RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 C1QBP02746 253 aa8.21□□□□□ -1.1
TPM1-216ENST00000558910 LINC00315P59091 139 aa8.21□□□□□ -1.1
TPM1-216ENST00000558910 GAGE1Q13065 139 aa8.21□□□□□ -1.1
TPM1-216ENST00000558910 GAGE4Q13068 117 aa8.21□□□□□ -1.1
TPM1-216ENST00000558910 GAGE5Q13069 117 aa8.21□□□□□ -1.1
TPM1-216ENST00000558910 GAGE13Q4V321 117 aa8.21□□□□□ -1.1
TPM1-216ENST00000558910 Q6ZSN1 163 aa8.21□□□□□ -1.1
TPM1-216ENST00000558910 PRADC1Q9BSG0 188 aa8.21□□□□□ -1.1
TPM1-216ENST00000558910 DERL1Q9BUN8 251 aa8.21□□□□□ -1.1
TPM1-216ENST00000558910 PHLDA3Q9Y5J5 127 aa8.21□□□□□ -1.1
TPM1-216ENST00000558910 A0A1B0GVG6 124 aa8.2□□□□□ -1.1
TPM1-216ENST00000558910 MGST1P10620 155 aaKnown RBP8.2□□□□□ -1.1
TPM1-216ENST00000558910 FUSP35637 526 aaKnown RBP eCLIP8.2□□□□□ -1.1
TPM1-216ENST00000558910 NKX2-5P52952 324 aaPredicted RBP8.2□□□□□ -1.1
TPM1-216ENST00000558910 EIF5AL1Q6IS14 154 aaKnown RBP8.2□□□□□ -1.1
TPM1-216ENST00000558910 RAB19A4D1S5 217 aa8.19□□□□□ -1.1
TPM1-216ENST00000558910 RPL35P42766 123 aaKnown RBP8.19□□□□□ -1.1
TPM1-216ENST00000558910 SULT1A2P50226 295 aa8.19□□□□□ -1.1
TPM1-216ENST00000558910 RHOHQ15669 191 aa8.19□□□□□ -1.1
TPM1-216ENST00000558910 ZNF674Q2M3X9 581 aa8.19□□□□□ -1.1
TPM1-216ENST00000558910 OR10J3Q5JRS4 329 aa8.19□□□□□ -1.1
TPM1-216ENST00000558910 SLC51BQ86UW2 128 aa8.19□□□□□ -1.1
TPM1-216ENST00000558910 C14orf178Q8N769 122 aaPredicted RBP8.19□□□□□ -1.1
TPM1-216ENST00000558910 TPPP3Q9BW30 176 aa8.19□□□□□ -1.1
TPM1-216ENST00000558910 PARLQ9H300 379 aa8.19□□□□□ -1.1
TPM1-216ENST00000558910 MANBALQ9NQG1 85 aa8.19□□□□□ -1.1
TPM1-216ENST00000558910 Q9UF83 564 aa8.19□□□□□ -1.1
TPM1-216ENST00000558910 LY96Q9Y6Y9 160 aa8.19□□□□□ -1.1
TPM1-216ENST00000558910 TEX46H3BTG2 121 aa8.18□□□□□ -1.1
TPM1-216ENST00000558910 IGHV3-30P01768 117 aa8.18□□□□□ -1.1
TPM1-216ENST00000558910 IGHV3-33P01772 117 aa8.18□□□□□ -1.1
TPM1-216ENST00000558910 IGHV3-30-3P0DP02 117 aa8.18□□□□□ -1.1
TPM1-216ENST00000558910 IGHV3-30-5P0DP03 117 aa8.18□□□□□ -1.1
TPM1-216ENST00000558910 ALKAL2Q6UX46 152 aa8.18□□□□□ -1.1
TPM1-216ENST00000558910 SPATA12Q7Z6I5 190 aa8.18□□□□□ -1.1
TPM1-216ENST00000558910 C9orf62Q8N4C0 152 aa8.18□□□□□ -1.1
TPM1-216ENST00000558910 TCEAL7Q9BRU2 100 aa8.18□□□□□ -1.1
TPM1-216ENST00000558910 IL36BQ9NZH7 164 aa8.18□□□□□ -1.1
TPM1-216ENST00000558910 TRBV6-1A0A0K0K1D8 114 aa8.17□□□□□ -1.1
TPM1-216ENST00000558910 A8MWV9 139 aa8.17□□□□□ -1.1
TPM1-216ENST00000558910 C16orf90A8MZG2 172 aa8.17□□□□□ -1.1
TPM1-216ENST00000558910 GZMBP10144 247 aa8.17□□□□□ -1.1
TPM1-216ENST00000558910 EVI2AP22794 236 aa8.17□□□□□ -1.1
TPM1-216ENST00000558910 RAB5CP51148 216 aa8.17□□□□□ -1.1
TPM1-216ENST00000558910 CENPWQ5EE01 88 aa8.17□□□□□ -1.1
TPM1-216ENST00000558910 ATP6V0E2Q8NHE4 81 aa8.17□□□□□ -1.1
TPM1-216ENST00000558910 MED9Q9NWA0 146 aa8.17□□□□□ -1.1
TPM1-216ENST00000558910 TRBV6-4A0A1B0GX49 114 aa8.16□□□□□ -1.1
TPM1-216ENST00000558910 A0A1W2PPQ1 181 aa8.16□□□□□ -1.1
TPM1-216ENST00000558910 IFNA1P01562 189 aa8.16□□□□□ -1.1
TPM1-216ENST00000558910 S100A9P06702 114 aaKnown RBP8.16□□□□□ -1.1
TPM1-216ENST00000558910 CRYGDP07320 174 aa8.16□□□□□ -1.1
TPM1-216ENST00000558910 CEBPGP53567 150 aa8.16□□□□□ -1.1
TPM1-216ENST00000558910 OR10AG1Q8NH19 301 aa8.16□□□□□ -1.1
TPM1-216ENST00000558910 Q9HAA7 133 aa8.16□□□□□ -1.1
TPM1-216ENST00000558910 TRAV9-2A0A087WT02 112 aa8.15□□□□□ -1.1
TPM1-216ENST00000558910 TRAV8-6A0A0B4J262 113 aa8.15□□□□□ -1.1
TPM1-216ENST00000558910 ZFP82Q8N141 532 aa8.15□□□□□ -1.1
TPM1-216ENST00000558910 DAZAP1Q96EP5 407 aaKnown RBP8.15□□□□□ -1.1
TPM1-216ENST00000558910 LRP1BQ9NZR2 4599 aa8.14□□□□□ -1.11
TPM1-216ENST00000558910 TRAV1-1A0A0B4J248 108 aa8.14□□□□□ -1.11
TPM1-216ENST00000558910 RBFOX3A6NFN3 312 aa8.14□□□□□ -1.11
TPM1-216ENST00000558910 DNAH10OSP0CZ25 163 aa8.14□□□□□ -1.11
TPM1-216ENST00000558910 BCL2P10415 239 aa8.14□□□□□ -1.11
TPM1-216ENST00000558910 GNG4P50150 75 aa8.14□□□□□ -1.11
TPM1-216ENST00000558910 KRTAP10-2P60368 255 aa8.14□□□□□ -1.11
TPM1-216ENST00000558910 MEF2BQ02080 365 aaPredicted RBP8.14□□□□□ -1.11
TPM1-216ENST00000558910 ZNF56Q15929 161 aa8.14□□□□□ -1.11
TPM1-216ENST00000558910 SPANXN1Q5VSR9 72 aa8.14□□□□□ -1.11
TPM1-216ENST00000558910 COX8CQ7Z4L0 72 aa8.14□□□□□ -1.11
TPM1-216ENST00000558910 PTH2Q96A98 100 aa8.14□□□□□ -1.11
TPM1-216ENST00000558910 IGHV3-38A0A0C4DH36 116 aa8.13□□□□□ -1.11
TPM1-216ENST00000558910 F5H697 171 aa8.13□□□□□ -1.11
TPM1-216ENST00000558910 ZFP2Q6ZN57 461 aa8.13□□□□□ -1.11
TPM1-216ENST00000558910 SH2D6Q7Z4S9 175 aa8.13□□□□□ -1.11
TPM1-216ENST00000558910 OR2D3Q8NGH3 330 aa8.13□□□□□ -1.11
TPM1-216ENST00000558910 SFRP2Q96HF1 295 aa8.13□□□□□ -1.11
TPM1-216ENST00000558910 MLST8Q9BVC4 326 aa8.13□□□□□ -1.11
TPM1-216ENST00000558910 KRTAP4-2Q9BYR5 136 aa8.13□□□□□ -1.11
TPM1-216ENST00000558910 GTSF1LQ9H1H1 148 aa8.13□□□□□ -1.11
TPM1-216ENST00000558910 MSRB1Q9NZV6 116 aa8.13□□□□□ -1.11
TPM1-216ENST00000558910 CIDEAO60543 219 aa8.12□□□□□ -1.11
TPM1-216ENST00000558910 DNLZQ5SXM8 178 aa8.12□□□□□ -1.11
TPM1-216ENST00000558910 UFSP1Q6NVU6 142 aa8.12□□□□□ -1.11
TPM1-216ENST00000558910 C11orf52Q96A22 123 aa8.12□□□□□ -1.11
TPM1-216ENST00000558910 KRTAP9-3Q9BYQ3 159 aa8.12□□□□□ -1.11
TPM1-216ENST00000558910 SCRT2Q9NQ03 307 aa8.12□□□□□ -1.11
TPM1-216ENST00000558910 VAX2Q9UIW0 290 aa8.12□□□□□ -1.11
TPM1-216ENST00000558910 DNAH5Q8TE73 4624 aa8.12□□□□□ -1.11
TPM1-216ENST00000558910 RHODO00212 210 aa8.11□□□□□ -1.11
TPM1-216ENST00000558910 PSCAO43653 123 aa8.11□□□□□ -1.11
TPM1-216ENST00000558910 PDE6DO43924 150 aa8.11□□□□□ -1.11
TPM1-216ENST00000558910 IGLV2-8P01709 118 aa8.11□□□□□ -1.11
TPM1-216ENST00000558910 MGPP08493 103 aa8.11□□□□□ -1.11
TPM1-216ENST00000558910 LELP1Q5T871 98 aa8.11□□□□□ -1.11
TPM1-216ENST00000558910 Q6ZRN7 208 aaPredicted RBP8.11□□□□□ -1.11
TPM1-216ENST00000558910 P01737 135 aa8.1□□□□□ -1.11
TPM1-216ENST00000558910 ERVFC1-1P60608 527 aa8.1□□□□□ -1.11
TPM1-216ENST00000558910 LCE5AQ5TCM9 118 aa8.1□□□□□ -1.11
TPM1-216ENST00000558910 DEFB104AQ8WTQ1 72 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms