RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 FBN3Q75N90 2809 aa11.95□□□□□ -0.5
TPM1-219ENST00000559397 CKS2P33552 79 aa11.95□□□□□ -0.5
TPM1-219ENST00000559397 NIT1Q86X76 327 aa11.95□□□□□ -0.5
TPM1-219ENST00000559397 RNF183Q96D59 192 aa11.95□□□□□ -0.5
TPM1-219ENST00000559397 PRELID3AQ96N28 172 aa11.95□□□□□ -0.5
TPM1-219ENST00000559397 TM2D3Q9BRN9 247 aa11.95□□□□□ -0.5
TPM1-219ENST00000559397 CBY3A6NI87 242 aa11.94□□□□□ -0.5
TPM1-219ENST00000559397 ZNF705AQ6ZN79 300 aaPredicted RBP11.94□□□□□ -0.5
TPM1-219ENST00000559397 AP1S3Q96PC3 154 aa11.94□□□□□ -0.5
TPM1-219ENST00000559397 TP53TG1Q9Y2A0 90 aa11.94□□□□□ -0.5
TPM1-219ENST00000559397 LAMTOR2Q9Y2Q5 125 aa11.94□□□□□ -0.5
TPM1-219ENST00000559397 SMKR1H3BMG3 65 aa11.93□□□□□ -0.5
TPM1-219ENST00000559397 LINC00518Q8N0U6 118 aa11.93□□□□□ -0.5
TPM1-219ENST00000559397 POM121L12Q8N7R1 296 aa11.93□□□□□ -0.5
TPM1-219ENST00000559397 CHCHD1Q96BP2 118 aaKnown RBP11.93□□□□□ -0.5
TPM1-219ENST00000559397 LINC01587Q99440 93 aa11.93□□□□□ -0.5
TPM1-219ENST00000559397 OVOL2Q9BRP0 275 aa11.93□□□□□ -0.5
TPM1-219ENST00000559397 DPH3P1Q9H4G8 78 aa11.93□□□□□ -0.5
TPM1-219ENST00000559397 RETNQ9HD89 108 aa11.93□□□□□ -0.5
TPM1-219ENST00000559397 GOLT1BQ9Y3E0 138 aa11.93□□□□□ -0.5
TPM1-219ENST00000559397 KIF25-AS1Q9Y6Z4 181 aa11.93□□□□□ -0.5
TPM1-219ENST00000559397 LINC00315P59091 139 aa11.92□□□□□ -0.5
TPM1-219ENST00000559397 GAS8-AS1O95177 125 aa11.91□□□□□ -0.5
TPM1-219ENST00000559397 NCR2O95944 276 aa11.91□□□□□ -0.5
TPM1-219ENST00000559397 NPYP01303 97 aa11.91□□□□□ -0.5
TPM1-219ENST00000559397 LINC00614P0C842 121 aa11.91□□□□□ -0.5
TPM1-219ENST00000559397 SMIM6P0DI80 62 aa11.91□□□□□ -0.5
TPM1-219ENST00000559397 RNASEKQ6P5S7 137 aaKnown RBP11.91□□□□□ -0.5
TPM1-219ENST00000559397 C14orf178Q8N769 122 aaPredicted RBP11.91□□□□□ -0.5
TPM1-219ENST00000559397 SYT8Q8NBV8 401 aa11.91□□□□□ -0.5
TPM1-219ENST00000559397 PTH2Q96A98 100 aa11.91□□□□□ -0.5
TPM1-219ENST00000559397 MRAP2Q96G30 205 aa11.91□□□□□ -0.5
TPM1-219ENST00000559397 SPATA25Q9BR10 227 aa11.91□□□□□ -0.5
TPM1-219ENST00000559397 X6R8D5 127 aa11.91□□□□□ -0.5
TPM1-219ENST00000559397 IGHV3OR16-12A0A075B7B8 117 aa11.91□□□□□ -0.5
TPM1-219ENST00000559397 C11orf72Q8NBR9 251 aa11.91□□□□□ -0.5
TPM1-219ENST00000559397 SAMD10Q9BYL1 202 aa11.91□□□□□ -0.5
TPM1-219ENST00000559397 GSN-AS1Q9NRJ2 163 aa11.91□□□□□ -0.5
TPM1-219ENST00000559397 COL7A1Q02388 2944 aa11.9□□□□□ -0.5
TPM1-219ENST00000559397 HSBP1O75506 76 aa11.9□□□□□ -0.5
TPM1-219ENST00000559397 PRM2P04554 102 aa11.9□□□□□ -0.5
TPM1-219ENST00000559397 ZNF415Q09FC8 603 aa11.9□□□□□ -0.5
TPM1-219ENST00000559397 NRACQ8N912 160 aa11.9□□□□□ -0.5
TPM1-219ENST00000559397 OR11H2Q8NH07 326 aa11.9□□□□□ -0.5
TPM1-219ENST00000559397 TMEM208Q9BTX3 173 aa11.9□□□□□ -0.5
TPM1-219ENST00000559397 TNFRSF6BO95407 300 aa11.89□□□□□ -0.51
TPM1-219ENST00000559397 HTN1P15515 57 aa11.89□□□□□ -0.51
TPM1-219ENST00000559397 GATA1P15976 413 aaPredicted RBP11.89□□□□□ -0.51
TPM1-219ENST00000559397 AMTP48728 403 aa11.89□□□□□ -0.51
TPM1-219ENST00000559397 PYY3Q5JQD4 70 aa11.89□□□□□ -0.51
TPM1-219ENST00000559397 PIK3CD-AS1Q5SR53 167 aa11.89□□□□□ -0.51
TPM1-219ENST00000559397 JPT2Q9H910 190 aa11.89□□□□□ -0.51
TPM1-219ENST00000559397 PRSS47A8MTI9 375 aa11.88□□□□□ -0.51
TPM1-219ENST00000559397 PMCHP20382 165 aa11.88□□□□□ -0.51
TPM1-219ENST00000559397 FAM19A2Q8N3H0 131 aa11.88□□□□□ -0.51
TPM1-219ENST00000559397 NHLRC4P0CG21 123 aaPredicted RBP11.87□□□□□ -0.51
TPM1-219ENST00000559397 IFI27P40305 119 aaPredicted RBP11.87□□□□□ -0.51
TPM1-219ENST00000559397 ZNF876PQ49A33 203 aa11.87□□□□□ -0.51
TPM1-219ENST00000559397 PRSS3P2Q8NHM4 247 aa11.87□□□□□ -0.51
TPM1-219ENST00000559397 SPXQ9BT56 116 aa11.87□□□□□ -0.51
TPM1-219ENST00000559397 ZMAT4Q9H898 229 aa11.87□□□□□ -0.51
TPM1-219ENST00000559397 TENM3Q9P273 2699 aa11.87□□□□□ -0.51
TPM1-219ENST00000559397 TRAV26-2A0A0B4J265 109 aa11.87□□□□□ -0.51
TPM1-219ENST00000559397 M0R2P5 195 aa11.87□□□□□ -0.51
TPM1-219ENST00000559397 CRYGDP07320 174 aa11.87□□□□□ -0.51
TPM1-219ENST00000559397 SMIM17P0DL12 118 aa11.87□□□□□ -0.51
TPM1-219ENST00000559397 AZU1P20160 251 aa11.87□□□□□ -0.51
TPM1-219ENST00000559397 C12orf57Q99622 126 aa11.87□□□□□ -0.51
TPM1-219ENST00000559397 MAP1LC3AQ9H492 121 aa11.87□□□□□ -0.51
TPM1-219ENST00000559397 LOC389332A0A1B0GUA5 103 aa11.86□□□□□ -0.51
TPM1-219ENST00000559397 LINC01546A6NGU7 62 aa11.86□□□□□ -0.51
TPM1-219ENST00000559397 SMIM9A6NGZ8 99 aa11.86□□□□□ -0.51
TPM1-219ENST00000559397 JOSD1Q15040 202 aaPredicted RBP11.86□□□□□ -0.51
TPM1-219ENST00000559397 FA2HQ7L5A8 372 aa11.86□□□□□ -0.51
TPM1-219ENST00000559397 Q8NAQ8 132 aa11.86□□□□□ -0.51
TPM1-219ENST00000559397 IL17DQ8TAD2 202 aa11.86□□□□□ -0.51
TPM1-219ENST00000559397 AP5S1Q9NUS5 200 aa11.86□□□□□ -0.51
TPM1-219ENST00000559397 DNAH7Q8WXX0 4024 aa11.85□□□□□ -0.51
TPM1-219ENST00000559397 MGPP08493 103 aa11.85□□□□□ -0.51
TPM1-219ENST00000559397 MIFP14174 115 aa11.85□□□□□ -0.51
TPM1-219ENST00000559397 RRN3P1Q2M238 152 aa11.85□□□□□ -0.51
TPM1-219ENST00000559397 RNASE8Q8TDE3 154 aaKnown RBP11.85□□□□□ -0.51
TPM1-219ENST00000559397 RASL10AQ92737 203 aa11.85□□□□□ -0.51
TPM1-219ENST00000559397 IGLV2-18A0A075B6J9 118 aa11.84□□□□□ -0.51
TPM1-219ENST00000559397 IGHV1-24A0A0C4DH33 117 aa11.84□□□□□ -0.51
TPM1-219ENST00000559397 NXT2Q9NPJ8 142 aaKnown RBP11.84□□□□□ -0.51
TPM1-219ENST00000559397 A0A087WWL8 130 aa11.84□□□□□ -0.51
TPM1-219ENST00000559397 IGHV4-28A0A0C4DH34 117 aa11.84□□□□□ -0.51
TPM1-219ENST00000559397 TMEM263Q8WUH6 116 aaKnown RBP11.84□□□□□ -0.51
TPM1-219ENST00000559397 NDUFAF3Q9BU61 184 aa11.84□□□□□ -0.51
TPM1-219ENST00000559397 PLAC8L1A1L4L8 177 aa11.83□□□□□ -0.52
TPM1-219ENST00000559397 PPP1R17O96001 155 aa11.83□□□□□ -0.52
TPM1-219ENST00000559397 C20orf78Q9BR46 151 aa11.83□□□□□ -0.52
TPM1-219ENST00000559397 A8MWV9 139 aa11.82□□□□□ -0.52
TPM1-219ENST00000559397 PMCHL1Q16048 86 aa11.82□□□□□ -0.52
TPM1-219ENST00000559397 SUMO4Q6EEV6 95 aa11.82□□□□□ -0.52
TPM1-219ENST00000559397 Q8N8P6 123 aa11.82□□□□□ -0.52
TPM1-219ENST00000559397 C16orf74Q96GX8 76 aa11.82□□□□□ -0.52
TPM1-219ENST00000559397 UFSP1Q6NVU6 142 aa11.81□□□□□ -0.52
TPM1-219ENST00000559397 RPL39LQ96EH5 51 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 384.4 ms