RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 A0A1W2PRE2 83 aa6.15□□□□□ -1.42
HERC1-210ENST00000560897 PRAC2D3DTV9 90 aa6.15□□□□□ -1.42
HERC1-210ENST00000560897 RNASE4P34096 147 aaKnown RBP6.15□□□□□ -1.42
HERC1-210ENST00000560897 TAGLN2P37802 199 aaKnown RBP6.15□□□□□ -1.42
HERC1-210ENST00000560897 BTN1A1Q13410 526 aa6.15□□□□□ -1.42
HERC1-210ENST00000560897 TMEM78Q5T7P6 136 aa6.15□□□□□ -1.42
HERC1-210ENST00000560897 EXOC3-AS1Q8N2X6 119 aa6.15□□□□□ -1.42
HERC1-210ENST00000560897 FXYD5Q96DB9 178 aa6.15□□□□□ -1.42
HERC1-210ENST00000560897 GNG13Q9P2W3 67 aa6.15□□□□□ -1.42
HERC1-210ENST00000560897 MRPS12O15235 138 aaKnown RBP6.14□□□□□ -1.43
HERC1-210ENST00000560897 MRPL53Q96EL3 112 aaKnown RBP6.14□□□□□ -1.43
HERC1-210ENST00000560897 NDFIP1Q9BT67 221 aa6.14□□□□□ -1.43
HERC1-210ENST00000560897 C1orf43Q9BWL3 253 aa6.14□□□□□ -1.43
HERC1-210ENST00000560897 EIF5A2Q9GZV4 153 aaKnown RBP6.14□□□□□ -1.43
HERC1-210ENST00000560897 MANBALQ9NQG1 85 aa6.14□□□□□ -1.43
HERC1-210ENST00000560897 TP53TG3Q9ULZ0 132 aa6.14□□□□□ -1.43
HERC1-210ENST00000560897 IGHV1OR15-1A0A075B7D0 117 aa6.13□□□□□ -1.43
HERC1-210ENST00000560897 TRAV1-1A0A0B4J248 108 aa6.13□□□□□ -1.43
HERC1-210ENST00000560897 TRAV4A0A0B4J268 109 aa6.13□□□□□ -1.43
HERC1-210ENST00000560897 A0A0J9YXV3 536 aa6.13□□□□□ -1.43
HERC1-210ENST00000560897 LOC100996750A0A140TA64 210 aa6.13□□□□□ -1.43
HERC1-210ENST00000560897 SERTM2A0A1B0GWG4 89 aa6.13□□□□□ -1.43
HERC1-210ENST00000560897 PAGE4O60829 102 aa6.13□□□□□ -1.43
HERC1-210ENST00000560897 GPX1P07203 203 aa6.13□□□□□ -1.43
HERC1-210ENST00000560897 UBE2G1P62253 170 aa6.13□□□□□ -1.43
HERC1-210ENST00000560897 ZNF726P1Q15940 193 aa6.13□□□□□ -1.43
HERC1-210ENST00000560897 C5orf17Q8NAS9 161 aa6.13□□□□□ -1.43
HERC1-210ENST00000560897 OR4C5Q8NGB2 326 aa6.13□□□□□ -1.43
HERC1-210ENST00000560897 ZC2HC1AQ96GY0 325 aa6.13□□□□□ -1.43
HERC1-210ENST00000560897 LINC00477Q96M19 166 aa6.13□□□□□ -1.43
HERC1-210ENST00000560897 KRTAP4-6Q9BYQ5 205 aa6.13□□□□□ -1.43
HERC1-210ENST00000560897 KLLNB2CW77 178 aa6.12□□□□□ -1.43
HERC1-210ENST00000560897 KRBOX1C9JBD0 128 aa6.12□□□□□ -1.43
HERC1-210ENST00000560897 SLC17A3O00476 420 aa6.12□□□□□ -1.43
HERC1-210ENST00000560897 WDR73Q6P4I2 378 aa6.12□□□□□ -1.43
HERC1-210ENST00000560897 REG3GQ6UW15 175 aa6.12□□□□□ -1.43
HERC1-210ENST00000560897 HIST1H2BAQ96A08 127 aa6.12□□□□□ -1.43
HERC1-210ENST00000560897 DPH3Q96FX2 82 aa6.12□□□□□ -1.43
HERC1-210ENST00000560897 TCEAL7Q9BRU2 100 aa6.12□□□□□ -1.43
HERC1-210ENST00000560897 PRADC1Q9BSG0 188 aa6.12□□□□□ -1.43
HERC1-210ENST00000560897 EPDR1Q9UM22 224 aa6.12□□□□□ -1.43
HERC1-210ENST00000560897 URGCP-MRPS24S4R325 110 aa6.12□□□□□ -1.43
HERC1-210ENST00000560897 LOC105371267A0A1B0GV96 52 aa6.11□□□□□ -1.43
HERC1-210ENST00000560897 FBLL1A6NHQ2 334 aaKnown RBP6.11□□□□□ -1.43
HERC1-210ENST00000560897 FAM74A7A6NL05 159 aa6.11□□□□□ -1.43
HERC1-210ENST00000560897 DIRC3C9JPN6 131 aa6.11□□□□□ -1.43
HERC1-210ENST00000560897 M0R3E3 92 aa6.11□□□□□ -1.43
HERC1-210ENST00000560897 PDE6DO43924 150 aa6.11□□□□□ -1.43
HERC1-210ENST00000560897 NDUFB4O95168 129 aa6.11□□□□□ -1.43
HERC1-210ENST00000560897 S100A9P06702 114 aaKnown RBP6.11□□□□□ -1.43
HERC1-210ENST00000560897 CEBPGP53567 150 aa6.11□□□□□ -1.43
HERC1-210ENST00000560897 PEA15Q15121 130 aa6.11□□□□□ -1.43
HERC1-210ENST00000560897 ZNF674Q2M3X9 581 aa6.11□□□□□ -1.43
HERC1-210ENST00000560897 GOLT1AQ6ZVE7 132 aa6.11□□□□□ -1.43
HERC1-210ENST00000560897 DAZ4Q86SG3 579 aaKnown RBP6.11□□□□□ -1.43
HERC1-210ENST00000560897 COMMD7Q86VX2 200 aa6.11□□□□□ -1.43
HERC1-210ENST00000560897 C7orf33Q8WU49 177 aa6.11□□□□□ -1.43
HERC1-210ENST00000560897 GTSF1LQ9H1H1 148 aa6.11□□□□□ -1.43
HERC1-210ENST00000560897 DAZ3Q9NR90 486 aaKnown RBP6.11□□□□□ -1.43
HERC1-210ENST00000560897 VAX2Q9UIW0 290 aa6.11□□□□□ -1.43
HERC1-210ENST00000560897 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.11□□□□□ -1.43
HERC1-210ENST00000560897 ARL2-SNX15V9GYD0 113 aa6.11□□□□□ -1.43
HERC1-210ENST00000560897 RBAKDNA6NC62 111 aa6.1□□□□□ -1.43
HERC1-210ENST00000560897 TCRAP04437 139 aa6.1□□□□□ -1.43
HERC1-210ENST00000560897 AKR1C3P42330 323 aa6.1□□□□□ -1.43
HERC1-210ENST00000560897 ZNF138P52744 262 aa6.1□□□□□ -1.43
HERC1-210ENST00000560897 CCL20P78556 96 aa6.1□□□□□ -1.43
HERC1-210ENST00000560897 SAPCD1Q5SSQ6 148 aa6.1□□□□□ -1.43
HERC1-210ENST00000560897 PET117Q6UWS5 81 aa6.1□□□□□ -1.43
HERC1-210ENST00000560897 PRNTQ86SH4 94 aa6.1□□□□□ -1.43
HERC1-210ENST00000560897 Q8N3U1 123 aa6.1□□□□□ -1.43
HERC1-210ENST00000560897 CYB561D1Q8N8Q1 229 aa6.1□□□□□ -1.43
HERC1-210ENST00000560897 RASL10AQ92737 203 aa6.1□□□□□ -1.43
HERC1-210ENST00000560897 SPXQ9BT56 116 aa6.1□□□□□ -1.43
HERC1-210ENST00000560897 A0A087WWL8 130 aa6.09□□□□□ -1.43
HERC1-210ENST00000560897 IGHV3-16A0A0C4DH30 117 aa6.09□□□□□ -1.43
HERC1-210ENST00000560897 PEX7O00628 323 aa6.09□□□□□ -1.43
HERC1-210ENST00000560897 BCL2P10415 239 aa6.09□□□□□ -1.43
HERC1-210ENST00000560897 GATA1P15976 413 aaPredicted RBP6.09□□□□□ -1.43
HERC1-210ENST00000560897 MEF2BQ02080 365 aaPredicted RBP6.09□□□□□ -1.43
HERC1-210ENST00000560897 ERCC8Q13216 396 aa6.09□□□□□ -1.43
HERC1-210ENST00000560897 RHOHQ15669 191 aa6.09□□□□□ -1.43
HERC1-210ENST00000560897 TREM1Q9NP99 234 aa6.09□□□□□ -1.43
HERC1-210ENST00000560897 TRGV11A0A075B6L2 103 aa6.08□□□□□ -1.44
HERC1-210ENST00000560897 IGKV2-40A0A087WW87 121 aaPredicted RBP6.08□□□□□ -1.44
HERC1-210ENST00000560897 IGKV2D-40P01614 121 aaPredicted RBP6.08□□□□□ -1.44
HERC1-210ENST00000560897 NMBP08949 121 aa6.08□□□□□ -1.44
HERC1-210ENST00000560897 KRTAP10-8P60410 259 aa6.08□□□□□ -1.44
HERC1-210ENST00000560897 GNG5P63218 68 aa6.08□□□□□ -1.44
HERC1-210ENST00000560897 FLI1Q01543 452 aaPredicted RBP6.08□□□□□ -1.44
HERC1-210ENST00000560897 KCNIP4Q6PIL6 250 aa6.08□□□□□ -1.44
HERC1-210ENST00000560897 UBE2WQ96B02 151 aa6.08□□□□□ -1.44
HERC1-210ENST00000560897 FMC1Q96HJ9 113 aa6.08□□□□□ -1.44
HERC1-210ENST00000560897 SGK494Q96LW2 274 aa6.08□□□□□ -1.44
HERC1-210ENST00000560897 AGPAT4-IT1Q9H0P7 198 aa6.08□□□□□ -1.44
HERC1-210ENST00000560897 PSG8Q9UQ74 426 aa6.08□□□□□ -1.44
HERC1-210ENST00000560897 KIF25-AS1Q9Y6Z4 181 aa6.08□□□□□ -1.44
HERC1-210ENST00000560897 H3BS24 57 aa6.07□□□□□ -1.44
HERC1-210ENST00000560897 PHOX2AO14813 284 aa6.07□□□□□ -1.44
HERC1-210ENST00000560897 CRISP2P16562 243 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms