RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 ACOT6Q3I5F7 207 aaPredicted RBP6.84□□□□□ -1.31
SNRPA1-212ENST00000560496 C4orf48Q5BLP8 95 aa6.84□□□□□ -1.31
SNRPA1-212ENST00000560496 COA6Q5JTJ3 125 aaKnown RBP6.84□□□□□ -1.31
SNRPA1-212ENST00000560496 HIST3H2BBQ8N257 126 aa6.84□□□□□ -1.31
SNRPA1-212ENST00000560496 OR10D4PQ8NGN7 298 aa6.84□□□□□ -1.31
SNRPA1-212ENST00000560496 CMTM2Q8TAZ6 248 aa6.84□□□□□ -1.31
SNRPA1-212ENST00000560496 YPEL4Q96NS1 127 aa6.84□□□□□ -1.31
SNRPA1-212ENST00000560496 TXNDC17Q9BRA2 123 aa6.84□□□□□ -1.31
SNRPA1-212ENST00000560496 PGPEP1Q9NXJ5 209 aa6.84□□□□□ -1.31
SNRPA1-212ENST00000560496 MSRB1Q9NZV6 116 aa6.84□□□□□ -1.31
SNRPA1-212ENST00000560496 C11orf21Q9P2W6 132 aa6.84□□□□□ -1.31
SNRPA1-212ENST00000560496 K7EP13 123 aa6.83□□□□□ -1.32
SNRPA1-212ENST00000560496 PCP4P48539 62 aa6.83□□□□□ -1.32
SNRPA1-212ENST00000560496 CDC34P49427 236 aaPredicted RBP6.83□□□□□ -1.32
SNRPA1-212ENST00000560496 ZNF80P51504 273 aaPredicted RBP6.83□□□□□ -1.32
SNRPA1-212ENST00000560496 NDUFA6P56556 154 aa6.83□□□□□ -1.32
SNRPA1-212ENST00000560496 TIRAPP58753 221 aa6.83□□□□□ -1.32
SNRPA1-212ENST00000560496 ZNF674Q2M3X9 581 aa6.83□□□□□ -1.32
SNRPA1-212ENST00000560496 OR4C5Q8NGB2 326 aa6.83□□□□□ -1.32
SNRPA1-212ENST00000560496 OR2G3Q8NGZ4 309 aa6.83□□□□□ -1.32
SNRPA1-212ENST00000560496 SCGB1C1Q8TD33 95 aa6.83□□□□□ -1.32
SNRPA1-212ENST00000560496 PACRGQ96M98 296 aaPredicted RBP6.83□□□□□ -1.32
SNRPA1-212ENST00000560496 EIF5A2Q9GZV4 153 aaKnown RBP6.83□□□□□ -1.32
SNRPA1-212ENST00000560496 VAX2Q9UIW0 290 aa6.83□□□□□ -1.32
SNRPA1-212ENST00000560496 TRBV24-1A0A075B6N3 115 aa6.82□□□□□ -1.32
SNRPA1-212ENST00000560496 LRCOL1A6NCL2 159 aa6.82□□□□□ -1.32
SNRPA1-212ENST00000560496 EPM2AB3EWF7 344 aa6.82□□□□□ -1.32
SNRPA1-212ENST00000560496 GGTLC3B5MD39 225 aa6.82□□□□□ -1.32
SNRPA1-212ENST00000560496 EREGO14944 169 aa6.82□□□□□ -1.32
SNRPA1-212ENST00000560496 CRYGDP07320 174 aa6.82□□□□□ -1.32
SNRPA1-212ENST00000560496 STAG3L2P0CL84 134 aa6.82□□□□□ -1.32
SNRPA1-212ENST00000560496 STAG3L3P0CL85 134 aa6.82□□□□□ -1.32
SNRPA1-212ENST00000560496 EVI2AP22794 236 aa6.82□□□□□ -1.32
SNRPA1-212ENST00000560496 TAGLN2P37802 199 aaKnown RBP6.82□□□□□ -1.32
SNRPA1-212ENST00000560496 TMEM75Q8N9X5 138 aa6.82□□□□□ -1.32
SNRPA1-212ENST00000560496 OR10G9Q8NGN4 311 aa6.82□□□□□ -1.32
SNRPA1-212ENST00000560496 OR10G7Q8NGN6 311 aa6.82□□□□□ -1.32
SNRPA1-212ENST00000560496 SGK494Q96LW2 274 aa6.82□□□□□ -1.32
SNRPA1-212ENST00000560496 C9orf85Q96MD7 179 aa6.82□□□□□ -1.32
SNRPA1-212ENST00000560496 SDF2L1Q9HCN8 221 aa6.82□□□□□ -1.32
SNRPA1-212ENST00000560496 TRAV9-2A0A087WT02 112 aa6.81□□□□□ -1.32
SNRPA1-212ENST00000560496 SERTM2A0A1B0GWG4 89 aa6.81□□□□□ -1.32
SNRPA1-212ENST00000560496 A0A1W2PPV4 95 aa6.81□□□□□ -1.32
SNRPA1-212ENST00000560496 FBLL1A6NHQ2 334 aaKnown RBP6.81□□□□□ -1.32
SNRPA1-212ENST00000560496 DLEU1O43261 78 aa6.81□□□□□ -1.32
SNRPA1-212ENST00000560496 IGLV2-11P01706 119 aa6.81□□□□□ -1.32
SNRPA1-212ENST00000560496 TCRAP04437 139 aa6.81□□□□□ -1.32
SNRPA1-212ENST00000560496 SRSF3P84103 164 aaKnown RBP6.81□□□□□ -1.32
SNRPA1-212ENST00000560496 LINC01556Q5JQF7 62 aa6.81□□□□□ -1.32
SNRPA1-212ENST00000560496 Q5VSD8 79 aa6.81□□□□□ -1.32
SNRPA1-212ENST00000560496 CFAP126Q5VTH2 177 aa6.81□□□□□ -1.32
SNRPA1-212ENST00000560496 C10orf126Q8N4M7 172 aa6.81□□□□□ -1.32
SNRPA1-212ENST00000560496 SLC25A29Q8N8R3 303 aa6.81□□□□□ -1.32
SNRPA1-212ENST00000560496 C5orf17Q8NAS9 161 aa6.81□□□□□ -1.32
SNRPA1-212ENST00000560496 TMEM18Q96B42 140 aa6.81□□□□□ -1.32
SNRPA1-212ENST00000560496 KCNS1Q96KK3 526 aa6.81□□□□□ -1.32
SNRPA1-212ENST00000560496 SRRM2Q9UQ35 2752 aaKnown RBP6.81□□□□□ -1.32
SNRPA1-212ENST00000560496 IGHV3-38A0A0C4DH36 116 aa6.8□□□□□ -1.32
SNRPA1-212ENST00000560496 RS1O15537 224 aa6.8□□□□□ -1.32
SNRPA1-212ENST00000560496 HIST1H2BKO60814 126 aa6.8□□□□□ -1.32
SNRPA1-212ENST00000560496 HIST1H2BJP06899 126 aa6.8□□□□□ -1.32
SNRPA1-212ENST00000560496 RNASE3P12724 160 aaKnown RBP6.8□□□□□ -1.32
SNRPA1-212ENST00000560496 HIST1H2BOP23527 126 aa6.8□□□□□ -1.32
SNRPA1-212ENST00000560496 ATP6V0CP27449 155 aa6.8□□□□□ -1.32
SNRPA1-212ENST00000560496 GCHFRP30047 84 aa6.8□□□□□ -1.32
SNRPA1-212ENST00000560496 HIST1H2BBP33778 126 aa6.8□□□□□ -1.32
SNRPA1-212ENST00000560496 HIST1H2BDP58876 126 aa6.8□□□□□ -1.32
SNRPA1-212ENST00000560496 HIST1H2BCP62807 126 aa6.8□□□□□ -1.32
SNRPA1-212ENST00000560496 HAMPP81172 84 aa6.8□□□□□ -1.32
SNRPA1-212ENST00000560496 RHOHQ15669 191 aa6.8□□□□□ -1.32
SNRPA1-212ENST00000560496 HIST2H2BEQ16778 126 aa6.8□□□□□ -1.32
SNRPA1-212ENST00000560496 TMEM241Q24JQ0 296 aa6.8□□□□□ -1.32
SNRPA1-212ENST00000560496 ZNF506Q5JVG8 444 aa6.8□□□□□ -1.32
SNRPA1-212ENST00000560496 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.8□□□□□ -1.32
SNRPA1-212ENST00000560496 SH2D6Q7Z4S9 175 aa6.8□□□□□ -1.32
SNRPA1-212ENST00000560496 NHLRC2Q8NBF2 726 aa6.8□□□□□ -1.32
SNRPA1-212ENST00000560496 HIST1H2BHQ93079 126 aa6.8□□□□□ -1.32
SNRPA1-212ENST00000560496 HIST1H2BNQ99877 126 aa6.8□□□□□ -1.32
SNRPA1-212ENST00000560496 HIST1H2BMQ99879 126 aa6.8□□□□□ -1.32
SNRPA1-212ENST00000560496 PSMG3Q9BT73 122 aaPredicted RBP6.8□□□□□ -1.32
SNRPA1-212ENST00000560496 SH3BGRL3Q9H299 93 aa6.8□□□□□ -1.32
SNRPA1-212ENST00000560496 TRBV6-4A0A1B0GX49 114 aa6.79□□□□□ -1.32
SNRPA1-212ENST00000560496 PFN1P07737 140 aaKnown RBP6.79□□□□□ -1.32
SNRPA1-212ENST00000560496 LINC00694P0DN24 101 aa6.79□□□□□ -1.32
SNRPA1-212ENST00000560496 ELOBQ15370 118 aa6.79□□□□□ -1.32
SNRPA1-212ENST00000560496 ZNF876PQ49A33 203 aa6.79□□□□□ -1.32
SNRPA1-212ENST00000560496 OR2D3Q8NGH3 330 aa6.79□□□□□ -1.32
SNRPA1-212ENST00000560496 NDFIP1Q9BT67 221 aa6.79□□□□□ -1.32
SNRPA1-212ENST00000560496 PSG8Q9UQ74 426 aa6.79□□□□□ -1.32
SNRPA1-212ENST00000560496 PKHD1L1Q86WI1 4243 aa6.79□□□□□ -1.32
SNRPA1-212ENST00000560496 IGHV3-73A0A0B4J1V6 119 aa6.78□□□□□ -1.32
SNRPA1-212ENST00000560496 TRAV1-1A0A0B4J248 108 aa6.78□□□□□ -1.32
SNRPA1-212ENST00000560496 PGPEP1LA6NFU8 196 aa6.78□□□□□ -1.32
SNRPA1-212ENST00000560496 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.78□□□□□ -1.32
SNRPA1-212ENST00000560496 IBA57-AS1B1ANH7 110 aa6.78□□□□□ -1.32
SNRPA1-212ENST00000560496 GCSHP23434 173 aa6.78□□□□□ -1.32
SNRPA1-212ENST00000560496 RPL7L1Q6DKI1 246 aaKnown RBP6.78□□□□□ -1.32
SNRPA1-212ENST00000560496 Q8N3U1 123 aa6.78□□□□□ -1.32
SNRPA1-212ENST00000560496 CYB561D1Q8N8Q1 229 aa6.78□□□□□ -1.32
SNRPA1-212ENST00000560496 PTH2Q96A98 100 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms