RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 FGF8P55075 233 aaPredicted RBP8.6□□□□□ -1.03
TPM1-220ENST00000559556 SERF2P84101 59 aa8.6□□□□□ -1.03
TPM1-220ENST00000559556 C14orf178Q8N769 122 aaPredicted RBP8.6□□□□□ -1.03
TPM1-220ENST00000559556 STOML3Q8TAV4 291 aa8.6□□□□□ -1.03
TPM1-220ENST00000559556 RMI2Q96E14 147 aa8.6□□□□□ -1.03
TPM1-220ENST00000559556 JPT2Q9H910 190 aa8.6□□□□□ -1.03
TPM1-220ENST00000559556 ARL2-SNX15V9GYD0 113 aa8.6□□□□□ -1.03
TPM1-220ENST00000559556 A0A1W2PRE2 83 aa8.59□□□□□ -1.03
TPM1-220ENST00000559556 RHODO00212 210 aa8.59□□□□□ -1.03
TPM1-220ENST00000559556 MBP02144 154 aa8.59□□□□□ -1.03
TPM1-220ENST00000559556 ASIPP42127 132 aa8.59□□□□□ -1.03
TPM1-220ENST00000559556 KRTAP10-4P60372 401 aaPredicted RBP8.59□□□□□ -1.03
TPM1-220ENST00000559556 LINC01620Q4KN68 170 aa8.59□□□□□ -1.03
TPM1-220ENST00000559556 DNLZQ5SXM8 178 aa8.59□□□□□ -1.03
TPM1-220ENST00000559556 RPL7L1Q6DKI1 246 aaKnown RBP8.59□□□□□ -1.03
TPM1-220ENST00000559556 NIT1Q86X76 327 aa8.59□□□□□ -1.03
TPM1-220ENST00000559556 BAALCQ8WXS3 180 aa8.59□□□□□ -1.03
TPM1-220ENST00000559556 SAMD10Q9BYL1 202 aa8.59□□□□□ -1.03
TPM1-220ENST00000559556 CYTL1Q9NRR1 136 aa8.59□□□□□ -1.03
TPM1-220ENST00000559556 FABP5P3A8MUU1 101 aa8.58□□□□□ -1.04
TPM1-220ENST00000559556 H3BVH4 76 aa8.58□□□□□ -1.04
TPM1-220ENST00000559556 SEC11BP0C7V7 166 aa8.58□□□□□ -1.04
TPM1-220ENST00000559556 Q86TA4 180 aa8.58□□□□□ -1.04
TPM1-220ENST00000559556 Q8N976 141 aa8.58□□□□□ -1.04
TPM1-220ENST00000559556 DNAJC30Q96LL9 226 aa8.58□□□□□ -1.04
TPM1-220ENST00000559556 CHAC1Q9BUX1 264 aa8.58□□□□□ -1.04
TPM1-220ENST00000559556 URGCP-MRPS24S4R325 110 aa8.58□□□□□ -1.04
TPM1-220ENST00000559556 TRAV34A0A0B4J273 112 aa8.57□□□□□ -1.04
TPM1-220ENST00000559556 B4DEV8 164 aa8.57□□□□□ -1.04
TPM1-220ENST00000559556 DMRTA1Q5VZB9 504 aa8.57□□□□□ -1.04
TPM1-220ENST00000559556 ATRAIDQ6UW56 229 aa8.57□□□□□ -1.04
TPM1-220ENST00000559556 CHCHD7Q9BUK0 85 aa8.57□□□□□ -1.04
TPM1-220ENST00000559556 ACTR3CQ9C0K3 210 aaPredicted RBP8.57□□□□□ -1.04
TPM1-220ENST00000559556 IGKV2D-24A0A075B6R9 120 aa8.56□□□□□ -1.04
TPM1-220ENST00000559556 RBFOX3A6NFN3 312 aa8.56□□□□□ -1.04
TPM1-220ENST00000559556 KRBOX1C9JBD0 128 aa8.56□□□□□ -1.04
TPM1-220ENST00000559556 IFNA7P01567 189 aa8.56□□□□□ -1.04
TPM1-220ENST00000559556 SYT8Q8NBV8 401 aa8.56□□□□□ -1.04
TPM1-220ENST00000559556 KLK12Q9UKR0 248 aa8.56□□□□□ -1.04
TPM1-220ENST00000559556 UBR4Q5T4S7 5183 aa8.55□□□□□ -1.04
TPM1-220ENST00000559556 UMAD1C9J7I0 102 aa8.55□□□□□ -1.04
TPM1-220ENST00000559556 PEX7O00628 323 aa8.55□□□□□ -1.04
TPM1-220ENST00000559556 RAB5CP51148 216 aa8.55□□□□□ -1.04
TPM1-220ENST00000559556 SERTAD4-AS1Q5TG53 156 aa8.55□□□□□ -1.04
TPM1-220ENST00000559556 FAM74A4Q5TZK3 123 aa8.55□□□□□ -1.04
TPM1-220ENST00000559556 COX8CQ7Z4L0 72 aa8.55□□□□□ -1.04
TPM1-220ENST00000559556 ZC2HC1AQ96GY0 325 aa8.55□□□□□ -1.04
TPM1-220ENST00000559556 A0A087WX48 190 aa8.54□□□□□ -1.04
TPM1-220ENST00000559556 CTXND1A0A1B0GTU2 59 aa8.54□□□□□ -1.04
TPM1-220ENST00000559556 ARMS2P0C7Q2 107 aa8.54□□□□□ -1.04
TPM1-220ENST00000559556 CRIP1P50238 77 aa8.54□□□□□ -1.04
TPM1-220ENST00000559556 ELOBQ15370 118 aa8.54□□□□□ -1.04
TPM1-220ENST00000559556 ZNF726P1Q15940 193 aa8.54□□□□□ -1.04
TPM1-220ENST00000559556 TEX261Q6UWH6 196 aa8.54□□□□□ -1.04
TPM1-220ENST00000559556 CIRBP-AS1Q8TBR5 109 aa8.54□□□□□ -1.04
TPM1-220ENST00000559556 HIST1H2BAQ96A08 127 aa8.54□□□□□ -1.04
TPM1-220ENST00000559556 UBE2WQ96B02 151 aa8.54□□□□□ -1.04
TPM1-220ENST00000559556 SFRP2Q96HF1 295 aa8.54□□□□□ -1.04
TPM1-220ENST00000559556 A0A087WWL8 130 aa8.53□□□□□ -1.04
TPM1-220ENST00000559556 TRBV10-1A0A0K0K1A3 114 aa8.53□□□□□ -1.04
TPM1-220ENST00000559556 FAM74A7A6NL05 159 aa8.53□□□□□ -1.04
TPM1-220ENST00000559556 M0R036 132 aa8.53□□□□□ -1.04
TPM1-220ENST00000559556 SH2D1AO60880 128 aa8.53□□□□□ -1.04
TPM1-220ENST00000559556 OXTP01178 125 aa8.53□□□□□ -1.04
TPM1-220ENST00000559556 IGLV2-8P01709 118 aa8.53□□□□□ -1.04
TPM1-220ENST00000559556 UBE2G2P60604 165 aa8.53□□□□□ -1.04
TPM1-220ENST00000559556 AKR1C8PQ5T2L2 129 aa8.53□□□□□ -1.04
TPM1-220ENST00000559556 LCE2DQ5TA82 110 aaPredicted RBP8.53□□□□□ -1.04
TPM1-220ENST00000559556 NKX6-2Q9C056 277 aaPredicted RBP8.53□□□□□ -1.04
TPM1-220ENST00000559556 PHLDA3Q9Y5J5 127 aa8.53□□□□□ -1.04
TPM1-220ENST00000559556 UBE2D3P61077 147 aa8.52□□□□□ -1.05
TPM1-220ENST00000559556 UBE2D2P62837 147 aa8.52□□□□□ -1.05
TPM1-220ENST00000559556 Q0VG73 95 aa8.52□□□□□ -1.05
TPM1-220ENST00000559556 LINC01559Q495D7 138 aa8.52□□□□□ -1.05
TPM1-220ENST00000559556 C14orf177Q52M58 125 aa8.52□□□□□ -1.05
TPM1-220ENST00000559556 FAM162BQ5T6X4 162 aa8.52□□□□□ -1.05
TPM1-220ENST00000559556 ZFP30Q9Y2G7 519 aa8.52□□□□□ -1.05
TPM1-220ENST00000559556 TRBV7-3A0A075B6L6 115 aa8.51□□□□□ -1.05
TPM1-220ENST00000559556 GRIFINA4D1Z8 144 aa8.51□□□□□ -1.05
TPM1-220ENST00000559556 M0R381 172 aa8.51□□□□□ -1.05
TPM1-220ENST00000559556 RAB14P61106 215 aa8.51□□□□□ -1.05
TPM1-220ENST00000559556 RPL36AP83881 106 aaKnown RBP8.51□□□□□ -1.05
TPM1-220ENST00000559556 ZNF674Q2M3X9 581 aa8.51□□□□□ -1.05
TPM1-220ENST00000559556 ZFP82Q8N141 532 aa8.51□□□□□ -1.05
TPM1-220ENST00000559556 OR10G8Q8NGN5 311 aa8.51□□□□□ -1.05
TPM1-220ENST00000559556 RPL36ALQ969Q0 106 aaKnown RBP8.51□□□□□ -1.05
TPM1-220ENST00000559556 FMC1Q96HJ9 113 aa8.51□□□□□ -1.05
TPM1-220ENST00000559556 C1orf43Q9BWL3 253 aa8.51□□□□□ -1.05
TPM1-220ENST00000559556 TRBV6-1A0A0K0K1D8 114 aa8.5□□□□□ -1.05
TPM1-220ENST00000559556 TEX46H3BTG2 121 aa8.5□□□□□ -1.05
TPM1-220ENST00000559556 SULT1A2P50226 295 aa8.5□□□□□ -1.05
TPM1-220ENST00000559556 KCNIP4Q6PIL6 250 aa8.5□□□□□ -1.05
TPM1-220ENST00000559556 TNXBP22105 4242 aa8.49□□□□□ -1.05
TPM1-220ENST00000559556 TRBV6-8A0A0A6YYG3 113 aa8.49□□□□□ -1.05
TPM1-220ENST00000559556 UBE2G1P62253 170 aa8.49□□□□□ -1.05
TPM1-220ENST00000559556 BLOC1S1P78537 153 aa8.49□□□□□ -1.05
TPM1-220ENST00000559556 ENHOQ6UWT2 76 aa8.49□□□□□ -1.05
TPM1-220ENST00000559556 ALKAL2Q6UX46 152 aa8.49□□□□□ -1.05
TPM1-220ENST00000559556 TCEAL7Q9BRU2 100 aa8.49□□□□□ -1.05
TPM1-220ENST00000559556 TMSB15BA0A087X1C1 80 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms