-215ENST00000565442 FXYD1O00168 92 aa0.91□□□□□ -2.26
CHD9-215ENST00000565442 NUPR1O60356 82 aa0.91□□□□□ -2.26
CHD9-215ENST00000565442 ERC2-IT1O76042 136 aa0.91□□□□□ -2.26
CHD9-215ENST00000565442 TFF1P04155 84 aa0.91□□□□□ -2.26
CHD9-215ENST00000565442 CXCL1P09341 107 aa0.91□□□□□ -2.26
CHD9-215ENST00000565442 RPS27P42677 84 aaKnown RBP0.91□□□□□ -2.26
CHD9-215ENST00000565442 SARNPP82979 210 aaKnown RBP0.91□□□□□ -2.26
CHD9-215ENST00000565442 CDK6Q00534 326 aa0.91□□□□□ -2.26
CHD9-215ENST00000565442 PATE2Q6UY27 113 aa0.91□□□□□ -2.26
CHD9-215ENST00000565442 COMMD6Q7Z4G1 85 aa0.91□□□□□ -2.26
CHD9-215ENST00000565442 GKN2Q86XP6 184 aa0.91□□□□□ -2.26
CHD9-215ENST00000565442 Q8N6K4 173 aa0.91□□□□□ -2.26
CHD9-215ENST00000565442 OR4K15Q8NH41 348 aa0.91□□□□□ -2.26
CHD9-215ENST00000565442 THEM6Q8WUY1 208 aa0.91□□□□□ -2.26
CHD9-215ENST00000565442 LCN9Q8WX39 176 aa0.91□□□□□ -2.26
CHD9-215ENST00000565442 MALSU1Q96EH3 234 aa0.91□□□□□ -2.26
CHD9-215ENST00000565442 ZNF714Q96N38 554 aa0.91□□□□□ -2.26
CHD9-215ENST00000565442 OR2J1Q9GZK6 312 aa0.91□□□□□ -2.26
CHD9-215ENST00000565442 POPDC3Q9HBV1 291 aa0.91□□□□□ -2.26
CHD9-215ENST00000565442 JPT1Q9UK76 154 aa0.91□□□□□ -2.26
CHD9-215ENST00000565442 SSR3Q9UNL2 185 aa0.91□□□□□ -2.26
CHD9-215ENST00000565442 NOTCH1P46531 2555 aa0.91□□□□□ -2.26
CHD9-215ENST00000565442 HRNRQ86YZ3 2850 aaPredicted RBP0.9□□□□□ -2.26
CHD9-215ENST00000565442 TANC2Q9HCD6 1990 aa0.9□□□□□ -2.26
CHD9-215ENST00000565442 BDP1A6H8Y1 2624 aa0.9□□□□□ -2.26
CHD9-215ENST00000565442 RELNP78509 3460 aa0.9□□□□□ -2.26
CHD9-215ENST00000565442 CPSF4LA6NMK7 179 aaKnown RBP0.9□□□□□ -2.27
CHD9-215ENST00000565442 RIIAD1A6NNX1 92 aa0.9□□□□□ -2.27
CHD9-215ENST00000565442 F8W1H4 67 aa0.9□□□□□ -2.27
CHD9-215ENST00000565442 ARPC5O15511 151 aa0.9□□□□□ -2.27
CHD9-215ENST00000565442 SMIM24O75264 130 aa0.9□□□□□ -2.27
CHD9-215ENST00000565442 TNFSF15O95150 251 aa0.9□□□□□ -2.27
CHD9-215ENST00000565442 TNFP01375 233 aa0.9□□□□□ -2.27
CHD9-215ENST00000565442 IGLV1-51P01701 117 aa0.9□□□□□ -2.27
CHD9-215ENST00000565442 HMGN1P05114 100 aa0.9□□□□□ -2.27
CHD9-215ENST00000565442 COX4I1P13073 169 aa0.9□□□□□ -2.27
CHD9-215ENST00000565442 RPS3P23396 243 aaKnown RBP eCLIP0.9□□□□□ -2.27
CHD9-215ENST00000565442 TMBIM6P55061 237 aa0.9□□□□□ -2.27
CHD9-215ENST00000565442 DEFB109BQ30KR1 87 aa0.9□□□□□ -2.27
CHD9-215ENST00000565442 SCGB2B2Q4G0G5 96 aa0.9□□□□□ -2.27
CHD9-215ENST00000565442 PHF5AQ7RTV0 110 aaKnown RBP0.9□□□□□ -2.27
CHD9-215ENST00000565442 TEN1Q86WV5 123 aa0.9□□□□□ -2.27
CHD9-215ENST00000565442 DEFB107AQ8IZN7 70 aa0.9□□□□□ -2.27
CHD9-215ENST00000565442 MUCL1Q96DR8 90 aa0.9□□□□□ -2.27
CHD9-215ENST00000565442 GPX7Q96SL4 187 aaPredicted RBP0.9□□□□□ -2.27
CHD9-215ENST00000565442 EFCAB11Q9BUY7 163 aa0.9□□□□□ -2.27
CHD9-215ENST00000565442 PBDC1Q9BVG4 233 aa0.9□□□□□ -2.27
CHD9-215ENST00000565442 RTL8AQ9BWD3 113 aa0.9□□□□□ -2.27
CHD9-215ENST00000565442 SAR1AQ9NR31 198 aa0.9□□□□□ -2.27
CHD9-215ENST00000565442 OR52A1Q9UKL2 312 aa0.9□□□□□ -2.27
CHD9-215ENST00000565442 HSPB11Q9Y547 144 aa0.9□□□□□ -2.27
CHD9-215ENST00000565442 LAMA5O15230 3695 aa0.9□□□□□ -2.27
CHD9-215ENST00000565442 CFAP47Q6ZTR5 3102 aa0.9□□□□□ -2.27
CHD9-215ENST00000565442 NBPF19A0A087WUL8 3843 aa0.9□□□□□ -2.27
CHD9-215ENST00000565442 BSNQ9UPA5 3926 aa0.9□□□□□ -2.27
CHD9-215ENST00000565442 TENM4Q6N022 2769 aa0.9□□□□□ -2.27
CHD9-215ENST00000565442 PI4KAP42356 2102 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 LOC400499M0QZD8 3231 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 TRAV27A0A087WT01 109 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 PNMA8CA0A1B0GUJ8 204 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 A6NIN4 97 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 TSTD3H0UI37 97 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 H7BYZ3 331 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 HMGN4O00479 90 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 FAM107AO95990 144 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 TRGC2P03986 189 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 HMGN2P05204 90 aaKnown RBP0.89□□□□□ -2.27
CHD9-215ENST00000565442 GYPBP06028 91 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 OR10J4P0C629 311 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 MPC1LP0DKB6 136 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 RPL7P18124 248 aaKnown RBP0.89□□□□□ -2.27
CHD9-215ENST00000565442 CMPK1P30085 196 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 POLR2HP52434 150 aaKnown RBP0.89□□□□□ -2.27
CHD9-215ENST00000565442 POLR2JP52435 117 aaKnown RBP0.89□□□□□ -2.27
CHD9-215ENST00000565442 EFNA4P52798 201 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 FXYD6P3P58550 94 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 INSL4Q14641 139 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 CCDC153Q494R4 210 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 C6orf52Q5T4I8 152 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 SNX29P2Q8IUI4 249 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 FAM24BQ8N5W8 94 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 OR9Q1Q8NGQ5 310 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 CHCHD1Q96BP2 118 aaKnown RBP0.89□□□□□ -2.27
CHD9-215ENST00000565442 CCDC115Q96NT0 180 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 TMEM70Q9BUB7 260 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 OTORQ9NRC9 128 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 SPANXA1Q9NS26 97 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 MED11Q9P086 117 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 TNFSF18Q9UNG2 199 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 ASB4Q9Y574 426 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 NUBP2Q9Y5Y2 271 aa0.89□□□□□ -2.27
CHD9-215ENST00000565442 UNC13CQ8NB66 2214 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms