RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 A0A0J9YX75 114 aa10.49□□□□□ -0.73
CARMIL3-203ENST00000560349 TCTAP57738 103 aa10.49□□□□□ -0.73
CARMIL3-203ENST00000560349 OR9G4Q8NGQ1 327 aa10.49□□□□□ -0.73
CARMIL3-203ENST00000560349 HTN1P15515 57 aa10.49□□□□□ -0.73
CARMIL3-203ENST00000560349 ASIPP42127 132 aa10.49□□□□□ -0.73
CARMIL3-203ENST00000560349 CACNG7P62955 275 aa10.49□□□□□ -0.73
CARMIL3-203ENST00000560349 C14orf178Q8N769 122 aaPredicted RBP10.49□□□□□ -0.73
CARMIL3-203ENST00000560349 DEFB104AQ8WTQ1 72 aa10.49□□□□□ -0.73
CARMIL3-203ENST00000560349 CITED2Q99967 270 aaPredicted RBP10.49□□□□□ -0.73
CARMIL3-203ENST00000560349 PHLDA3Q9Y5J5 127 aa10.49□□□□□ -0.73
CARMIL3-203ENST00000560349 PRM2P04554 102 aa10.48□□□□□ -0.73
CARMIL3-203ENST00000560349 DEFB131AP59861 70 aa10.48□□□□□ -0.73
CARMIL3-203ENST00000560349 LGALS9BQ3B8N2 356 aa10.48□□□□□ -0.73
CARMIL3-203ENST00000560349 LGALS9CQ6DKI2 356 aa10.48□□□□□ -0.73
CARMIL3-203ENST00000560349 RAX2Q96IS3 184 aa10.48□□□□□ -0.73
CARMIL3-203ENST00000560349 TRAV8-6A0A0B4J262 113 aa10.48□□□□□ -0.73
CARMIL3-203ENST00000560349 KLLNB2CW77 178 aa10.48□□□□□ -0.73
CARMIL3-203ENST00000560349 TNFRSF6BO95407 300 aa10.48□□□□□ -0.73
CARMIL3-203ENST00000560349 RNASE3P12724 160 aaKnown RBP10.48□□□□□ -0.73
CARMIL3-203ENST00000560349 TMEM86BQ8N661 226 aa10.48□□□□□ -0.73
CARMIL3-203ENST00000560349 JPT2Q9H910 190 aa10.48□□□□□ -0.73
CARMIL3-203ENST00000560349 HBDP02042 147 aa10.47□□□□□ -0.73
CARMIL3-203ENST00000560349 CD7P09564 240 aa10.47□□□□□ -0.73
CARMIL3-203ENST00000560349 TMEM97Q5BJF2 176 aa10.47□□□□□ -0.73
CARMIL3-203ENST00000560349 SHISA2Q6UWI4 295 aa10.47□□□□□ -0.73
CARMIL3-203ENST00000560349 APRG1Q8IVJ8 170 aa10.47□□□□□ -0.73
CARMIL3-203ENST00000560349 LINC01006Q8NI28 216 aa10.47□□□□□ -0.73
CARMIL3-203ENST00000560349 DYNLRB2Q8TF09 96 aa10.47□□□□□ -0.73
CARMIL3-203ENST00000560349 FAM159AQ6UWV7 190 aa10.46□□□□□ -0.73
CARMIL3-203ENST00000560349 C18orf15Q96N68 181 aa10.46□□□□□ -0.73
CARMIL3-203ENST00000560349 MGPP08493 103 aa10.46□□□□□ -0.74
CARMIL3-203ENST00000560349 BOD1L2Q8IYS8 172 aa10.46□□□□□ -0.74
CARMIL3-203ENST00000560349 IFI27L1Q96BM0 104 aa10.46□□□□□ -0.74
CARMIL3-203ENST00000560349 C7orf71A4D174 169 aa10.45□□□□□ -0.74
CARMIL3-203ENST00000560349 SMAGPQ0VAQ4 97 aa10.45□□□□□ -0.74
CARMIL3-203ENST00000560349 CD300EQ496F6 205 aaPredicted RBP10.45□□□□□ -0.74
CARMIL3-203ENST00000560349 AZU1P20160 251 aa10.45□□□□□ -0.74
CARMIL3-203ENST00000560349 MDFICQ9P1T7 246 aa10.45□□□□□ -0.74
CARMIL3-203ENST00000560349 GTSF1LQ9H1H1 148 aa10.44□□□□□ -0.74
CARMIL3-203ENST00000560349 MAP1LC3AQ9H492 121 aa10.44□□□□□ -0.74
CARMIL3-203ENST00000560349 DKK2Q9UBU2 259 aa10.44□□□□□ -0.74
CARMIL3-203ENST00000560349 TEX29Q8N6K0 151 aa10.44□□□□□ -0.74
CARMIL3-203ENST00000560349 RPL39LQ96EH5 51 aaKnown RBP10.44□□□□□ -0.74
CARMIL3-203ENST00000560349 PEMTQ9UBM1 199 aa10.44□□□□□ -0.74
CARMIL3-203ENST00000560349 ATRQ13535 2644 aa10.44□□□□□ -0.74
CARMIL3-203ENST00000560349 A0A087WWL8 130 aa10.43□□□□□ -0.74
CARMIL3-203ENST00000560349 LY6G6DO95868 133 aa10.43□□□□□ -0.74
CARMIL3-203ENST00000560349 RBMY1A1P0DJD3 496 aaKnown RBP10.43□□□□□ -0.74
CARMIL3-203ENST00000560349 RBMY1CP0DJD4 496 aa10.43□□□□□ -0.74
CARMIL3-203ENST00000560349 RBMY1FQ15415 496 aaKnown RBP10.43□□□□□ -0.74
CARMIL3-203ENST00000560349 OR2K2Q8NGT1 345 aa10.43□□□□□ -0.74
CARMIL3-203ENST00000560349 SEC11AP67812 179 aa10.43□□□□□ -0.74
CARMIL3-203ENST00000560349 PCP2Q8IVA1 136 aa10.43□□□□□ -0.74
CARMIL3-203ENST00000560349 Q8N1Y9 231 aa10.43□□□□□ -0.74
CARMIL3-203ENST00000560349 CCL24O00175 119 aa10.42□□□□□ -0.74
CARMIL3-203ENST00000560349 NRACQ8N912 160 aa10.42□□□□□ -0.74
CARMIL3-203ENST00000560349 ZNF479Q96JC4 524 aa10.42□□□□□ -0.74
CARMIL3-203ENST00000560349 TRRAPQ9Y4A5 3859 aa10.42□□□□□ -0.74
CARMIL3-203ENST00000560349 RBMY1BA6NDE4 496 aaKnown RBP10.42□□□□□ -0.74
CARMIL3-203ENST00000560349 RBMY1EA6NEQ0 496 aaKnown RBP10.42□□□□□ -0.74
CARMIL3-203ENST00000560349 RNASE1P07998 156 aaKnown RBP10.42□□□□□ -0.74
CARMIL3-203ENST00000560349 RBMY1DP0C7P1 496 aaKnown RBP10.42□□□□□ -0.74
CARMIL3-203ENST00000560349 SCGB1A1P11684 91 aa10.42□□□□□ -0.74
CARMIL3-203ENST00000560349 NSUN5P1Q3KNT7 163 aa10.42□□□□□ -0.74
CARMIL3-203ENST00000560349 LEPP41159 167 aa10.41□□□□□ -0.74
CARMIL3-203ENST00000560349 DEFB114Q30KQ6 69 aa10.41□□□□□ -0.74
CARMIL3-203ENST00000560349 FAM74A4Q5TZK3 123 aa10.41□□□□□ -0.74
CARMIL3-203ENST00000560349 AMTNQ6UX39 209 aa10.41□□□□□ -0.74
CARMIL3-203ENST00000560349 NEGR1Q7Z3B1 354 aa10.41□□□□□ -0.74
CARMIL3-203ENST00000560349 IGHV4-4A0A075B6R2 117 aa10.41□□□□□ -0.74
CARMIL3-203ENST00000560349 FOXI2Q6ZQN5 318 aa10.41□□□□□ -0.74
CARMIL3-203ENST00000560349 ZNF418Q8TF45 676 aaPredicted RBP10.41□□□□□ -0.74
CARMIL3-203ENST00000560349 LINC01546A6NGU7 62 aa10.41□□□□□ -0.74
CARMIL3-203ENST00000560349 INAFM1C9JVW0 142 aa10.41□□□□□ -0.74
CARMIL3-203ENST00000560349 NMUP48645 174 aa10.41□□□□□ -0.74
CARMIL3-203ENST00000560349 CKS1BP61024 79 aa10.4□□□□□ -0.74
CARMIL3-203ENST00000560349 MAP6D1Q9H9H5 199 aa10.4□□□□□ -0.74
CARMIL3-203ENST00000560349 TEP1Q99973 2627 aaKnown RBP10.4□□□□□ -0.75
CARMIL3-203ENST00000560349 TRBV7-9A0A0J9YWB2 115 aa10.4□□□□□ -0.75
CARMIL3-203ENST00000560349 JMJD8Q96S16 334 aa10.4□□□□□ -0.75
CARMIL3-203ENST00000560349 NAA38Q9BRA0 125 aaKnown RBP10.4□□□□□ -0.75
CARMIL3-203ENST00000560349 H3BRM9 83 aa10.39□□□□□ -0.75
CARMIL3-203ENST00000560349 SIVA1O15304 175 aa10.39□□□□□ -0.75
CARMIL3-203ENST00000560349 FCER1GP30273 86 aa10.39□□□□□ -0.75
CARMIL3-203ENST00000560349 HILS1P60008 231 aa10.39□□□□□ -0.75
CARMIL3-203ENST00000560349 TMEM158Q8WZ71 300 aa10.39□□□□□ -0.75
CARMIL3-203ENST00000560349 RASL10AQ92737 203 aa10.39□□□□□ -0.75
CARMIL3-203ENST00000560349 DPH3P1Q9H4G8 78 aa10.39□□□□□ -0.75
CARMIL3-203ENST00000560349 C9orf118A6NHY6 69 aa10.39□□□□□ -0.75
CARMIL3-203ENST00000560349 H3BMM0 161 aa10.39□□□□□ -0.75
CARMIL3-203ENST00000560349 HSD52Q0P140 79 aa10.39□□□□□ -0.75
CARMIL3-203ENST00000560349 AP1S3Q96PC3 154 aa10.39□□□□□ -0.75
CARMIL3-203ENST00000560349 IGKV2D-26A0A0A0MRZ7 120 aa10.38□□□□□ -0.75
CARMIL3-203ENST00000560349 IGHV3-16A0A0C4DH30 117 aa10.38□□□□□ -0.75
CARMIL3-203ENST00000560349 ODF1Q14990 250 aa10.38□□□□□ -0.75
CARMIL3-203ENST00000560349 HHLA3Q9XRX5 114 aa10.38□□□□□ -0.75
CARMIL3-203ENST00000560349 NBEAL2Q6ZNJ1 2754 aa10.38□□□□□ -0.75
CARMIL3-203ENST00000560349 IGLV2-18A0A075B6J9 118 aa10.38□□□□□ -0.75
CARMIL3-203ENST00000560349 IGHV1OR15-1A0A075B7D0 117 aa10.38□□□□□ -0.75
CARMIL3-203ENST00000560349 GAGE10A6NGK3 116 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms