RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 AGPAT4-IT1Q9H0P7 198 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 OSTCQ9NRP0 149 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 TMEM106BQ9NUM4 274 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 LSM2Q9Y333 95 aaKnown RBP1.1□□□□□ -2.23
CHD9-209ENST00000564255 NOP16Q9Y3C1 178 aaKnown RBP1.1□□□□□ -2.23
CHD9-209ENST00000564255 MYH13Q9UKX3 1938 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 A0A1W2PRS3 328 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 TMEM262E9PQX1 116 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 J3QKU1 62 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 OR1I1O60431 355 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 HBDP02042 147 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 IGLC1P0CG04 106 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 PEBP1P30086 187 aaKnown RBP1.1□□□□□ -2.23
CHD9-209ENST00000564255 ETV6P41212 452 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 DCDP81605 110 aaKnown RBP1.1□□□□□ -2.23
CHD9-209ENST00000564255 C9orf153Q5TBE3 101 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 Q8N2B8 174 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 C3orf56Q8N813 242 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 SCGB3A1Q96QR1 104 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 CCDC88CQ9P219 2028 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 MALRD1Q5VYJ5 2156 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 TTC28Q96AY4 2481 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 A0A0D9SG52 128 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 C3orf85A0A1B0GTC6 90 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 HMSDA8MTL9 139 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 OOSP1A8MZH6 123 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 IBA57-AS1B1ANH7 110 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 APOC4-APOC2K7ER74 178 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 APOC2P02655 101 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 CCL4P13236 92 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 ZNF846Q147U1 533 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 FAM74A1Q5RGS3 127 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 EIF5AL1Q6IS14 154 aaKnown RBP1.1□□□□□ -2.23
CHD9-209ENST00000564255 SOSTDC1Q6X4U4 206 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 SIGLECL1Q8N7X8 197 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 RAB37Q96AX2 223 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 AQP10Q96PS8 301 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 BCL2L10Q9HD36 194 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 LINC00312Q9Y6C7 94 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 SERP1Q9Y6X1 66 aa1.1□□□□□ -2.23
CHD9-209ENST00000564255 A0A0G2JMZ2 1700 aa1.09□□□□□ -2.23
CHD9-209ENST00000564255 GBF1Q92538 1859 aa1.09□□□□□ -2.23
CHD9-209ENST00000564255 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.09□□□□□ -2.23
CHD9-209ENST00000564255 RBP4P02753 201 aa1.09□□□□□ -2.23
CHD9-209ENST00000564255 CD3DP04234 171 aa1.09□□□□□ -2.23
CHD9-209ENST00000564255 LINC00032P0C843 101 aa1.09□□□□□ -2.23
CHD9-209ENST00000564255 TRAPPC2P0DI81 140 aa1.09□□□□□ -2.23
CHD9-209ENST00000564255 TRAPPC2BP0DI82 140 aa1.09□□□□□ -2.23
CHD9-209ENST00000564255 IL7P13232 177 aa1.09□□□□□ -2.23
CHD9-209ENST00000564255 Q0VG73 95 aa1.09□□□□□ -2.23
CHD9-209ENST00000564255 PCOTHQ58A44 107 aa1.09□□□□□ -2.23
CHD9-209ENST00000564255 LSM10Q969L4 123 aaKnown RBP1.09□□□□□ -2.23
CHD9-209ENST00000564255 VAMP8Q9BV40 100 aa1.09□□□□□ -2.23
CHD9-209ENST00000564255 SAR1AQ9NR31 198 aa1.09□□□□□ -2.23
CHD9-209ENST00000564255 AP4S1Q9Y587 144 aa1.09□□□□□ -2.23
CHD9-209ENST00000564255 ANAPC1Q9H1A4 1944 aa1.09□□□□□ -2.23
CHD9-209ENST00000564255 DDX60LQ5H9U9 1706 aaKnown RBP1.09□□□□□ -2.24
CHD9-209ENST00000564255 COL4A6Q14031 1691 aa1.09□□□□□ -2.24
CHD9-209ENST00000564255 CHD8Q9HCK8 2581 aa1.09□□□□□ -2.24
CHD9-209ENST00000564255 MCRIP1C9JLW8 97 aa1.09□□□□□ -2.24
CHD9-209ENST00000564255 YPEL1O60688 119 aa1.09□□□□□ -2.24
CHD9-209ENST00000564255 PMP2P02689 132 aa1.09□□□□□ -2.24
CHD9-209ENST00000564255 LSM3P62310 102 aaKnown RBP1.09□□□□□ -2.24
CHD9-209ENST00000564255 DYNLT1P63172 113 aa1.09□□□□□ -2.24
CHD9-209ENST00000564255 KRTAP13-4Q3LI77 160 aa1.09□□□□□ -2.24
CHD9-209ENST00000564255 KRTAP5-7Q6L8G8 165 aa1.09□□□□□ -2.24
CHD9-209ENST00000564255 Q6ZS92 163 aa1.09□□□□□ -2.24
CHD9-209ENST00000564255 CCL4L1Q8NHW4 92 aa1.09□□□□□ -2.24
CHD9-209ENST00000564255 LINC00052Q96N35 136 aa1.09□□□□□ -2.24
CHD9-209ENST00000564255 ZNF714Q96N38 554 aa1.09□□□□□ -2.24
CHD9-209ENST00000564255 CACNA1GO43497 2377 aa1.09□□□□□ -2.24
CHD9-209ENST00000564255 ANK1P16157 1881 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 LOC107986453A0A1B0GWG9 222 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 LOC730098B7Z3J9 87 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 EDF1O60869 148 aaKnown RBP1.08□□□□□ -2.24
CHD9-209ENST00000564255 TCL1BO95988 128 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 TRACP01848 142 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 MT-ATP8P03928 68 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 FABP4P15090 132 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 CDK5R1Q15078 307 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 IQCJQ1A5X6 159 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 SPRNQ5BIV9 151 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 OR5AS1Q8N127 324 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 FAM216BQ8N7L0 139 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 C9orf163Q8N9P6 203 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 ATG5Q9H1Y0 275 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 MYH1P12882 1939 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 MYH8P13535 1937 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 FAM208BQ5VWN6 2430 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 PCLOQ9Y6V0 5065 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 ZDBF2Q9HCK1 2354 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 MRPS14O60783 128 aaKnown RBP1.08□□□□□ -2.24
CHD9-209ENST00000564255 ZNF737O75373 536 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 HYPMO75409 117 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 GYPBP06028 91 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 SAA1P0DJI8 122 aaPredicted RBP1.08□□□□□ -2.24
CHD9-209ENST00000564255 COX6A1P12074 109 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 IL9P15248 144 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 NPC2P61916 151 aa1.08□□□□□ -2.24
CHD9-209ENST00000564255 MRPS36P82909 103 aaKnown RBP1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms