RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 A0A1B0GW64 132 aa-0.76□□□□□ -2.53
CASC4-210ENST00000559550 CFDP00746 253 aaPredicted RBP-0.76□□□□□ -2.53
CASC4-210ENST00000559550 SLC25A6P12236 298 aa-0.76□□□□□ -2.53
CASC4-210ENST00000559550 COX4I1P13073 169 aa-0.76□□□□□ -2.53
CASC4-210ENST00000559550 HIST1H1BP16401 226 aaKnown RBP-0.76□□□□□ -2.53
CASC4-210ENST00000559550 PSPHP78330 225 aa-0.76□□□□□ -2.53
CASC4-210ENST00000559550 OR9Q1Q8NGQ5 310 aa-0.76□□□□□ -2.53
CASC4-210ENST00000559550 IFI27L1Q96BM0 104 aa-0.76□□□□□ -2.53
CASC4-210ENST00000559550 Q96NJ1 140 aa-0.76□□□□□ -2.53
CASC4-210ENST00000559550 SLC35B3Q9H1N7 401 aa-0.76□□□□□ -2.53
CASC4-210ENST00000559550 APC2O95996 2303 aa-0.77□□□□□ -2.53
CASC4-210ENST00000559550 CCL3L1P16619 93 aa-0.77□□□□□ -2.53
CASC4-210ENST00000559550 CYP2G1PQ6ZSU1 146 aa-0.77□□□□□ -2.53
CASC4-210ENST00000559550 TMEM242Q9NWH2 141 aa-0.77□□□□□ -2.53
CASC4-210ENST00000559550 DNAJC15Q9Y5T4 150 aa-0.77□□□□□ -2.53
CASC4-210ENST00000559550 COL6A3P12111 3177 aa-0.78□□□□□ -2.53
CASC4-210ENST00000559550 SONP18583 2426 aaKnown RBP-0.78□□□□□ -2.53
CASC4-210ENST00000559550 CCDC171Q6TFL3 1326 aa-0.78□□□□□ -2.53
CASC4-210ENST00000559550 NPC2P61916 151 aa-0.78□□□□□ -2.53
CASC4-210ENST00000559550 OR8B8Q15620 311 aa-0.78□□□□□ -2.53
CASC4-210ENST00000559550 TMEM128Q5BJH2 165 aa-0.78□□□□□ -2.53
CASC4-210ENST00000559550 DOCK11Q5JSL3 2073 aa-0.78□□□□□ -2.53
CASC4-210ENST00000559550 TGP01266 2768 aa-0.78□□□□□ -2.53
CASC4-210ENST00000559550 ALMS1Q8TCU4 4167 aa-0.78□□□□□ -2.53
CASC4-210ENST00000559550 FLGP20930 4061 aaPredicted RBP-0.78□□□□□ -2.53
CASC4-210ENST00000559550 LAMB1P07942 1786 aa-0.78□□□□□ -2.53
CASC4-210ENST00000559550 CASZ1Q86V15 1759 aa-0.78□□□□□ -2.53
CASC4-210ENST00000559550 DOPEY2Q9Y3R5 2298 aa-0.78□□□□□ -2.54
CASC4-210ENST00000559550 PTPRMP28827 1452 aa-0.79□□□□□ -2.54
CASC4-210ENST00000559550 TRAV2A0A0B4J234 112 aa-0.79□□□□□ -2.54
CASC4-210ENST00000559550 MT-ND4LP03901 98 aa-0.79□□□□□ -2.54
CASC4-210ENST00000559550 SAMD13Q5VXD3 122 aa-0.79□□□□□ -2.54
CASC4-210ENST00000559550 TOMM20LQ6UXN7 152 aa-0.79□□□□□ -2.54
CASC4-210ENST00000559550 TMEM91Q6ZNR0 172 aa-0.79□□□□□ -2.54
CASC4-210ENST00000559550 Q6ZRX8 168 aa-0.79□□□□□ -2.54
CASC4-210ENST00000559550 SNX29P2Q8IUI4 249 aa-0.79□□□□□ -2.54
CASC4-210ENST00000559550 C4orf33Q8N1A6 199 aa-0.79□□□□□ -2.54
CASC4-210ENST00000559550 SMPXQ9UHP9 88 aa-0.79□□□□□ -2.54
CASC4-210ENST00000559550 PLXNA2O75051 1894 aa-0.8□□□□□ -2.54
CASC4-210ENST00000559550 C2CD3Q4AC94 2353 aa-0.8□□□□□ -2.54
CASC4-210ENST00000559550 SSBP1Q04837 148 aaKnown RBP-0.8□□□□□ -2.54
CASC4-210ENST00000559550 TMEM35BQ8NCS4 154 aa-0.8□□□□□ -2.54
CASC4-210ENST00000559550 KDM5CP41229 1560 aa-0.8□□□□□ -2.54
CASC4-210ENST00000559550 EPG5Q9HCE0 2579 aa-0.8□□□□□ -2.54
CASC4-210ENST00000559550 OVOS2A0A0G2JMS6 1433 aa-0.81□□□□□ -2.54
CASC4-210ENST00000559550 FLNBO75369 2602 aaKnown RBP-0.81□□□□□ -2.54
CASC4-210ENST00000559550 PKDREJQ9NTG1 2253 aa-0.81□□□□□ -2.54
CASC4-210ENST00000559550 MAP1BP46821 2468 aaKnown RBP-0.81□□□□□ -2.54
CASC4-210ENST00000559550 TRBV7-1A0A0A6YYK4 115 aa-0.81□□□□□ -2.54
CASC4-210ENST00000559550 ACYP2P14621 99 aa-0.81□□□□□ -2.54
CASC4-210ENST00000559550 SSBP3-AS1Q7Z2R9 100 aa-0.81□□□□□ -2.54
CASC4-210ENST00000559550 NDUFA11Q86Y39 141 aa-0.81□□□□□ -2.54
CASC4-210ENST00000559550 C20orf197Q8N268 126 aa-0.81□□□□□ -2.54
CASC4-210ENST00000559550 COX7B2Q8TF08 81 aa-0.81□□□□□ -2.54
CASC4-210ENST00000559550 DYNLRB2Q8TF09 96 aa-0.81□□□□□ -2.54
CASC4-210ENST00000559550 CYP4F30PQ9H0H9 118 aa-0.81□□□□□ -2.54
CASC4-210ENST00000559550 KIAA0100Q14667 2235 aaKnown RBP-0.81□□□□□ -2.54
CASC4-210ENST00000559550 ZNF142P52746 1687 aaPredicted RBP-0.81□□□□□ -2.54
CASC4-210ENST00000559550 FAT2Q9NYQ8 4349 aa-0.82□□□□□ -2.54
CASC4-210ENST00000559550 BSNQ9UPA5 3926 aa-0.82□□□□□ -2.54
CASC4-210ENST00000559550 DPM2O94777 84 aa-0.82□□□□□ -2.54
CASC4-210ENST00000559550 SPRR2DP22532 72 aa-0.82□□□□□ -2.54
CASC4-210ENST00000559550 SLC48A1Q6P1K1 146 aa-0.82□□□□□ -2.54
CASC4-210ENST00000559550 ATP6V0E2Q8NHE4 81 aa-0.82□□□□□ -2.54
CASC4-210ENST00000559550 NOP16Q9Y3C1 178 aaKnown RBP-0.82□□□□□ -2.54
CASC4-210ENST00000559550 VWFP04275 2813 aa-0.83□□□□□ -2.54
CASC4-210ENST00000559550 MXRA5Q9NR99 2828 aa-0.83□□□□□ -2.54
CASC4-210ENST00000559550 LAMA2P24043 3122 aaKnown RBP-0.83□□□□□ -2.54
CASC4-210ENST00000559550 A0A1B0GV72 72 aa-0.83□□□□□ -2.54
CASC4-210ENST00000559550 ZNF815PA8K554 130 aa-0.83□□□□□ -2.54
CASC4-210ENST00000559550 PAEPP09466 180 aa-0.83□□□□□ -2.54
CASC4-210ENST00000559550 GCHFRP30047 84 aa-0.83□□□□□ -2.54
CASC4-210ENST00000559550 TMEM244Q5VVB8 128 aa-0.83□□□□□ -2.54
CASC4-210ENST00000559550 BANF2Q9H503 90 aa-0.83□□□□□ -2.54
CASC4-210ENST00000559550 CALML5Q9NZT1 146 aa-0.83□□□□□ -2.54
CASC4-210ENST00000559550 V9GYV3 84 aa-0.83□□□□□ -2.54
CASC4-210ENST00000559550 ITPR3Q14573 2671 aa-0.83□□□□□ -2.54
CASC4-210ENST00000559550 SVEP1Q4LDE5 3571 aa-0.84□□□□□ -2.54
CASC4-210ENST00000559550 KIF13AQ9H1H9 1805 aa-0.84□□□□□ -2.54
CASC4-210ENST00000559550 TRGV1A0A0A0MS02 117 aa-0.84□□□□□ -2.54
CASC4-210ENST00000559550 TMEM14DPA8MWL7 114 aa-0.84□□□□□ -2.54
CASC4-210ENST00000559550 J3KT08 172 aa-0.84□□□□□ -2.54
CASC4-210ENST00000559550 HLA-DRB4P13762 266 aa-0.84□□□□□ -2.54
CASC4-210ENST00000559550 INSL4Q14641 139 aa-0.84□□□□□ -2.54
CASC4-210ENST00000559550 OR8I2Q8N0Y5 310 aa-0.84□□□□□ -2.54
CASC4-210ENST00000559550 HLA-DRB4X5D2U9 266 aa-0.84□□□□□ -2.54
CASC4-210ENST00000559550 TEP1Q99973 2627 aaKnown RBP-0.84□□□□□ -2.54
CASC4-210ENST00000559550 MUC17Q685J3 4493 aa-0.84□□□□□ -2.54
CASC4-210ENST00000559550 PIEZO2Q9H5I5 2752 aa-0.84□□□□□ -2.54
CASC4-210ENST00000559550 PLXNA1Q9UIW2 1896 aa-0.84□□□□□ -2.54
CASC4-210ENST00000559550 DNHD1Q96M86 4753 aa-0.84□□□□□ -2.54
CASC4-210ENST00000559550 NBPF19A0A087WUL8 3843 aa-0.85□□□□□ -2.54
CASC4-210ENST00000559550 UHRF1BP1LA0JNW5 1464 aa-0.85□□□□□ -2.55
CASC4-210ENST00000559550 NIPBLQ6KC79 2804 aaeCLIP-0.85□□□□□ -2.55
CASC4-210ENST00000559550 FABP1P07148 127 aa-0.85□□□□□ -2.55
CASC4-210ENST00000559550 RPS28P62857 69 aaKnown RBP-0.85□□□□□ -2.55
CASC4-210ENST00000559550 FAM74A4Q5TZK3 123 aa-0.85□□□□□ -2.55
CASC4-210ENST00000559550 UBE2DNLQ8IWF7 75 aa-0.85□□□□□ -2.55
CASC4-210ENST00000559550 ERG28Q9UKR5 140 aa-0.85□□□□□ -2.55
CASC4-210ENST00000559550 TRAV12-3A0A0B4J271 114 aa-0.86□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms