RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 COL6A3P12111 3177 aa4.47□□□□□ -1.69
TUBGCP4-207ENST00000563963 LINC00473A8K010 186 aa4.47□□□□□ -1.69
TUBGCP4-207ENST00000563963 WNT9BO14905 357 aa4.47□□□□□ -1.69
TUBGCP4-207ENST00000563963 PRSS2P07478 247 aa4.47□□□□□ -1.69
TUBGCP4-207ENST00000563963 CRIP2P52943 208 aaPredicted RBP4.47□□□□□ -1.69
TUBGCP4-207ENST00000563963 FAM216BQ8N7L0 139 aa4.47□□□□□ -1.69
TUBGCP4-207ENST00000563963 FLVCR1-AS1Q8TAF5 88 aa4.47□□□□□ -1.69
TUBGCP4-207ENST00000563963 Q9HAA7 133 aa4.47□□□□□ -1.69
TUBGCP4-207ENST00000563963 IGKV1D-8A0A087WSZ0 117 aa4.46□□□□□ -1.69
TUBGCP4-207ENST00000563963 TRBV30A0A0K0K1B3 111 aa4.46□□□□□ -1.69
TUBGCP4-207ENST00000563963 A0A1B0GUT8 65 aa4.46□□□□□ -1.69
TUBGCP4-207ENST00000563963 ZNF826PQ6ZT77 177 aa4.46□□□□□ -1.69
TUBGCP4-207ENST00000563963 CCL4L1Q8NHW4 92 aa4.46□□□□□ -1.69
TUBGCP4-207ENST00000563963 PCSK5Q92824 1860 aa4.46□□□□□ -1.7
TUBGCP4-207ENST00000563963 KLKP1Q107X0 134 aa4.46□□□□□ -1.7
TUBGCP4-207ENST00000563963 FAM53AQ6NSI3 398 aaPredicted RBP4.46□□□□□ -1.7
TUBGCP4-207ENST00000563963 Q6ZR03 302 aa4.46□□□□□ -1.7
TUBGCP4-207ENST00000563963 PROK2Q9HC23 129 aa4.46□□□□□ -1.7
TUBGCP4-207ENST00000563963 IGKV3D-7A0A0C4DH55 119 aa4.46□□□□□ -1.7
TUBGCP4-207ENST00000563963 BUB1B-PAK6H3BSN5 160 aa4.46□□□□□ -1.7
TUBGCP4-207ENST00000563963 LRRK1Q38SD2 2015 aa4.46□□□□□ -1.7
TUBGCP4-207ENST00000563963 ARRDC1-AS1Q9H2J1 176 aa4.46□□□□□ -1.7
TUBGCP4-207ENST00000563963 TRAV40A0A0B4J280 105 aa4.46□□□□□ -1.7
TUBGCP4-207ENST00000563963 IGKV1-9A0A0C4DH69 117 aa4.46□□□□□ -1.7
TUBGCP4-207ENST00000563963 C16orf47Q6ZP98 133 aaPredicted RBP4.46□□□□□ -1.7
TUBGCP4-207ENST00000563963 PRNTQ86SH4 94 aa4.46□□□□□ -1.7
TUBGCP4-207ENST00000563963 ODF3L1Q8IXM7 274 aa4.46□□□□□ -1.7
TUBGCP4-207ENST00000563963 MAPKAPK5-AS1Q8N8E1 139 aa4.46□□□□□ -1.7
TUBGCP4-207ENST00000563963 DIRC1Q969H9 104 aa4.46□□□□□ -1.7
TUBGCP4-207ENST00000563963 AGRNO00468 2067 aa4.46□□□□□ -1.7
TUBGCP4-207ENST00000563963 PTPRBP23467 1997 aa4.45□□□□□ -1.7
TUBGCP4-207ENST00000563963 TMEM223A0PJW6 202 aa4.45□□□□□ -1.7
TUBGCP4-207ENST00000563963 H7C423 109 aa4.45□□□□□ -1.7
TUBGCP4-207ENST00000563963 M0R3E3 92 aa4.45□□□□□ -1.7
TUBGCP4-207ENST00000563963 PRB4P10163 310 aaPredicted RBP4.45□□□□□ -1.7
TUBGCP4-207ENST00000563963 RITA1Q96K30 269 aa4.45□□□□□ -1.7
TUBGCP4-207ENST00000563963 SPEGQ15772 3267 aa4.45□□□□□ -1.7
TUBGCP4-207ENST00000563963 ALPK2Q86TB3 2170 aa4.45□□□□□ -1.7
TUBGCP4-207ENST00000563963 IBA57-AS1B1ANH7 110 aa4.45□□□□□ -1.7
TUBGCP4-207ENST00000563963 IGHV3-33P01772 117 aa4.45□□□□□ -1.7
TUBGCP4-207ENST00000563963 LINC01554Q52M75 96 aa4.45□□□□□ -1.7
TUBGCP4-207ENST00000563963 CCL28Q9NRJ3 127 aa4.45□□□□□ -1.7
TUBGCP4-207ENST00000563963 IGHV1-45A0A0A0MS14 117 aa4.45□□□□□ -1.7
TUBGCP4-207ENST00000563963 ATP1A1-AS1Q5TC04 95 aa4.45□□□□□ -1.7
TUBGCP4-207ENST00000563963 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.45□□□□□ -1.73e-7■■■■■ 26.8
TUBGCP4-207ENST00000563963 A0A087WZ39 114 aa4.44□□□□□ -1.7
TUBGCP4-207ENST00000563963 PRM2P04554 102 aa4.44□□□□□ -1.7
TUBGCP4-207ENST00000563963 PATE1Q8WXA2 126 aa4.44□□□□□ -1.7
TUBGCP4-207ENST00000563963 PHLDA3Q9Y5J5 127 aa4.44□□□□□ -1.7
TUBGCP4-207ENST00000563963 EML6Q6ZMW3 1958 aa4.44□□□□□ -1.7
TUBGCP4-207ENST00000563963 IGHV1-69DA0A0B4J2H0 117 aa4.44□□□□□ -1.7
TUBGCP4-207ENST00000563963 PIGYQ3MUY2 71 aa4.44□□□□□ -1.7
TUBGCP4-207ENST00000563963 NDUFA3O95167 84 aa4.44□□□□□ -1.7
TUBGCP4-207ENST00000563963 MED14OSP0DP75 135 aa4.44□□□□□ -1.7
TUBGCP4-207ENST00000563963 MED13Q9UHV7 2174 aa4.44□□□□□ -1.7
TUBGCP4-207ENST00000563963 F8P00451 2351 aa4.44□□□□□ -1.7
TUBGCP4-207ENST00000563963 IGKV1D-13A0A0B4J2D9 117 aa4.44□□□□□ -1.7
TUBGCP4-207ENST00000563963 C12orf77C9JDV5 145 aa4.44□□□□□ -1.7
TUBGCP4-207ENST00000563963 IGKV1-13P0DP09 117 aa4.44□□□□□ -1.7
TUBGCP4-207ENST00000563963 LINC00313P59037 77 aa4.44□□□□□ -1.7
TUBGCP4-207ENST00000563963 TFF3Q07654 80 aa4.44□□□□□ -1.7
TUBGCP4-207ENST00000563963 LINC00269Q8N2A0 174 aa4.44□□□□□ -1.7
TUBGCP4-207ENST00000563963 SETD2Q9BYW2 2564 aaPredicted RBP4.43□□□□□ -1.7
TUBGCP4-207ENST00000563963 ADARB2-AS1A8MUL3 147 aa4.43□□□□□ -1.7
TUBGCP4-207ENST00000563963 IGKV1-5P01602 117 aa4.43□□□□□ -1.7
TUBGCP4-207ENST00000563963 IGKV3-11P04433 115 aa4.43□□□□□ -1.7
TUBGCP4-207ENST00000563963 GPHB5Q86YW7 130 aa4.43□□□□□ -1.7
TUBGCP4-207ENST00000563963 FAM30AQ9NZY2 134 aa4.43□□□□□ -1.7
TUBGCP4-207ENST00000563963 LOC100131303A0A0U1RQF7 123 aa4.43□□□□□ -1.7
TUBGCP4-207ENST00000563963 EGR2P11161 476 aaPredicted RBP4.43□□□□□ -1.7
TUBGCP4-207ENST00000563963 LYPD5Q6UWN5 251 aa4.43□□□□□ -1.7
TUBGCP4-207ENST00000563963 SCXQ7RTU7 201 aa4.43□□□□□ -1.7
TUBGCP4-207ENST00000563963 ITLN1Q8WWA0 313 aa4.43□□□□□ -1.7
TUBGCP4-207ENST00000563963 ITLN2Q8WWU7 325 aaPredicted RBP4.43□□□□□ -1.7
TUBGCP4-207ENST00000563963 SPRR3Q9UBC9 169 aa4.43□□□□□ -1.7
TUBGCP4-207ENST00000563963 ANKHD1Q8IWZ3 2542 aaKnown RBP4.43□□□□□ -1.7
TUBGCP4-207ENST00000563963 ARHGAP21Q5T5U3 1957 aa4.42□□□□□ -1.7
TUBGCP4-207ENST00000563963 ZNHIT1O43257 154 aa4.42□□□□□ -1.7
TUBGCP4-207ENST00000563963 HOXA4Q00056 320 aaPredicted RBP4.42□□□□□ -1.7
TUBGCP4-207ENST00000563963 FAM168AQ92567 244 aa4.42□□□□□ -1.7
TUBGCP4-207ENST00000563963 PLXNB1O43157 2135 aa4.42□□□□□ -1.7
TUBGCP4-207ENST00000563963 CLPSP04118 112 aa4.42□□□□□ -1.7
TUBGCP4-207ENST00000563963 Q1T7F1 81 aa4.42□□□□□ -1.7
TUBGCP4-207ENST00000563963 C10orf128Q5T292 105 aa4.42□□□□□ -1.7
TUBGCP4-207ENST00000563963 DEFB126Q9BYW3 111 aa4.42□□□□□ -1.7
TUBGCP4-207ENST00000563963 TET1Q8NFU7 2136 aa4.42□□□□□ -1.7
TUBGCP4-207ENST00000563963 PCNX3Q9H6A9 2034 aa4.42□□□□□ -1.7
TUBGCP4-207ENST00000563963 PRUNE2Q8WUY3 3088 aa4.42□□□□□ -1.7
TUBGCP4-207ENST00000563963 F8VRH5 84 aa4.42□□□□□ -1.7
TUBGCP4-207ENST00000563963 SPANXN1Q5VSR9 72 aa4.42□□□□□ -1.7
TUBGCP4-207ENST00000563963 SMCR5Q8TEV8 140 aa4.42□□□□□ -1.7
TUBGCP4-207ENST00000563963 ZNF524Q96C55 264 aa4.42□□□□□ -1.7
TUBGCP4-207ENST00000563963 TRAV23DV6A0A075B6W5 121 aa4.42□□□□□ -1.7
TUBGCP4-207ENST00000563963 MYO7BQ6PIF6 2116 aa4.42□□□□□ -1.7
TUBGCP4-207ENST00000563963 USP24Q9UPU5 2620 aa4.41□□□□□ -1.7
TUBGCP4-207ENST00000563963 WISP2O76076 250 aa4.41□□□□□ -1.7
TUBGCP4-207ENST00000563963 FAM27BQ5VT28 67 aa4.41□□□□□ -1.7
TUBGCP4-207ENST00000563963 UBE2D4Q9Y2X8 147 aa4.41□□□□□ -1.7
TUBGCP4-207ENST00000563963 Q8N6K4 173 aa4.41□□□□□ -1.7
TUBGCP4-207ENST00000563963 TMEM141Q96I45 108 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms