RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 A0A1W2PRE2 83 aa6.75□□□□□ -1.33
SF3B3-204ENST00000563739 RBAKDNA6NC62 111 aa6.75□□□□□ -1.33
SF3B3-204ENST00000563739 FAM74A7A6NL05 159 aa6.75□□□□□ -1.33
SF3B3-204ENST00000563739 IGHV3-30P01768 117 aa6.75□□□□□ -1.33
SF3B3-204ENST00000563739 IGHV3-33P01772 117 aa6.75□□□□□ -1.33
SF3B3-204ENST00000563739 IGHV3-30-3P0DP02 117 aa6.75□□□□□ -1.33
SF3B3-204ENST00000563739 IGHV3-30-5P0DP03 117 aa6.75□□□□□ -1.33
SF3B3-204ENST00000563739 GATA1P15976 413 aaPredicted RBP6.75□□□□□ -1.33
SF3B3-204ENST00000563739 GNG5P63218 68 aa6.75□□□□□ -1.33
SF3B3-204ENST00000563739 FAM74A3Q4VXF1 159 aa6.75□□□□□ -1.33
SF3B3-204ENST00000563739 ARL6IP6Q8N6S5 226 aa6.75□□□□□ -1.33
SF3B3-204ENST00000563739 CYB561D1Q8N8Q1 229 aa6.75□□□□□ -1.33
SF3B3-204ENST00000563739 C5orf17Q8NAS9 161 aa6.75□□□□□ -1.33
SF3B3-204ENST00000563739 LINC00477Q96M19 166 aa6.75□□□□□ -1.33
SF3B3-204ENST00000563739 ZNF492Q9P255 531 aa6.75□□□□□ -1.33
SF3B3-204ENST00000563739 RPH3ALQ9UNE2 315 aa6.75□□□□□ -1.33
SF3B3-204ENST00000563739 TRAV4A0A0B4J268 109 aa6.74□□□□□ -1.33
SF3B3-204ENST00000563739 IGLV2-8P01709 118 aa6.74□□□□□ -1.33
SF3B3-204ENST00000563739 ORM1P02763 201 aa6.74□□□□□ -1.33
SF3B3-204ENST00000563739 ZNF138P52744 262 aa6.74□□□□□ -1.33
SF3B3-204ENST00000563739 UBE2G2P60604 165 aa6.74□□□□□ -1.33
SF3B3-204ENST00000563739 LAGE3Q14657 143 aa6.74□□□□□ -1.33
SF3B3-204ENST00000563739 ODF1Q14990 250 aa6.74□□□□□ -1.33
SF3B3-204ENST00000563739 MUC21Q5SSG8 566 aa6.74□□□□□ -1.33
SF3B3-204ENST00000563739 GOLT1AQ6ZVE7 132 aa6.74□□□□□ -1.33
SF3B3-204ENST00000563739 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.74□□□□□ -1.33
SF3B3-204ENST00000563739 ARL2-SNX15V9GYD0 113 aa6.74□□□□□ -1.33
SF3B3-204ENST00000563739 IGHV3-16A0A0C4DH30 117 aa6.73□□□□□ -1.33
SF3B3-204ENST00000563739 TRBV7-9A0A0J9YWB2 115 aa6.73□□□□□ -1.33
SF3B3-204ENST00000563739 SERTM2A0A1B0GWG4 89 aa6.73□□□□□ -1.33
SF3B3-204ENST00000563739 C7orf77A4D0Y5 90 aa6.73□□□□□ -1.33
SF3B3-204ENST00000563739 PAGE4O60829 102 aa6.73□□□□□ -1.33
SF3B3-204ENST00000563739 TCRAP04437 139 aa6.73□□□□□ -1.33
SF3B3-204ENST00000563739 GPX1P07203 203 aa6.73□□□□□ -1.33
SF3B3-204ENST00000563739 LINC00694P0DN24 101 aa6.73□□□□□ -1.33
SF3B3-204ENST00000563739 MEF2BQ02080 365 aaPredicted RBP6.73□□□□□ -1.33
SF3B3-204ENST00000563739 TXNDC17Q9BRA2 123 aa6.73□□□□□ -1.33
SF3B3-204ENST00000563739 TRAV8-1A0A0A6YYK1 113 aa6.72□□□□□ -1.33
SF3B3-204ENST00000563739 C9JCJ5 164 aa6.72□□□□□ -1.33
SF3B3-204ENST00000563739 TMEM250H0YL14 139 aa6.72□□□□□ -1.33
SF3B3-204ENST00000563739 M0R036 132 aa6.72□□□□□ -1.33
SF3B3-204ENST00000563739 CEBPGP53567 150 aa6.72□□□□□ -1.33
SF3B3-204ENST00000563739 SUMO1P63165 101 aaKnown RBP6.72□□□□□ -1.33
SF3B3-204ENST00000563739 RHEBQ15382 184 aa6.72□□□□□ -1.33
SF3B3-204ENST00000563739 CBLN2Q8IUK8 224 aa6.72□□□□□ -1.33
SF3B3-204ENST00000563739 TVP23CQ96ET8 276 aa6.72□□□□□ -1.33
SF3B3-204ENST00000563739 RPS10P5Q9NQ39 176 aa6.72□□□□□ -1.33
SF3B3-204ENST00000563739 SMCO4Q9NRQ5 59 aa6.72□□□□□ -1.33
SF3B3-204ENST00000563739 TMA7Q9Y2S6 64 aaKnown RBP6.72□□□□□ -1.33
SF3B3-204ENST00000563739 LENEPQ9Y5L5 61 aa6.72□□□□□ -1.33
SF3B3-204ENST00000563739 PANO1I0J062 215 aa6.71□□□□□ -1.34
SF3B3-204ENST00000563739 K7EQM0 130 aa6.71□□□□□ -1.34
SF3B3-204ENST00000563739 PEX7O00628 323 aa6.71□□□□□ -1.34
SF3B3-204ENST00000563739 TMEM183BQ1AE95 376 aa6.71□□□□□ -1.34
SF3B3-204ENST00000563739 LELP1Q5T871 98 aa6.71□□□□□ -1.34
SF3B3-204ENST00000563739 Q6AWC8 147 aa6.71□□□□□ -1.34
SF3B3-204ENST00000563739 DAZ4Q86SG3 579 aaKnown RBP6.71□□□□□ -1.34
SF3B3-204ENST00000563739 TMEM183AQ8IXX5 376 aa6.71□□□□□ -1.34
SF3B3-204ENST00000563739 SLC25A29Q8N8R3 303 aa6.71□□□□□ -1.34
SF3B3-204ENST00000563739 TMEM75Q8N9X5 138 aa6.71□□□□□ -1.34
SF3B3-204ENST00000563739 BAALCQ8WXS3 180 aa6.71□□□□□ -1.34
SF3B3-204ENST00000563739 TCEAL7Q9BRU2 100 aa6.71□□□□□ -1.34
SF3B3-204ENST00000563739 SDF2L1Q9HCN8 221 aa6.71□□□□□ -1.34
SF3B3-204ENST00000563739 DAZ3Q9NR90 486 aaKnown RBP6.71□□□□□ -1.34
SF3B3-204ENST00000563739 EPDR1Q9UM22 224 aa6.71□□□□□ -1.34
SF3B3-204ENST00000563739 A0A087WWC5 75 aa6.7□□□□□ -1.34
SF3B3-204ENST00000563739 FBLL1A6NHQ2 334 aaKnown RBP6.7□□□□□ -1.34
SF3B3-204ENST00000563739 ZNF727A8MUV8 499 aa6.7□□□□□ -1.34
SF3B3-204ENST00000563739 B4DEV8 164 aa6.7□□□□□ -1.34
SF3B3-204ENST00000563739 F6UZH7 168 aa6.7□□□□□ -1.34
SF3B3-204ENST00000563739 PDE6DO43924 150 aa6.7□□□□□ -1.34
SF3B3-204ENST00000563739 IGLV2-11P01706 119 aa6.7□□□□□ -1.34
SF3B3-204ENST00000563739 RPL37AP61513 92 aaKnown RBP6.7□□□□□ -1.34
SF3B3-204ENST00000563739 PNRC1Q12796 327 aaPredicted RBP6.7□□□□□ -1.34
SF3B3-204ENST00000563739 TDRG1Q3Y452 100 aa6.7□□□□□ -1.34
SF3B3-204ENST00000563739 CST9LP1Q5W188 147 aa6.7□□□□□ -1.34
SF3B3-204ENST00000563739 HIST1H2BAQ96A08 127 aa6.7□□□□□ -1.34
SF3B3-204ENST00000563739 SGK494Q96LW2 274 aa6.7□□□□□ -1.34
SF3B3-204ENST00000563739 SPXQ9BT56 116 aa6.7□□□□□ -1.34
SF3B3-204ENST00000563739 Q9UF83 564 aa6.7□□□□□ -1.34
SF3B3-204ENST00000563739 NAT8Q9UHE5 227 aa6.7□□□□□ -1.34
SF3B3-204ENST00000563739 PSG8Q9UQ74 426 aa6.7□□□□□ -1.34
SF3B3-204ENST00000563739 AKR1C3P42330 323 aa6.69□□□□□ -1.34
SF3B3-204ENST00000563739 FLI1Q01543 452 aaPredicted RBP6.69□□□□□ -1.34
SF3B3-204ENST00000563739 TMEM241Q24JQ0 296 aa6.69□□□□□ -1.34
SF3B3-204ENST00000563739 OR10J3Q5JRS4 329 aa6.69□□□□□ -1.34
SF3B3-204ENST00000563739 Q86TA4 180 aa6.69□□□□□ -1.34
SF3B3-204ENST00000563739 C15orf54Q8N8G6 183 aa6.69□□□□□ -1.34
SF3B3-204ENST00000563739 NHLRC2Q8NBF2 726 aa6.69□□□□□ -1.34
SF3B3-204ENST00000563739 NDFIP1Q9BT67 221 aa6.69□□□□□ -1.34
SF3B3-204ENST00000563739 TRAV34A0A0B4J273 112 aa6.68□□□□□ -1.34
SF3B3-204ENST00000563739 COLCA2A8K830 154 aa6.68□□□□□ -1.34
SF3B3-204ENST00000563739 RS1O15537 224 aa6.68□□□□□ -1.34
SF3B3-204ENST00000563739 GNRH2O43555 120 aa6.68□□□□□ -1.34
SF3B3-204ENST00000563739 GHRHP01286 108 aa6.68□□□□□ -1.34
SF3B3-204ENST00000563739 TYMSP04818 313 aa6.68□□□□□ -1.34
SF3B3-204ENST00000563739 ASIPP42127 132 aa6.68□□□□□ -1.34
SF3B3-204ENST00000563739 PRNTQ86SH4 94 aa6.68□□□□□ -1.34
SF3B3-204ENST00000563739 OR4C5Q8NGB2 326 aa6.68□□□□□ -1.34
SF3B3-204ENST00000563739 LINC00479Q96M42 142 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms