RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 ALKBH7Q9BT30 221 aaPredicted RBP12.42□□□□□ -0.42
CHRNA3-206ENST00000559658 ZMAT5Q9UDW3 170 aaKnown RBP12.42□□□□□ -0.42
CHRNA3-206ENST00000559658 MGPP08493 103 aa12.42□□□□□ -0.42
CHRNA3-206ENST00000559658 TRGV1A0A0A0MS02 117 aa12.41□□□□□ -0.42
CHRNA3-206ENST00000559658 CRYGDP07320 174 aa12.41□□□□□ -0.42
CHRNA3-206ENST00000559658 SYT8Q8NBV8 401 aa12.41□□□□□ -0.42
CHRNA3-206ENST00000559658 RNF183Q96D59 192 aa12.41□□□□□ -0.42
CHRNA3-206ENST00000559658 IGHV3-73A0A0B4J1V6 119 aa12.4□□□□□ -0.42
CHRNA3-206ENST00000559658 NDUFA6P56556 154 aa12.4□□□□□ -0.42
CHRNA3-206ENST00000559658 KRTAP21-3Q3LHN1 58 aa12.4□□□□□ -0.42
CHRNA3-206ENST00000559658 POM121L12Q8N7R1 296 aa12.4□□□□□ -0.42
CHRNA3-206ENST00000559658 DPH3P1Q9H4G8 78 aa12.4□□□□□ -0.42
CHRNA3-206ENST00000559658 LINC00310P59036 64 aa12.4□□□□□ -0.42
CHRNA3-206ENST00000559658 IGHV4-28A0A0C4DH34 117 aa12.39□□□□□ -0.43
CHRNA3-206ENST00000559658 NPYP01303 97 aa12.39□□□□□ -0.43
CHRNA3-206ENST00000559658 Q6ZWC4 215 aa12.39□□□□□ -0.43
CHRNA3-206ENST00000559658 C18orf32Q8TCD1 76 aa12.39□□□□□ -0.43
CHRNA3-206ENST00000559658 OVOL2Q9BRP0 275 aa12.39□□□□□ -0.43
CHRNA3-206ENST00000559658 SPXQ9BT56 116 aa12.39□□□□□ -0.43
CHRNA3-206ENST00000559658 UBE2CO00762 179 aa12.38□□□□□ -0.43
CHRNA3-206ENST00000559658 CFAP126Q5VTH2 177 aa12.38□□□□□ -0.43
CHRNA3-206ENST00000559658 SBSPONQ8IVN8 264 aa12.38□□□□□ -0.43
CHRNA3-206ENST00000559658 Q8NAQ8 132 aa12.38□□□□□ -0.43
CHRNA3-206ENST00000559658 RASL10AQ92737 203 aa12.38□□□□□ -0.43
CHRNA3-206ENST00000559658 U3KQK5 164 aa12.38□□□□□ -0.43
CHRNA3-206ENST00000559658 NUPR1O60356 82 aa12.38□□□□□ -0.43
CHRNA3-206ENST00000559658 DAZ2Q13117 558 aaKnown RBP12.38□□□□□ -0.43
CHRNA3-206ENST00000559658 UFSP1Q6NVU6 142 aa12.38□□□□□ -0.43
CHRNA3-206ENST00000559658 SMIM15Q7Z3B0 74 aa12.38□□□□□ -0.43
CHRNA3-206ENST00000559658 CKS2P33552 79 aa12.37□□□□□ -0.43
CHRNA3-206ENST00000559658 SNRPEP62304 92 aaKnown RBP12.37□□□□□ -0.43
CHRNA3-206ENST00000559658 RPL39LQ96EH5 51 aaKnown RBP12.37□□□□□ -0.43
CHRNA3-206ENST00000559658 GAGE12BA1L429 117 aa12.36□□□□□ -0.43
CHRNA3-206ENST00000559658 GAGE7O76087 117 aa12.36□□□□□ -0.43
CHRNA3-206ENST00000559658 IGHV3-53P01767 116 aa12.36□□□□□ -0.43
CHRNA3-206ENST00000559658 GAGE12FP0CL80 117 aa12.36□□□□□ -0.43
CHRNA3-206ENST00000559658 GAGE12GP0CL81 117 aa12.36□□□□□ -0.43
CHRNA3-206ENST00000559658 GAGE12IP0CL82 117 aa12.36□□□□□ -0.43
CHRNA3-206ENST00000559658 SUMO4Q6EEV6 95 aa12.36□□□□□ -0.43
CHRNA3-206ENST00000559658 Q6ZSN1 163 aa12.36□□□□□ -0.43
CHRNA3-206ENST00000559658 ORMDL3Q8N138 153 aa12.36□□□□□ -0.43
CHRNA3-206ENST00000559658 PRELID3AQ96N28 172 aa12.36□□□□□ -0.43
CHRNA3-206ENST00000559658 ZNF56Q15929 161 aa12.36□□□□□ -0.43
CHRNA3-206ENST00000559658 DEFB121Q5J5C9 76 aa12.36□□□□□ -0.43
CHRNA3-206ENST00000559658 NRACQ8N912 160 aa12.36□□□□□ -0.43
CHRNA3-206ENST00000559658 MRAPQ8TCY5 172 aa12.36□□□□□ -0.43
CHRNA3-206ENST00000559658 PTH2Q96A98 100 aa12.36□□□□□ -0.43
CHRNA3-206ENST00000559658 URB1-AS1Q96HZ7 61 aa12.36□□□□□ -0.43
CHRNA3-206ENST00000559658 MEGF8Q7Z7M0 2845 aa12.35□□□□□ -0.43
CHRNA3-206ENST00000559658 SMIM17P0DL12 118 aa12.35□□□□□ -0.43
CHRNA3-206ENST00000559658 PDZD11Q5EBL8 140 aa12.35□□□□□ -0.43
CHRNA3-206ENST00000559658 ZNF479Q96JC4 524 aa12.35□□□□□ -0.43
CHRNA3-206ENST00000559658 Q9UF83 564 aa12.35□□□□□ -0.43
CHRNA3-206ENST00000559658 CELA1Q9UNI1 258 aa12.35□□□□□ -0.43
CHRNA3-206ENST00000559658 HUWE1Q7Z6Z7 4374 aaKnown RBP12.34□□□□□ -0.43
CHRNA3-206ENST00000559658 SMIM9A6NGZ8 99 aa12.34□□□□□ -0.43
CHRNA3-206ENST00000559658 F5H697 171 aa12.34□□□□□ -0.43
CHRNA3-206ENST00000559658 RS1O15537 224 aa12.34□□□□□ -0.43
CHRNA3-206ENST00000559658 C5orf52A6NGY3 159 aa12.34□□□□□ -0.43
CHRNA3-206ENST00000559658 SERF1AO75920 110 aa12.34□□□□□ -0.43
CHRNA3-206ENST00000559658 P0DMU3 169 aa12.34□□□□□ -0.43
CHRNA3-206ENST00000559658 FAM231AP0DMU4 169 aa12.34□□□□□ -0.43
CHRNA3-206ENST00000559658 FAM231CP0DMU5 169 aa12.34□□□□□ -0.43
CHRNA3-206ENST00000559658 FAM222AQ5U5X8 452 aa12.34□□□□□ -0.43
CHRNA3-206ENST00000559658 LOC389332A0A1B0GUA5 103 aa12.33□□□□□ -0.44
CHRNA3-206ENST00000559658 A8MWV9 139 aa12.33□□□□□ -0.44
CHRNA3-206ENST00000559658 TNFRSF6BO95407 300 aa12.33□□□□□ -0.44
CHRNA3-206ENST00000559658 S100A6P06703 90 aa12.33□□□□□ -0.44
CHRNA3-206ENST00000559658 Q0VG73 95 aa12.33□□□□□ -0.44
CHRNA3-206ENST00000559658 LGALS9BQ3B8N2 356 aa12.33□□□□□ -0.44
CHRNA3-206ENST00000559658 COL7A1Q02388 2944 aa12.32□□□□□ -0.44
CHRNA3-206ENST00000559658 DEFB130BP0DP73 79 aa12.32□□□□□ -0.44
CHRNA3-206ENST00000559658 DEFB130AP0DP74 79 aa12.32□□□□□ -0.44
CHRNA3-206ENST00000559658 PIK3CD-AS1Q5SR53 167 aa12.32□□□□□ -0.44
CHRNA3-206ENST00000559658 IFITM10A6NMD0 228 aa12.31□□□□□ -0.44
CHRNA3-206ENST00000559658 MIFP14174 115 aa12.31□□□□□ -0.44
CHRNA3-206ENST00000559658 OR10J3Q5JRS4 329 aa12.31□□□□□ -0.44
CHRNA3-206ENST00000559658 BAGE3Q86Y29 109 aa12.31□□□□□ -0.44
CHRNA3-206ENST00000559658 MRAP2Q96G30 205 aa12.31□□□□□ -0.44
CHRNA3-206ENST00000559658 COA6Q5JTJ3 125 aaKnown RBP12.31□□□□□ -0.44
CHRNA3-206ENST00000559658 LINC00612Q8N6U2 182 aa12.31□□□□□ -0.44
CHRNA3-206ENST00000559658 OR4C5Q8NGB2 326 aa12.31□□□□□ -0.44
CHRNA3-206ENST00000559658 DEFB104AQ8WTQ1 72 aa12.31□□□□□ -0.44
CHRNA3-206ENST00000559658 TRGV2A0A075B6R0 118 aa12.3□□□□□ -0.44
CHRNA3-206ENST00000559658 M0QY20 66 aa12.3□□□□□ -0.44
CHRNA3-206ENST00000559658 IFI27P40305 119 aaPredicted RBP12.3□□□□□ -0.44
CHRNA3-206ENST00000559658 DKK2Q9UBU2 259 aa12.3□□□□□ -0.44
CHRNA3-206ENST00000559658 PPBPP02775 128 aa12.29□□□□□ -0.44
CHRNA3-206ENST00000559658 NEGR1Q7Z3B1 354 aa12.29□□□□□ -0.44
CHRNA3-206ENST00000559658 TP53TG1Q9Y2A0 90 aa12.29□□□□□ -0.44
CHRNA3-206ENST00000559658 DNAH9Q9NYC9 4486 aa12.29□□□□□ -0.44
CHRNA3-206ENST00000559658 TRAV4A0A0B4J268 109 aa12.29□□□□□ -0.44
CHRNA3-206ENST00000559658 RNASEKQ6P5S7 137 aaKnown RBP12.29□□□□□ -0.44
CHRNA3-206ENST00000559658 HIST3H2BBQ8N257 126 aa12.29□□□□□ -0.44
CHRNA3-206ENST00000559658 PRKDCP78527 4128 aaKnown RBP12.28□□□□□ -0.44
CHRNA3-206ENST00000559658 LOC105371267A0A1B0GV96 52 aa12.28□□□□□ -0.44
CHRNA3-206ENST00000559658 HOXA5P20719 270 aa12.28□□□□□ -0.44
CHRNA3-206ENST00000559658 PMCHL1Q16048 86 aa12.28□□□□□ -0.44
CHRNA3-206ENST00000559658 NIT1Q86X76 327 aa12.28□□□□□ -0.44
CHRNA3-206ENST00000559658 NDUFAF3Q9BU61 184 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms