RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 HOXA3O43365 443 aaPredicted RBP5.62□□□□□ -1.51
CFDP1-202ENST00000562602 ELANEP08246 267 aa5.62□□□□□ -1.51
CFDP1-202ENST00000562602 POLR2KP53803 58 aaKnown RBP5.62□□□□□ -1.51
CFDP1-202ENST00000562602 FXYD2P54710 66 aa5.62□□□□□ -1.51
CFDP1-202ENST00000562602 RIPPLY3P57055 190 aa5.62□□□□□ -1.51
CFDP1-202ENST00000562602 LY6DQ14210 128 aa5.62□□□□□ -1.51
CFDP1-202ENST00000562602 PMVKQ15126 192 aa5.62□□□□□ -1.51
CFDP1-202ENST00000562602 C12orf74Q32Q52 190 aa5.62□□□□□ -1.51
CFDP1-202ENST00000562602 BRD3OSQ6XYD6 125 aa5.62□□□□□ -1.51
CFDP1-202ENST00000562602 LINC01356Q8N9X3 169 aa5.62□□□□□ -1.51
CFDP1-202ENST00000562602 PHLDA1Q8WV24 401 aaPredicted RBP5.62□□□□□ -1.51
CFDP1-202ENST00000562602 BAALCQ8WXS3 180 aa5.62□□□□□ -1.51
CFDP1-202ENST00000562602 ZNF479Q96JC4 524 aa5.62□□□□□ -1.51
CFDP1-202ENST00000562602 JMJD8Q96S16 334 aa5.62□□□□□ -1.51
CFDP1-202ENST00000562602 NHP2Q9NX24 153 aaKnown RBP5.62□□□□□ -1.51
CFDP1-202ENST00000562602 KIF25-AS1Q9Y6Z4 181 aa5.62□□□□□ -1.51
CFDP1-202ENST00000562602 PIEZO2Q9H5I5 2752 aa5.62□□□□□ -1.51
CFDP1-202ENST00000562602 IGHV3OR16-10A0A075B7F0 116 aa5.61□□□□□ -1.51
CFDP1-202ENST00000562602 TRAV2A0A0B4J234 112 aa5.61□□□□□ -1.51
CFDP1-202ENST00000562602 TRBV27A0A0K0K1C4 114 aa5.61□□□□□ -1.51
CFDP1-202ENST00000562602 C11orf86A6NJI1 115 aa5.61□□□□□ -1.51
CFDP1-202ENST00000562602 C19orf84I3L1E1 186 aa5.61□□□□□ -1.51
CFDP1-202ENST00000562602 IGHV3-11P01762 117 aa5.61□□□□□ -1.51
CFDP1-202ENST00000562602 IGHV4-38-2P0DP08 117 aa5.61□□□□□ -1.51
CFDP1-202ENST00000562602 PSMB8P28062 276 aa5.61□□□□□ -1.51
CFDP1-202ENST00000562602 CRYBA4P53673 196 aa5.61□□□□□ -1.51
CFDP1-202ENST00000562602 LY6EQ16553 131 aa5.61□□□□□ -1.51
CFDP1-202ENST00000562602 RRN3P1Q2M238 152 aa5.61□□□□□ -1.51
CFDP1-202ENST00000562602 PIK3CD-AS1Q5SR53 167 aa5.61□□□□□ -1.51
CFDP1-202ENST00000562602 TRPT1Q86TN4 253 aaKnown RBP5.61□□□□□ -1.51
CFDP1-202ENST00000562602 DCANP1Q8TF63 244 aa5.61□□□□□ -1.51
CFDP1-202ENST00000562602 VCX2Q9H322 139 aa5.61□□□□□ -1.51
CFDP1-202ENST00000562602 LINC00527Q9UJ94 153 aa5.61□□□□□ -1.51
CFDP1-202ENST00000562602 RELNP78509 3460 aa5.6□□□□□ -1.51
CFDP1-202ENST00000562602 TRBV7-3A0A075B6L6 115 aa5.6□□□□□ -1.51
CFDP1-202ENST00000562602 IGHV1OR15-1A0A075B7D0 117 aa5.6□□□□□ -1.51
CFDP1-202ENST00000562602 A0A0J9YX75 114 aa5.6□□□□□ -1.51
CFDP1-202ENST00000562602 IGIPA6NJ69 53 aa5.6□□□□□ -1.51
CFDP1-202ENST00000562602 F5H697 171 aa5.6□□□□□ -1.51
CFDP1-202ENST00000562602 GNRH2O43555 120 aa5.6□□□□□ -1.51
CFDP1-202ENST00000562602 TRBV12-3P01733 135 aa5.6□□□□□ -1.51
CFDP1-202ENST00000562602 CD7P09564 240 aa5.6□□□□□ -1.51
CFDP1-202ENST00000562602 SCGB1A1P11684 91 aa5.6□□□□□ -1.51
CFDP1-202ENST00000562602 TCTAP57738 103 aa5.6□□□□□ -1.51
CFDP1-202ENST00000562602 BLCAPP62952 87 aa5.6□□□□□ -1.51
CFDP1-202ENST00000562602 SCGB1D4Q6XE38 83 aa5.6□□□□□ -1.51
CFDP1-202ENST00000562602 ZFP2Q6ZN57 461 aa5.6□□□□□ -1.51
CFDP1-202ENST00000562602 PTH2Q96A98 100 aa5.6□□□□□ -1.51
CFDP1-202ENST00000562602 C9orf85Q96MD7 179 aa5.6□□□□□ -1.51
CFDP1-202ENST00000562602 PRADC1Q9BSG0 188 aa5.6□□□□□ -1.51
CFDP1-202ENST00000562602 KLK15Q9H2R5 256 aa5.6□□□□□ -1.51
CFDP1-202ENST00000562602 EDA2RQ9HAV5 297 aa5.6□□□□□ -1.51
CFDP1-202ENST00000562602 SPANXB1Q9NS25 103 aaPredicted RBP5.6□□□□□ -1.51
CFDP1-202ENST00000562602 UTP20O75691 2785 aaKnown RBP5.6□□□□□ -1.51
CFDP1-202ENST00000562602 ARHGAP32A7KAX9 2087 aa5.59□□□□□ -1.51
CFDP1-202ENST00000562602 TRBV20-1A0A075B6N2 111 aa5.59□□□□□ -1.51
CFDP1-202ENST00000562602 IGHV4-30-2A0A087WSY4 118 aa5.59□□□□□ -1.51
CFDP1-202ENST00000562602 IGHV3-16A0A0C4DH30 117 aa5.59□□□□□ -1.51
CFDP1-202ENST00000562602 ZNF815PA8K554 130 aa5.59□□□□□ -1.51
CFDP1-202ENST00000562602 J3KRW8 73 aa5.59□□□□□ -1.51
CFDP1-202ENST00000562602 J3QKU1 62 aa5.59□□□□□ -1.51
CFDP1-202ENST00000562602 K7EQG2 157 aa5.59□□□□□ -1.51
CFDP1-202ENST00000562602 LGALS1P09382 135 aaKnown RBP5.59□□□□□ -1.51
CFDP1-202ENST00000562602 LINC00315P59091 139 aa5.59□□□□□ -1.51
CFDP1-202ENST00000562602 SRSF9Q13242 221 aaKnown RBP eCLIP5.59□□□□□ -1.51
CFDP1-202ENST00000562602 NSUN5P1Q3KNT7 163 aa5.59□□□□□ -1.51
CFDP1-202ENST00000562602 GAGE13Q4V321 117 aa5.59□□□□□ -1.51
CFDP1-202ENST00000562602 SUMO4Q6EEV6 95 aa5.59□□□□□ -1.51
CFDP1-202ENST00000562602 TEX29Q8N6K0 151 aa5.59□□□□□ -1.51
CFDP1-202ENST00000562602 MAPKAPK5-AS1Q8N8E1 139 aa5.59□□□□□ -1.51
CFDP1-202ENST00000562602 RPL39LQ96EH5 51 aaKnown RBP5.59□□□□□ -1.51
CFDP1-202ENST00000562602 TP53TG1Q9Y2A0 90 aa5.59□□□□□ -1.51
CFDP1-202ENST00000562602 ZNF256Q9Y2P7 627 aaPredicted RBP5.59□□□□□ -1.51
CFDP1-202ENST00000562602 WNK2Q9Y3S1 2297 aa5.59□□□□□ -1.51
CFDP1-202ENST00000562602 FLNCQ14315 2725 aa5.59□□□□□ -1.52
CFDP1-202ENST00000562602 SDHAF1A6NFY7 115 aa5.58□□□□□ -1.52
CFDP1-202ENST00000562602 KRTAP10-2P60368 255 aa5.58□□□□□ -1.52
CFDP1-202ENST00000562602 ZNF876PQ49A33 203 aa5.58□□□□□ -1.52
CFDP1-202ENST00000562602 NFE4Q86UQ8 179 aa5.58□□□□□ -1.52
CFDP1-202ENST00000562602 ATP6V0E2Q8NHE4 81 aa5.58□□□□□ -1.52
CFDP1-202ENST00000562602 PLEKHB2Q96CS7 222 aa5.58□□□□□ -1.52
CFDP1-202ENST00000562602 UBE2E2Q96LR5 201 aa5.58□□□□□ -1.52
CFDP1-202ENST00000562602 MDFICQ9P1T7 246 aa5.58□□□□□ -1.52
CFDP1-202ENST00000562602 MYO18BQ8IUG5 2567 aa5.57□□□□□ -1.52
CFDP1-202ENST00000562602 TRAV12-3A0A0B4J271 114 aa5.57□□□□□ -1.52
CFDP1-202ENST00000562602 F6UB75 175 aa5.57□□□□□ -1.52
CFDP1-202ENST00000562602 I3L3M4 83 aa5.57□□□□□ -1.52
CFDP1-202ENST00000562602 COX6B1P14854 86 aa5.57□□□□□ -1.52
CFDP1-202ENST00000562602 RPL24P83731 157 aaKnown RBP5.57□□□□□ -1.52
CFDP1-202ENST00000562602 Q6ZQT7 251 aa5.57□□□□□ -1.52
CFDP1-202ENST00000562602 DLX4Q92988 240 aaPredicted RBP5.57□□□□□ -1.52
CFDP1-202ENST00000562602 VPREB3Q9UKI3 123 aa5.57□□□□□ -1.52
CFDP1-202ENST00000562602 PYGO1Q9Y3Y4 419 aa5.57□□□□□ -1.52
CFDP1-202ENST00000562602 MAST4O15021 2626 aa5.56□□□□□ -1.52
CFDP1-202ENST00000562602 ADGRG4Q8IZF6 3080 aa5.56□□□□□ -1.52
CFDP1-202ENST00000562602 CYSRT1A8MQ03 144 aa5.56□□□□□ -1.52
CFDP1-202ENST00000562602 A8MWV9 139 aa5.56□□□□□ -1.52
CFDP1-202ENST00000562602 M0QY20 66 aa5.56□□□□□ -1.52
CFDP1-202ENST00000562602 LEPROTO15243 131 aa5.56□□□□□ -1.52
CFDP1-202ENST00000562602 LGALS3P17931 250 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms