RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 FAM57AQ8TBR7 257 aa3.9□□□□□ -1.79
TPM1-222ENST00000560131 UBE2WQ96B02 151 aa3.9□□□□□ -1.79
TPM1-222ENST00000560131 PLEKHB2Q96CS7 222 aa3.9□□□□□ -1.79
TPM1-222ENST00000560131 AMELXQ99217 191 aa3.9□□□□□ -1.79
TPM1-222ENST00000560131 KIR2DL4Q99706 377 aa3.9□□□□□ -1.79
TPM1-222ENST00000560131 DEFB127Q9H1M4 99 aa3.9□□□□□ -1.79
TPM1-222ENST00000560131 IGLV4-69A0A075B6H9 119 aa3.89□□□□□ -1.79
TPM1-222ENST00000560131 IGLV11-55A0A075B6I3 123 aa3.89□□□□□ -1.79
TPM1-222ENST00000560131 TRAV2A0A0B4J234 112 aa3.89□□□□□ -1.79
TPM1-222ENST00000560131 SMIM1B2RUZ4 78 aa3.89□□□□□ -1.79
TPM1-222ENST00000560131 C9JAW5 83 aa3.89□□□□□ -1.79
TPM1-222ENST00000560131 LY6LH3BQJ8 138 aa3.89□□□□□ -1.79
TPM1-222ENST00000560131 UQCRQO14949 82 aa3.89□□□□□ -1.79
TPM1-222ENST00000560131 CRLF1O75462 422 aa3.89□□□□□ -1.79
TPM1-222ENST00000560131 NXPH4O95158 308 aa3.89□□□□□ -1.79
TPM1-222ENST00000560131 CNIH1O95406 144 aa3.89□□□□□ -1.79
TPM1-222ENST00000560131 GATA1P15976 413 aaPredicted RBP3.89□□□□□ -1.79
TPM1-222ENST00000560131 CCL3L1P16619 93 aa3.89□□□□□ -1.79
TPM1-222ENST00000560131 LOXP28300 417 aaPredicted RBP3.89□□□□□ -1.79
TPM1-222ENST00000560131 CXCL5P42830 114 aa3.89□□□□□ -1.79
TPM1-222ENST00000560131 EFNA4P52798 201 aa3.89□□□□□ -1.79
TPM1-222ENST00000560131 PMVKQ15126 192 aa3.89□□□□□ -1.79
TPM1-222ENST00000560131 IGFL2Q6UWQ7 119 aa3.89□□□□□ -1.79
TPM1-222ENST00000560131 C2orf66Q6UXQ4 117 aa3.89□□□□□ -1.79
TPM1-222ENST00000560131 C9orf106Q8NAJ2 232 aa3.89□□□□□ -1.79
TPM1-222ENST00000560131 LINC00526Q96FQ7 95 aa3.89□□□□□ -1.79
TPM1-222ENST00000560131 TMEM101Q96IK0 257 aa3.89□□□□□ -1.79
TPM1-222ENST00000560131 FAM218AQ96MZ4 157 aa3.89□□□□□ -1.79
TPM1-222ENST00000560131 DPH3P1Q9H4G8 78 aa3.89□□□□□ -1.79
TPM1-222ENST00000560131 ZNRD1Q9P1U0 126 aa3.89□□□□□ -1.79
TPM1-222ENST00000560131 IGIPA6NJ69 53 aa3.88□□□□□ -1.79
TPM1-222ENST00000560131 BUB1B-PAK6H3BSN5 160 aa3.88□□□□□ -1.79
TPM1-222ENST00000560131 J3KT08 172 aa3.88□□□□□ -1.79
TPM1-222ENST00000560131 LEPROTO15243 131 aa3.88□□□□□ -1.79
TPM1-222ENST00000560131 IGHV1-69P01742 117 aa3.88□□□□□ -1.79
TPM1-222ENST00000560131 TRGV3P03979 118 aa3.88□□□□□ -1.79
TPM1-222ENST00000560131 CRYGDP07320 174 aa3.88□□□□□ -1.79
TPM1-222ENST00000560131 ZNF876PQ49A33 203 aa3.88□□□□□ -1.79
TPM1-222ENST00000560131 DYNAPQ8N1N2 210 aa3.88□□□□□ -1.79
TPM1-222ENST00000560131 CNEP1R1Q8N9A8 125 aa3.88□□□□□ -1.79
TPM1-222ENST00000560131 CSDC2Q9Y534 153 aaKnown RBP3.88□□□□□ -1.79
TPM1-222ENST00000560131 SMAD5-AS1Q9Y6J3 95 aa3.88□□□□□ -1.79
TPM1-222ENST00000560131 IGHV3-21A0A0B4J1V1 117 aa3.87□□□□□ -1.79
TPM1-222ENST00000560131 TRBV6-5A0A0K0K1A5 114 aa3.87□□□□□ -1.79
TPM1-222ENST00000560131 H3BVH4 76 aa3.87□□□□□ -1.79
TPM1-222ENST00000560131 J3QQQ9 107 aa3.87□□□□□ -1.79
TPM1-222ENST00000560131 ENSAO43768 121 aaKnown RBP3.87□□□□□ -1.79
TPM1-222ENST00000560131 IGKV2-30P06310 120 aa3.87□□□□□ -1.79
TPM1-222ENST00000560131 COX6CP09669 75 aa3.87□□□□□ -1.79
TPM1-222ENST00000560131 Q6ZQT7 251 aa3.87□□□□□ -1.79
TPM1-222ENST00000560131 LINC00643Q86TS7 51 aa3.87□□□□□ -1.79
TPM1-222ENST00000560131 APRG1Q8IVJ8 170 aa3.87□□□□□ -1.79
TPM1-222ENST00000560131 C3orf22Q8N5N4 141 aa3.87□□□□□ -1.79
TPM1-222ENST00000560131 DEFB108BQ8NET1 73 aa3.87□□□□□ -1.79
TPM1-222ENST00000560131 Q8TAT8 98 aa3.87□□□□□ -1.79
TPM1-222ENST00000560131 AGPAT4-IT1Q9H0P7 198 aa3.87□□□□□ -1.79
TPM1-222ENST00000560131 PPDPFQ9H3Y8 114 aa3.87□□□□□ -1.79
TPM1-222ENST00000560131 C21orf62Q9NYP8 219 aa3.87□□□□□ -1.79
TPM1-222ENST00000560131 INTS1Q8N201 2190 aaKnown RBP3.87□□□□□ -1.79
TPM1-222ENST00000560131 TRANK1O15050 2925 aa3.86□□□□□ -1.79
TPM1-222ENST00000560131 A0A0J9YXY3 114 aa3.86□□□□□ -1.79
TPM1-222ENST00000560131 TMEM223A0PJW6 202 aa3.86□□□□□ -1.79
TPM1-222ENST00000560131 OOSP1A8MZH6 123 aa3.86□□□□□ -1.79
TPM1-222ENST00000560131 M0R1B8 84 aa3.86□□□□□ -1.79
TPM1-222ENST00000560131 LST1O00453 97 aa3.86□□□□□ -1.79
TPM1-222ENST00000560131 NBR2O15453 112 aa3.86□□□□□ -1.79
TPM1-222ENST00000560131 CRYGAP11844 174 aa3.86□□□□□ -1.79
TPM1-222ENST00000560131 PLA2G2AP14555 144 aa3.86□□□□□ -1.79
TPM1-222ENST00000560131 LGALS3P17931 250 aaKnown RBP3.86□□□□□ -1.79
TPM1-222ENST00000560131 CNTFRP26992 372 aa3.86□□□□□ -1.79
TPM1-222ENST00000560131 CRIP2P52943 208 aaPredicted RBP3.86□□□□□ -1.79
TPM1-222ENST00000560131 POLR2KP53803 58 aaKnown RBP3.86□□□□□ -1.79
TPM1-222ENST00000560131 RHOHQ15669 191 aa3.86□□□□□ -1.79
TPM1-222ENST00000560131 SPANXN1Q5VSR9 72 aa3.86□□□□□ -1.79
TPM1-222ENST00000560131 C2orf82Q6UX34 121 aa3.86□□□□□ -1.79
TPM1-222ENST00000560131 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.86□□□□□ -1.79
TPM1-222ENST00000560131 GPHB5Q86YW7 130 aa3.86□□□□□ -1.79
TPM1-222ENST00000560131 ZNRF2Q8NHG8 242 aa3.86□□□□□ -1.79
TPM1-222ENST00000560131 LINC00477Q96M19 166 aa3.86□□□□□ -1.79
TPM1-222ENST00000560131 UTRNP46939 3433 aa3.85□□□□□ -1.79
TPM1-222ENST00000560131 MALRD1Q5VYJ5 2156 aa3.85□□□□□ -1.79
TPM1-222ENST00000560131 TRAV17A0A0B4J275 112 aa3.85□□□□□ -1.79
TPM1-222ENST00000560131 TRAV21A0A0B4J279 112 aa3.85□□□□□ -1.79
TPM1-222ENST00000560131 TEX49A0A1B0GTD5 131 aa3.85□□□□□ -1.79
TPM1-222ENST00000560131 SMIM9A6NGZ8 99 aa3.85□□□□□ -1.79
TPM1-222ENST00000560131 H7C423 109 aa3.85□□□□□ -1.79
TPM1-222ENST00000560131 NPFFO15130 113 aa3.85□□□□□ -1.79
TPM1-222ENST00000560131 BUB3O43684 328 aa3.85□□□□□ -1.79
TPM1-222ENST00000560131 TIMM17BO60830 172 aa3.85□□□□□ -1.79
TPM1-222ENST00000560131 CTSGP08311 255 aa3.85□□□□□ -1.79
TPM1-222ENST00000560131 ID1P41134 155 aa3.85□□□□□ -1.79
TPM1-222ENST00000560131 HIST1H4AP62805 103 aaKnown RBP3.85□□□□□ -1.79
TPM1-222ENST00000560131 C5orf38Q86SI9 138 aa3.85□□□□□ -1.79
TPM1-222ENST00000560131 KLHL30-AS1Q8NEE0 82 aa3.85□□□□□ -1.79
TPM1-222ENST00000560131 OR13C6PQ8NH95 151 aa3.85□□□□□ -1.79
TPM1-222ENST00000560131 METTL26Q96S19 204 aa3.85□□□□□ -1.79
TPM1-222ENST00000560131 CTSZQ9UBR2 303 aa3.85□□□□□ -1.79
TPM1-222ENST00000560131 CHD9Q3L8U1 2897 aa3.85□□□□□ -1.79
TPM1-222ENST00000560131 PLXNB1O43157 2135 aa3.85□□□□□ -1.79
TPM1-222ENST00000560131 IGHV3-72A0A0B4J1Y9 119 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms