RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 RERGLQ9H628 205 aa1.12□□□□□ -2.23
CTDSPL2-207ENST00000559738 PARP14Q460N5 1801 aa1.12□□□□□ -2.23
CTDSPL2-207ENST00000559738 BCL9LQ86UU0 1499 aa1.12□□□□□ -2.23
CTDSPL2-207ENST00000559738 RBBP6Q7Z6E9 1792 aaKnown RBP1.11□□□□□ -2.23
CTDSPL2-207ENST00000559738 FLG2Q5D862 2391 aaPredicted RBP1.11□□□□□ -2.23
CTDSPL2-207ENST00000559738 MIF4GDA9UHW6 222 aaKnown RBP1.11□□□□□ -2.23
CTDSPL2-207ENST00000559738 F6UZH7 168 aa1.11□□□□□ -2.23
CTDSPL2-207ENST00000559738 FXYD1O00168 92 aa1.11□□□□□ -2.23
CTDSPL2-207ENST00000559738 IFNGP01579 166 aa1.11□□□□□ -2.23
CTDSPL2-207ENST00000559738 S100A1P23297 94 aa1.11□□□□□ -2.23
CTDSPL2-207ENST00000559738 UBE2G1P62253 170 aa1.11□□□□□ -2.23
CTDSPL2-207ENST00000559738 FXYD3Q14802 87 aa1.11□□□□□ -2.23
CTDSPL2-207ENST00000559738 WHAMMP3Q1A5X7 153 aa1.11□□□□□ -2.23
CTDSPL2-207ENST00000559738 XAF1Q6GPH4 301 aa1.11□□□□□ -2.23
CTDSPL2-207ENST00000559738 CYP2G1PQ6ZSU1 146 aa1.11□□□□□ -2.23
CTDSPL2-207ENST00000559738 TSKUQ8WUA8 353 aa1.11□□□□□ -2.23
CTDSPL2-207ENST00000559738 TMEM141Q96I45 108 aa1.11□□□□□ -2.23
CTDSPL2-207ENST00000559738 CCL19Q99731 98 aa1.11□□□□□ -2.23
CTDSPL2-207ENST00000559738 NAA60Q9H7X0 242 aa1.11□□□□□ -2.23
CTDSPL2-207ENST00000559738 SCN3BQ9NY72 215 aa1.11□□□□□ -2.23
CTDSPL2-207ENST00000559738 SERP1Q9Y6X1 66 aa1.11□□□□□ -2.23
CTDSPL2-207ENST00000559738 COL6A6A6NMZ7 2263 aa1.11□□□□□ -2.23
CTDSPL2-207ENST00000559738 RIMS1Q86UR5 1692 aaKnown RBP1.1□□□□□ -2.23
CTDSPL2-207ENST00000559738 FAM135AQ9P2D6 1515 aa1.1□□□□□ -2.23
CTDSPL2-207ENST00000559738 NWD2Q9ULI1 1742 aa1.1□□□□□ -2.23
CTDSPL2-207ENST00000559738 TRAV12-3A0A0B4J271 114 aa1.1□□□□□ -2.23
CTDSPL2-207ENST00000559738 NBDYA0A0U1RRE5 68 aa1.1□□□□□ -2.23
CTDSPL2-207ENST00000559738 SPTSSBQ8NFR3 76 aa1.1□□□□□ -2.23
CTDSPL2-207ENST00000559738 PP6455Q8WZ26 134 aa1.1□□□□□ -2.23
CTDSPL2-207ENST00000559738 LSM10Q969L4 123 aaKnown RBP1.1□□□□□ -2.23
CTDSPL2-207ENST00000559738 RPRMQ9NS64 109 aa1.1□□□□□ -2.23
CTDSPL2-207ENST00000559738 ESPL1Q14674 2120 aa1.1□□□□□ -2.23
CTDSPL2-207ENST00000559738 ARFGEF1Q9Y6D6 1849 aa1.1□□□□□ -2.23
CTDSPL2-207ENST00000559738 QRICH2Q9H0J4 1663 aa1.1□□□□□ -2.23
CTDSPL2-207ENST00000559738 PLXNA1Q9UIW2 1896 aa1.09□□□□□ -2.23
CTDSPL2-207ENST00000559738 NRXN2Q9P2S2 1712 aa1.09□□□□□ -2.23
CTDSPL2-207ENST00000559738 MYH8P13535 1937 aa1.09□□□□□ -2.23
CTDSPL2-207ENST00000559738 DAPK1P53355 1430 aa1.09□□□□□ -2.23
CTDSPL2-207ENST00000559738 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.09□□□□□ -2.23
CTDSPL2-207ENST00000559738 TRBV30A0A0K0K1B3 111 aa1.09□□□□□ -2.23
CTDSPL2-207ENST00000559738 MCRIP1C9JLW8 97 aa1.09□□□□□ -2.23
CTDSPL2-207ENST00000559738 NPC2P61916 151 aa1.09□□□□□ -2.23
CTDSPL2-207ENST00000559738 C9orf116Q5BN46 136 aaPredicted RBP1.09□□□□□ -2.23
CTDSPL2-207ENST00000559738 LINC00575Q6W349 94 aa1.09□□□□□ -2.23
CTDSPL2-207ENST00000559738 C5orf56Q8N8D9 126 aa1.09□□□□□ -2.23
CTDSPL2-207ENST00000559738 C10orf82Q8WW14 230 aa1.09□□□□□ -2.23
CTDSPL2-207ENST00000559738 LINC00208Q96KT6 92 aa1.09□□□□□ -2.23
CTDSPL2-207ENST00000559738 CGREF1Q99674 301 aa1.09□□□□□ -2.23
CTDSPL2-207ENST00000559738 PHIPQ8WWQ0 1821 aa1.09□□□□□ -2.23
CTDSPL2-207ENST00000559738 ZNF518AQ6AHZ1 1483 aa1.09□□□□□ -2.24
CTDSPL2-207ENST00000559738 SPAG17Q6Q759 2223 aa1.09□□□□□ -2.24
CTDSPL2-207ENST00000559738 ROS1P08922 2347 aa1.09□□□□□ -2.24
CTDSPL2-207ENST00000559738 MYOM2P54296 1465 aa1.08□□□□□ -2.24
CTDSPL2-207ENST00000559738 TEX49A0A1B0GTD5 131 aa1.08□□□□□ -2.24
CTDSPL2-207ENST00000559738 CBLN1P23435 193 aa1.08□□□□□ -2.24
CTDSPL2-207ENST00000559738 CAV3P56539 151 aa1.08□□□□□ -2.24
CTDSPL2-207ENST00000559738 BTG2P78543 158 aa1.08□□□□□ -2.24
CTDSPL2-207ENST00000559738 ZNF56Q15929 161 aa1.08□□□□□ -2.24
CTDSPL2-207ENST00000559738 Q56UQ5 140 aa1.08□□□□□ -2.24
CTDSPL2-207ENST00000559738 Q6AWC8 147 aa1.08□□□□□ -2.24
CTDSPL2-207ENST00000559738 Q6ZS92 163 aa1.08□□□□□ -2.24
CTDSPL2-207ENST00000559738 DEFB132Q7Z7B7 95 aa1.08□□□□□ -2.24
CTDSPL2-207ENST00000559738 NDUFA11Q86Y39 141 aa1.08□□□□□ -2.24
CTDSPL2-207ENST00000559738 KMT2BQ9UMN6 2715 aaPredicted RBP1.08□□□□□ -2.24
CTDSPL2-207ENST00000559738 KTN1Q86UP2 1357 aaKnown RBP1.08□□□□□ -2.24
CTDSPL2-207ENST00000559738 BLMP54132 1417 aaPredicted RBP1.07□□□□□ -2.24
CTDSPL2-207ENST00000559738 A2ML1A8K2U0 1454 aa1.07□□□□□ -2.24
CTDSPL2-207ENST00000559738 A0A1W2PPM0 123 aa1.07□□□□□ -2.24
CTDSPL2-207ENST00000559738 CORTO00230 105 aa1.07□□□□□ -2.24
CTDSPL2-207ENST00000559738 S100PP25815 95 aa1.07□□□□□ -2.24
CTDSPL2-207ENST00000559738 GNG4P50150 75 aa1.07□□□□□ -2.24
CTDSPL2-207ENST00000559738 TPPP2P59282 170 aa1.07□□□□□ -2.24
CTDSPL2-207ENST00000559738 MRPS10P82664 201 aaKnown RBP1.07□□□□□ -2.24
CTDSPL2-207ENST00000559738 RBM3P98179 157 aaKnown RBP1.07□□□□□ -2.24
CTDSPL2-207ENST00000559738 CATR1Q13166 79 aa1.07□□□□□ -2.24
CTDSPL2-207ENST00000559738 MRPL54Q6P161 138 aaKnown RBP1.07□□□□□ -2.24
CTDSPL2-207ENST00000559738 PATJQ8NI35 1801 aa1.07□□□□□ -2.24
CTDSPL2-207ENST00000559738 KIAA0100Q14667 2235 aaKnown RBP1.07□□□□□ -2.24
CTDSPL2-207ENST00000559738 ABCA4P78363 2273 aa1.06□□□□□ -2.24
CTDSPL2-207ENST00000559738 ARAP2Q8WZ64 1704 aa1.06□□□□□ -2.24
CTDSPL2-207ENST00000559738 HELZ2Q9BYK8 2649 aaKnown RBP1.06□□□□□ -2.24
CTDSPL2-207ENST00000559738 APOC4-APOC2K7ER74 178 aa1.06□□□□□ -2.24
CTDSPL2-207ENST00000559738 IFNA17P01571 189 aa1.06□□□□□ -2.24
CTDSPL2-207ENST00000559738 APOC2P02655 101 aa1.06□□□□□ -2.24
CTDSPL2-207ENST00000559738 ARL14EPLP0DKL9 152 aa1.06□□□□□ -2.24
CTDSPL2-207ENST00000559738 INSL4Q14641 139 aa1.06□□□□□ -2.24
CTDSPL2-207ENST00000559738 C9orf153Q5TBE3 101 aa1.06□□□□□ -2.24
CTDSPL2-207ENST00000559738 C12orf73Q69YU5 71 aa1.06□□□□□ -2.24
CTDSPL2-207ENST00000559738 CNTRLQ7Z7A1 2325 aa1.06□□□□□ -2.24
CTDSPL2-207ENST00000559738 LAMA4Q16363 1823 aa1.05□□□□□ -2.24
CTDSPL2-207ENST00000559738 DOCK2Q92608 1830 aa1.05□□□□□ -2.24
CTDSPL2-207ENST00000559738 DOCK1Q14185 1865 aa1.05□□□□□ -2.24
CTDSPL2-207ENST00000559738 ROBO1Q9Y6N7 1651 aa1.05□□□□□ -2.24
CTDSPL2-207ENST00000559738 PIGBOS1A0A0B4J2F0 54 aa1.05□□□□□ -2.24
CTDSPL2-207ENST00000559738 TRBV10-3A0A0K0K1G6 114 aa1.05□□□□□ -2.24
CTDSPL2-207ENST00000559738 PPP3R1P63098 170 aa1.05□□□□□ -2.24
CTDSPL2-207ENST00000559738 C20orf197Q8N268 126 aa1.05□□□□□ -2.24
CTDSPL2-207ENST00000559738 Q8N8P6 123 aa1.05□□□□□ -2.24
CTDSPL2-207ENST00000559738 COA4Q9NYJ1 87 aa1.05□□□□□ -2.24
CTDSPL2-207ENST00000559738 MED12Q93074 2177 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms