RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 CAMPP49913 170 aa12.09□□□□□ -0.47
CMTM3-208ENST00000564247 HBBP68871 147 aa12.09□□□□□ -0.47
CMTM3-208ENST00000564247 MSRB1Q9NZV6 116 aa12.09□□□□□ -0.47
CMTM3-208ENST00000564247 TRBV24-1A0A075B6N3 115 aa12.08□□□□□ -0.48
CMTM3-208ENST00000564247 TGIF2-C20orf24A0A0A6YYL0 155 aa12.08□□□□□ -0.48
CMTM3-208ENST00000564247 A0A0J9YWU9 116 aa12.08□□□□□ -0.48
CMTM3-208ENST00000564247 DEFB130BP0DP73 79 aa12.08□□□□□ -0.48
CMTM3-208ENST00000564247 DEFB130AP0DP74 79 aa12.08□□□□□ -0.48
CMTM3-208ENST00000564247 COX19Q49B96 90 aa12.08□□□□□ -0.48
CMTM3-208ENST00000564247 RASL11AQ6T310 242 aa12.08□□□□□ -0.48
CMTM3-208ENST00000564247 AP1S3Q96PC3 154 aa12.08□□□□□ -0.48
CMTM3-208ENST00000564247 DAD1P61803 113 aa12.07□□□□□ -0.48
CMTM3-208ENST00000564247 OR4C5Q8NGB2 326 aa12.07□□□□□ -0.48
CMTM3-208ENST00000564247 FAM210BQ96KR6 192 aa12.07□□□□□ -0.48
CMTM3-208ENST00000564247 A0A1B0GXF2 115 aa12.06□□□□□ -0.48
CMTM3-208ENST00000564247 RS1O15537 224 aa12.06□□□□□ -0.48
CMTM3-208ENST00000564247 CIDEAO60543 219 aa12.06□□□□□ -0.48
CMTM3-208ENST00000564247 RAB4BP61018 213 aa12.06□□□□□ -0.48
CMTM3-208ENST00000564247 LYSTQ99698 3801 aa12.05□□□□□ -0.48
CMTM3-208ENST00000564247 TRAV4A0A0B4J268 109 aa12.05□□□□□ -0.48
CMTM3-208ENST00000564247 LINC00612Q8N6U2 182 aa12.05□□□□□ -0.48
CMTM3-208ENST00000564247 C14orf178Q8N769 122 aaPredicted RBP12.05□□□□□ -0.48
CMTM3-208ENST00000564247 C11orf45Q8TAV5 145 aa12.05□□□□□ -0.48
CMTM3-208ENST00000564247 YPEL4Q96NS1 127 aa12.05□□□□□ -0.48
CMTM3-208ENST00000564247 TMEM191AQ9H0A3 160 aa12.05□□□□□ -0.48
CMTM3-208ENST00000564247 DPH3P1Q9H4G8 78 aa12.05□□□□□ -0.48
CMTM3-208ENST00000564247 EVI2AP22794 236 aa12.04□□□□□ -0.48
CMTM3-208ENST00000564247 CFAP126Q5VTH2 177 aa12.04□□□□□ -0.48
CMTM3-208ENST00000564247 C18orf15Q96N68 181 aa12.04□□□□□ -0.48
CMTM3-208ENST00000564247 JPT2Q9H910 190 aa12.04□□□□□ -0.48
CMTM3-208ENST00000564247 CELA1Q9UNI1 258 aa12.04□□□□□ -0.48
CMTM3-208ENST00000564247 A0A087WWL8 130 aa12.03□□□□□ -0.48
CMTM3-208ENST00000564247 RHODO00212 210 aa12.03□□□□□ -0.48
CMTM3-208ENST00000564247 FAM74A4Q5TZK3 123 aa12.03□□□□□ -0.48
CMTM3-208ENST00000564247 GNB1LQ9BYB4 327 aa12.03□□□□□ -0.48
CMTM3-208ENST00000564247 COLCA2A8K830 154 aa12.02□□□□□ -0.49
CMTM3-208ENST00000564247 F5H697 171 aa12.02□□□□□ -0.49
CMTM3-208ENST00000564247 CRYGDP07320 174 aa12.02□□□□□ -0.49
CMTM3-208ENST00000564247 ZFP2Q6ZN57 461 aa12.02□□□□□ -0.49
CMTM3-208ENST00000564247 GATD1Q8NB37 220 aa12.02□□□□□ -0.49
CMTM3-208ENST00000564247 PLECQ15149 4684 aaKnown RBP12.02□□□□□ -0.49
CMTM3-208ENST00000564247 RYR2Q92736 4967 aa12.01□□□□□ -0.49
CMTM3-208ENST00000564247 IGHV3-53P01767 116 aa12.01□□□□□ -0.49
CMTM3-208ENST00000564247 MT-ND6P03923 174 aa12.01□□□□□ -0.49
CMTM3-208ENST00000564247 ATP5G1P05496 136 aa12.01□□□□□ -0.49
CMTM3-208ENST00000564247 MGPP08493 103 aa12.01□□□□□ -0.49
CMTM3-208ENST00000564247 FAM104BQ5XKR9 115 aa12.01□□□□□ -0.49
CMTM3-208ENST00000564247 TMEM136Q6ZRR5 245 aa12.01□□□□□ -0.49
CMTM3-208ENST00000564247 POM121L12Q8N7R1 296 aa12.01□□□□□ -0.49
CMTM3-208ENST00000564247 SAMD10Q9BYL1 202 aa12.01□□□□□ -0.49
CMTM3-208ENST00000564247 KIF25-AS1Q9Y6Z4 181 aa12.01□□□□□ -0.49
CMTM3-208ENST00000564247 DNAH1Q9P2D7 4330 aa12□□□□□ -0.49
CMTM3-208ENST00000564247 IGHV3-73A0A0B4J1V6 119 aa12□□□□□ -0.49
CMTM3-208ENST00000564247 TRGV4A0A0C4DH28 118 aa12□□□□□ -0.49
CMTM3-208ENST00000564247 LCE6AA0A183 80 aa12□□□□□ -0.49
CMTM3-208ENST00000564247 HLA-DQA1P01909 254 aa12□□□□□ -0.49
CMTM3-208ENST00000564247 ZNF56Q15929 161 aa12□□□□□ -0.49
CMTM3-208ENST00000564247 C12orf74Q32Q52 190 aa12□□□□□ -0.49
CMTM3-208ENST00000564247 ZNF479Q96JC4 524 aa12□□□□□ -0.49
CMTM3-208ENST00000564247 TRAPPC1Q9Y5R8 145 aa12□□□□□ -0.49
CMTM3-208ENST00000564247 APCSP02743 223 aa11.99□□□□□ -0.49
CMTM3-208ENST00000564247 RPS10P46783 165 aaKnown RBP11.99□□□□□ -0.49
CMTM3-208ENST00000564247 AMN1Q8IY45 258 aa11.99□□□□□ -0.49
CMTM3-208ENST00000564247 FRZBQ92765 325 aa11.99□□□□□ -0.49
CMTM3-208ENST00000564247 NACAE9PAV3 2078 aa11.98□□□□□ -0.49
CMTM3-208ENST00000564247 RAB4AP20338 218 aa11.98□□□□□ -0.49
CMTM3-208ENST00000564247 RAB5AP20339 215 aa11.98□□□□□ -0.49
CMTM3-208ENST00000564247 NANOS2P60321 138 aaKnown RBP11.98□□□□□ -0.49
CMTM3-208ENST00000564247 SLAQ13239 276 aa11.98□□□□□ -0.49
CMTM3-208ENST00000564247 LINC00315P59091 139 aa11.97□□□□□ -0.49
CMTM3-208ENST00000564247 FABP9Q0Z7S8 132 aa11.97□□□□□ -0.49
CMTM3-208ENST00000564247 UFSP1Q6NVU6 142 aa11.97□□□□□ -0.49
CMTM3-208ENST00000564247 MRPL18Q9H0U6 180 aaKnown RBP11.97□□□□□ -0.49
CMTM3-208ENST00000564247 F5H768 121 aa11.96□□□□□ -0.49
CMTM3-208ENST00000564247 H7C1H1 209 aa11.96□□□□□ -0.49
CMTM3-208ENST00000564247 HTN3P15516 51 aa11.96□□□□□ -0.49
CMTM3-208ENST00000564247 CKS2P33552 79 aa11.96□□□□□ -0.49
CMTM3-208ENST00000564247 FHL2Q14192 279 aa11.96□□□□□ -0.49
CMTM3-208ENST00000564247 MRPL51Q4U2R6 128 aaKnown RBP11.96□□□□□ -0.49
CMTM3-208ENST00000564247 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.96□□□□□ -0.49
CMTM3-208ENST00000564247 MRAP2Q96G30 205 aa11.96□□□□□ -0.49
CMTM3-208ENST00000564247 RNF185Q96GF1 192 aa11.96□□□□□ -0.49
CMTM3-208ENST00000564247 HHLA3Q9XRX5 114 aa11.96□□□□□ -0.49
CMTM3-208ENST00000564247 NUPR2A6NF83 97 aa11.95□□□□□ -0.5
CMTM3-208ENST00000564247 PPBPP02775 128 aa11.95□□□□□ -0.5
CMTM3-208ENST00000564247 Q6ZTC4 211 aa11.95□□□□□ -0.5
CMTM3-208ENST00000564247 ALMS1Q8TCU4 4167 aa11.95□□□□□ -0.5
CMTM3-208ENST00000564247 TRBV6-4A0A1B0GX49 114 aa11.94□□□□□ -0.5
CMTM3-208ENST00000564247 PPP1R17O96001 155 aa11.94□□□□□ -0.5
CMTM3-208ENST00000564247 GATA1P15976 413 aaPredicted RBP11.94□□□□□ -0.5
CMTM3-208ENST00000564247 SUMO4Q6EEV6 95 aa11.94□□□□□ -0.5
CMTM3-208ENST00000564247 PRO0255Q9UI72 69 aa11.94□□□□□ -0.5
CMTM3-208ENST00000564247 TRAV10A0A0B4J240 114 aa11.93□□□□□ -0.5
CMTM3-208ENST00000564247 HOXA5P20719 270 aa11.93□□□□□ -0.5
CMTM3-208ENST00000564247 Q6ZSN1 163 aa11.93□□□□□ -0.5
CMTM3-208ENST00000564247 ORMDL3Q8N138 153 aa11.93□□□□□ -0.5
CMTM3-208ENST00000564247 PRADC1Q9BSG0 188 aa11.93□□□□□ -0.5
CMTM3-208ENST00000564247 DEFB131BA0A096LNP1 70 aa11.92□□□□□ -0.5
CMTM3-208ENST00000564247 KIAA1644Q3SXP7 199 aa11.92□□□□□ -0.5
CMTM3-208ENST00000564247 CEMP1Q6PRD7 247 aaPredicted RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms