RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 MRPL23Q16540 153 aaKnown RBP6.56□□□□□ -1.36
CCDC33-209ENST00000560565 ZFAND6Q6FIF0 208 aa6.56□□□□□ -1.36
CCDC33-209ENST00000560565 TEX29Q8N6K0 151 aa6.56□□□□□ -1.36
CCDC33-209ENST00000560565 FAM110DQ8TAY7 271 aaPredicted RBP6.56□□□□□ -1.36
CCDC33-209ENST00000560565 EEF1AKMT3Q96AZ1 226 aa6.56□□□□□ -1.36
CCDC33-209ENST00000560565 PRO0461Q9UI25 63 aa6.56□□□□□ -1.36
CCDC33-209ENST00000560565 UFC1Q9Y3C8 167 aa6.56□□□□□ -1.36
CCDC33-209ENST00000560565 MEGF8Q7Z7M0 2845 aa6.55□□□□□ -1.36
CCDC33-209ENST00000560565 ZNF688P0C7X2 276 aa6.55□□□□□ -1.36
CCDC33-209ENST00000560565 SRD5A1P18405 259 aa6.55□□□□□ -1.36
CCDC33-209ENST00000560565 COX7A1P24310 79 aa6.55□□□□□ -1.36
CCDC33-209ENST00000560565 CNTFRP26992 372 aa6.55□□□□□ -1.36
CCDC33-209ENST00000560565 UBE2D1P51668 147 aa6.55□□□□□ -1.36
CCDC33-209ENST00000560565 UBE2D3P61077 147 aa6.55□□□□□ -1.36
CCDC33-209ENST00000560565 UBE2D2P62837 147 aa6.55□□□□□ -1.36
CCDC33-209ENST00000560565 EBI3Q14213 229 aa6.55□□□□□ -1.36
CCDC33-209ENST00000560565 HES1Q14469 280 aa6.55□□□□□ -1.36
CCDC33-209ENST00000560565 Q6Q795 121 aa6.55□□□□□ -1.36
CCDC33-209ENST00000560565 VMO1Q7Z5L0 202 aa6.55□□□□□ -1.36
CCDC33-209ENST00000560565 NRACQ8N912 160 aa6.55□□□□□ -1.36
CCDC33-209ENST00000560565 SYT8Q8NBV8 401 aa6.55□□□□□ -1.36
CCDC33-209ENST00000560565 NEXN-AS1Q8NBZ9 246 aa6.55□□□□□ -1.36
CCDC33-209ENST00000560565 ERG28Q9UKR5 140 aa6.55□□□□□ -1.36
CCDC33-209ENST00000560565 J3QLI3 93 aa6.54□□□□□ -1.36
CCDC33-209ENST00000560565 APELAP0DMC3 54 aa6.54□□□□□ -1.36
CCDC33-209ENST00000560565 S100A4P26447 101 aaKnown RBP6.54□□□□□ -1.36
CCDC33-209ENST00000560565 ERCC8Q13216 396 aa6.54□□□□□ -1.36
CCDC33-209ENST00000560565 SBSPONQ8IVN8 264 aa6.54□□□□□ -1.36
CCDC33-209ENST00000560565 OR10J6PQ8NGY7 276 aa6.54□□□□□ -1.36
CCDC33-209ENST00000560565 FANCD2OSQ96PS1 177 aa6.54□□□□□ -1.36
CCDC33-209ENST00000560565 TIMM17AQ99595 171 aa6.54□□□□□ -1.36
CCDC33-209ENST00000560565 KIR2DL4Q99706 377 aa6.54□□□□□ -1.36
CCDC33-209ENST00000560565 LOC107984156A0A0G2JMH3 177 aa6.53□□□□□ -1.36
CCDC33-209ENST00000560565 C11orf86A6NJI1 115 aa6.53□□□□□ -1.36
CCDC33-209ENST00000560565 BUB3O43684 328 aa6.53□□□□□ -1.36
CCDC33-209ENST00000560565 SNCGO76070 127 aa6.53□□□□□ -1.36
CCDC33-209ENST00000560565 CTSGP08311 255 aa6.53□□□□□ -1.36
CCDC33-209ENST00000560565 LGALS1P09382 135 aaKnown RBP6.53□□□□□ -1.36
CCDC33-209ENST00000560565 P0DMU3 169 aa6.53□□□□□ -1.36
CCDC33-209ENST00000560565 FAM231AP0DMU4 169 aa6.53□□□□□ -1.36
CCDC33-209ENST00000560565 FAM231CP0DMU5 169 aa6.53□□□□□ -1.36
CCDC33-209ENST00000560565 PSMB2P49721 201 aa6.53□□□□□ -1.36
CCDC33-209ENST00000560565 ZNF80P51504 273 aaPredicted RBP6.53□□□□□ -1.36
CCDC33-209ENST00000560565 GAGE5Q13069 117 aa6.53□□□□□ -1.36
CCDC33-209ENST00000560565 GAGE6Q13070 117 aa6.53□□□□□ -1.36
CCDC33-209ENST00000560565 RUSC1-AS1Q66K80 236 aa6.53□□□□□ -1.36
CCDC33-209ENST00000560565 Q6ZUT4 128 aa6.53□□□□□ -1.36
CCDC33-209ENST00000560565 ARL17AQ8IVW1 177 aa6.53□□□□□ -1.36
CCDC33-209ENST00000560565 C10orf126Q8N4M7 172 aa6.53□□□□□ -1.36
CCDC33-209ENST00000560565 CFHR4Q92496 578 aa6.53□□□□□ -1.36
CCDC33-209ENST00000560565 LINC01600Q96MT4 127 aa6.53□□□□□ -1.36
CCDC33-209ENST00000560565 ANAPC13Q9BS18 74 aa6.53□□□□□ -1.36
CCDC33-209ENST00000560565 PRADC1Q9BSG0 188 aa6.53□□□□□ -1.36
CCDC33-209ENST00000560565 TENM1Q9UKZ4 2725 aa6.52□□□□□ -1.37
CCDC33-209ENST00000560565 A0A0B4J2C4 111 aa6.52□□□□□ -1.37
CCDC33-209ENST00000560565 FAM223BA6NKX1 122 aa6.52□□□□□ -1.37
CCDC33-209ENST00000560565 VCYO14598 125 aa6.52□□□□□ -1.37
CCDC33-209ENST00000560565 TSPAN13O95857 204 aa6.52□□□□□ -1.37
CCDC33-209ENST00000560565 COX6CP09669 75 aa6.52□□□□□ -1.37
CCDC33-209ENST00000560565 LGALS3P17931 250 aaKnown RBP6.52□□□□□ -1.37
CCDC33-209ENST00000560565 PMVKQ15126 192 aa6.52□□□□□ -1.37
CCDC33-209ENST00000560565 ATXN8Q156A1 80 aa6.52□□□□□ -1.37
CCDC33-209ENST00000560565 PRR31Q5SQ13 230 aa6.52□□□□□ -1.37
CCDC33-209ENST00000560565 C2orf66Q6UXQ4 117 aa6.52□□□□□ -1.37
CCDC33-209ENST00000560565 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.52□□□□□ -1.37
CCDC33-209ENST00000560565 SH2D6Q7Z4S9 175 aa6.52□□□□□ -1.37
CCDC33-209ENST00000560565 WFDC3Q8IUB2 231 aa6.52□□□□□ -1.37
CCDC33-209ENST00000560565 FAM223AQ8IWN6 122 aa6.52□□□□□ -1.37
CCDC33-209ENST00000560565 DYNAPQ8N1N2 210 aa6.52□□□□□ -1.37
CCDC33-209ENST00000560565 POM121L12Q8N7R1 296 aa6.52□□□□□ -1.37
CCDC33-209ENST00000560565 Q8TAT8 98 aa6.52□□□□□ -1.37
CCDC33-209ENST00000560565 COPS9Q8WXC6 57 aa6.52□□□□□ -1.37
CCDC33-209ENST00000560565 PRO1854Q9UHT4 67 aa6.52□□□□□ -1.37
CCDC33-209ENST00000560565 PHLDA3Q9Y5J5 127 aa6.52□□□□□ -1.37
CCDC33-209ENST00000560565 ANK2Q01484 3957 aa6.51□□□□□ -1.37
CCDC33-209ENST00000560565 IGKV3D-20A0A0C4DH25 116 aa6.51□□□□□ -1.37
CCDC33-209ENST00000560565 IGHV7-4-1A0A0J9YVY3 117 aa6.51□□□□□ -1.37
CCDC33-209ENST00000560565 NPFFO15130 113 aa6.51□□□□□ -1.37
CCDC33-209ENST00000560565 IGHV1-69P01742 117 aa6.51□□□□□ -1.37
CCDC33-209ENST00000560565 ARL3P36405 182 aa6.51□□□□□ -1.37
CCDC33-209ENST00000560565 FXYD7P58549 80 aa6.51□□□□□ -1.37
CCDC33-209ENST00000560565 MORN3Q6PF18 240 aaPredicted RBP6.51□□□□□ -1.37
CCDC33-209ENST00000560565 NDUFA11Q86Y39 141 aa6.51□□□□□ -1.37
CCDC33-209ENST00000560565 MAPKAPK5-AS1Q8N8E1 139 aa6.51□□□□□ -1.37
CCDC33-209ENST00000560565 BAALCQ8WXS3 180 aa6.51□□□□□ -1.37
CCDC33-209ENST00000560565 PLEKHB2Q96CS7 222 aa6.51□□□□□ -1.37
CCDC33-209ENST00000560565 AGPAT4-IT1Q9H0P7 198 aa6.51□□□□□ -1.37
CCDC33-209ENST00000560565 IGHV4OR15-8A0A075B7B6 117 aa6.5□□□□□ -1.37
CCDC33-209ENST00000560565 A0A087WW49 117 aa6.5□□□□□ -1.37
CCDC33-209ENST00000560565 A0A0J9YX75 114 aa6.5□□□□□ -1.37
CCDC33-209ENST00000560565 AVPP01185 164 aa6.5□□□□□ -1.37
CCDC33-209ENST00000560565 GAGE2BQ13066 116 aa6.5□□□□□ -1.37
CCDC33-209ENST00000560565 FOXE3Q13461 319 aa6.5□□□□□ -1.37
CCDC33-209ENST00000560565 RHOHQ15669 191 aa6.5□□□□□ -1.37
CCDC33-209ENST00000560565 GAGE2EQ4V326 116 aa6.5□□□□□ -1.37
CCDC33-209ENST00000560565 Q8N6K4 173 aa6.5□□□□□ -1.37
CCDC33-209ENST00000560565 SLC25A29Q8N8R3 303 aa6.5□□□□□ -1.37
CCDC33-209ENST00000560565 C16orf92Q96LL3 132 aa6.5□□□□□ -1.37
CCDC33-209ENST00000560565 MSRB1Q9NZV6 116 aa6.5□□□□□ -1.37
CCDC33-209ENST00000560565 GAGE2DQ9UEU5 116 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms