RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 FAT2Q9NYQ8 4349 aa6.35□□□□□ -1.39
CHRFAM7A-204ENST00000562729 PKHD1P08F94 4074 aa6.35□□□□□ -1.39
CHRFAM7A-204ENST00000562729 IGHV3-38A0A0C4DH36 116 aa6.34□□□□□ -1.39
CHRFAM7A-204ENST00000562729 KRBOX1C9JBD0 128 aa6.34□□□□□ -1.39
CHRFAM7A-204ENST00000562729 M0R381 172 aa6.34□□□□□ -1.39
CHRFAM7A-204ENST00000562729 LTAP01374 205 aa6.34□□□□□ -1.39
CHRFAM7A-204ENST00000562729 ARMS2P0C7Q2 107 aa6.34□□□□□ -1.39
CHRFAM7A-204ENST00000562729 PRR27Q6MZM9 219 aa6.34□□□□□ -1.39
CHRFAM7A-204ENST00000562729 ZFP2Q6ZN57 461 aa6.34□□□□□ -1.39
CHRFAM7A-204ENST00000562729 ATP6V0E2Q8NHE4 81 aa6.34□□□□□ -1.39
CHRFAM7A-204ENST00000562729 MBD3L1Q8WWY6 194 aa6.34□□□□□ -1.39
CHRFAM7A-204ENST00000562729 GNG13Q9P2W3 67 aa6.34□□□□□ -1.39
CHRFAM7A-204ENST00000562729 PKD1P98161 4303 aa6.33□□□□□ -1.4
CHRFAM7A-204ENST00000562729 DNAH17Q9UFH2 4485 aa6.33□□□□□ -1.4
CHRFAM7A-204ENST00000562729 GAGE12JA6NER3 117 aa6.33□□□□□ -1.4
CHRFAM7A-204ENST00000562729 RHODO00212 210 aa6.33□□□□□ -1.4
CHRFAM7A-204ENST00000562729 DNAH10OSP0CZ25 163 aa6.33□□□□□ -1.4
CHRFAM7A-204ENST00000562729 GAGE1Q13065 139 aa6.33□□□□□ -1.4
CHRFAM7A-204ENST00000562729 GAGE4Q13068 117 aa6.33□□□□□ -1.4
CHRFAM7A-204ENST00000562729 GAGE5Q13069 117 aa6.33□□□□□ -1.4
CHRFAM7A-204ENST00000562729 GAGE13Q4V321 117 aa6.33□□□□□ -1.4
CHRFAM7A-204ENST00000562729 PIK3CD-AS1Q5SR53 167 aa6.33□□□□□ -1.4
CHRFAM7A-204ENST00000562729 BAGE2Q86Y30 109 aa6.33□□□□□ -1.4
CHRFAM7A-204ENST00000562729 ZFP82Q8N141 532 aa6.33□□□□□ -1.4
CHRFAM7A-204ENST00000562729 GTSF1LQ9H1H1 148 aa6.33□□□□□ -1.4
CHRFAM7A-204ENST00000562729 PARLQ9H300 379 aa6.33□□□□□ -1.4
CHRFAM7A-204ENST00000562729 MANBALQ9NQG1 85 aa6.33□□□□□ -1.4
CHRFAM7A-204ENST00000562729 TNFRSF18Q9Y5U5 241 aa6.33□□□□□ -1.4
CHRFAM7A-204ENST00000562729 URGCP-MRPS24S4R325 110 aa6.33□□□□□ -1.4
CHRFAM7A-204ENST00000562729 A0A087WWL8 130 aa6.32□□□□□ -1.4
CHRFAM7A-204ENST00000562729 TRBV6-1A0A0K0K1D8 114 aa6.32□□□□□ -1.4
CHRFAM7A-204ENST00000562729 IFNA1P01562 189 aa6.32□□□□□ -1.4
CHRFAM7A-204ENST00000562729 IGHV3-30P01768 117 aa6.32□□□□□ -1.4
CHRFAM7A-204ENST00000562729 IGHV3-33P01772 117 aa6.32□□□□□ -1.4
CHRFAM7A-204ENST00000562729 IGHV3-30-3P0DP02 117 aa6.32□□□□□ -1.4
CHRFAM7A-204ENST00000562729 IGHV3-30-5P0DP03 117 aa6.32□□□□□ -1.4
CHRFAM7A-204ENST00000562729 CRIP1P50238 77 aa6.32□□□□□ -1.4
CHRFAM7A-204ENST00000562729 RAB5CP51148 216 aa6.32□□□□□ -1.4
CHRFAM7A-204ENST00000562729 TIRAPP58753 221 aa6.32□□□□□ -1.4
CHRFAM7A-204ENST00000562729 ZNF674Q2M3X9 581 aa6.32□□□□□ -1.4
CHRFAM7A-204ENST00000562729 LELP1Q5T871 98 aa6.32□□□□□ -1.4
CHRFAM7A-204ENST00000562729 KRTAP5-3Q6L8H2 238 aa6.32□□□□□ -1.4
CHRFAM7A-204ENST00000562729 KCNIP4Q6PIL6 250 aa6.32□□□□□ -1.4
CHRFAM7A-204ENST00000562729 Q9HAA7 133 aa6.32□□□□□ -1.4
CHRFAM7A-204ENST00000562729 SSTP61278 116 aa6.31□□□□□ -1.4
CHRFAM7A-204ENST00000562729 SPANXN1Q5VSR9 72 aa6.31□□□□□ -1.4
CHRFAM7A-204ENST00000562729 COX8CQ7Z4L0 72 aa6.31□□□□□ -1.4
CHRFAM7A-204ENST00000562729 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.31□□□□□ -1.4
CHRFAM7A-204ENST00000562729 DAZAP1Q96EP5 407 aaKnown RBP6.31□□□□□ -1.4
CHRFAM7A-204ENST00000562729 JPT2Q9H910 190 aa6.31□□□□□ -1.4
CHRFAM7A-204ENST00000562729 A0A087WWC5 75 aa6.3□□□□□ -1.4
CHRFAM7A-204ENST00000562729 CDK2AP2O75956 126 aa6.3□□□□□ -1.4
CHRFAM7A-204ENST00000562729 SMIM17P0DL12 118 aa6.3□□□□□ -1.4
CHRFAM7A-204ENST00000562729 RPL35P42766 123 aaKnown RBP6.3□□□□□ -1.4
CHRFAM7A-204ENST00000562729 ZNF56Q15929 161 aa6.3□□□□□ -1.4
CHRFAM7A-204ENST00000562729 LINC01556Q5JQF7 62 aa6.3□□□□□ -1.4
CHRFAM7A-204ENST00000562729 DNLZQ5SXM8 178 aa6.3□□□□□ -1.4
CHRFAM7A-204ENST00000562729 MAPKAPK5-AS1Q8N8E1 139 aa6.3□□□□□ -1.4
CHRFAM7A-204ENST00000562729 SFRP2Q96HF1 295 aa6.3□□□□□ -1.4
CHRFAM7A-204ENST00000562729 TPPP3Q9BW30 176 aa6.3□□□□□ -1.4
CHRFAM7A-204ENST00000562729 SAMD10Q9BYL1 202 aa6.3□□□□□ -1.4
CHRFAM7A-204ENST00000562729 hCG_2014768A0A024R1R8 64 aa6.29□□□□□ -1.4
CHRFAM7A-204ENST00000562729 A0A087WTM6 91 aa6.29□□□□□ -1.4
CHRFAM7A-204ENST00000562729 F5H697 171 aa6.29□□□□□ -1.4
CHRFAM7A-204ENST00000562729 GNG4P50150 75 aa6.29□□□□□ -1.4
CHRFAM7A-204ENST00000562729 LINC00310P59036 64 aa6.29□□□□□ -1.4
CHRFAM7A-204ENST00000562729 KRTAP10-2P60368 255 aa6.29□□□□□ -1.4
CHRFAM7A-204ENST00000562729 RPL36AP83881 106 aaKnown RBP6.29□□□□□ -1.4
CHRFAM7A-204ENST00000562729 RPL19P84098 196 aaKnown RBP6.29□□□□□ -1.4
CHRFAM7A-204ENST00000562729 TOR2AQ5JU69 321 aa6.29□□□□□ -1.4
CHRFAM7A-204ENST00000562729 Q6ZRN7 208 aaPredicted RBP6.29□□□□□ -1.4
CHRFAM7A-204ENST00000562729 Q6ZSN1 163 aa6.29□□□□□ -1.4
CHRFAM7A-204ENST00000562729 AKAP14Q86UN6 197 aa6.29□□□□□ -1.4
CHRFAM7A-204ENST00000562729 TCTE3Q8IZS6 198 aa6.29□□□□□ -1.4
CHRFAM7A-204ENST00000562729 C14orf178Q8N769 122 aaPredicted RBP6.29□□□□□ -1.4
CHRFAM7A-204ENST00000562729 RPL36ALQ969Q0 106 aaKnown RBP6.29□□□□□ -1.4
CHRFAM7A-204ENST00000562729 PDE6DO43924 150 aa6.28□□□□□ -1.4
CHRFAM7A-204ENST00000562729 C1QBP02746 253 aa6.28□□□□□ -1.4
CHRFAM7A-204ENST00000562729 CENPWQ5EE01 88 aa6.28□□□□□ -1.4
CHRFAM7A-204ENST00000562729 SLC51BQ86UW2 128 aa6.28□□□□□ -1.4
CHRFAM7A-204ENST00000562729 TM2D2Q9BX73 214 aa6.28□□□□□ -1.4
CHRFAM7A-204ENST00000562729 MED9Q9NWA0 146 aa6.28□□□□□ -1.4
CHRFAM7A-204ENST00000562729 A0A087WX48 190 aa6.27□□□□□ -1.41
CHRFAM7A-204ENST00000562729 TRAV1-1A0A0B4J248 108 aa6.27□□□□□ -1.41
CHRFAM7A-204ENST00000562729 MUC21A0A0G2JKD1 596 aa6.27□□□□□ -1.41
CHRFAM7A-204ENST00000562729 TRBV10-1A0A0K0K1A3 114 aa6.27□□□□□ -1.41
CHRFAM7A-204ENST00000562729 MUC21A0A140T8X8 626 aa6.27□□□□□ -1.41
CHRFAM7A-204ENST00000562729 XKRY2A2RUG3 117 aa6.27□□□□□ -1.41
CHRFAM7A-204ENST00000562729 IBA57-AS1B1ANH7 110 aa6.27□□□□□ -1.41
CHRFAM7A-204ENST00000562729 FUSP35637 526 aaKnown RBP eCLIP6.27□□□□□ -1.41
CHRFAM7A-204ENST00000562729 SULT1A2P50226 295 aa6.27□□□□□ -1.41
CHRFAM7A-204ENST00000562729 RAB4BP61018 213 aa6.27□□□□□ -1.41
CHRFAM7A-204ENST00000562729 CCL20P78556 96 aa6.27□□□□□ -1.41
CHRFAM7A-204ENST00000562729 MEF2BQ02080 365 aaPredicted RBP6.27□□□□□ -1.41
CHRFAM7A-204ENST00000562729 OR10AG1Q8NH19 301 aa6.27□□□□□ -1.41
CHRFAM7A-204ENST00000562729 SCRT2Q9NQ03 307 aa6.27□□□□□ -1.41
CHRFAM7A-204ENST00000562729 BIN3Q9NQY0 253 aa6.27□□□□□ -1.41
CHRFAM7A-204ENST00000562729 HERC2O95714 4834 aa6.27□□□□□ -1.41
CHRFAM7A-204ENST00000562729 KIAA1109Q2LD37 5005 aa6.26□□□□□ -1.41
CHRFAM7A-204ENST00000562729 TRBV7-3A0A075B6L6 115 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms