RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 S100A2P29034 98 aa3.71□□□□□ -1.82
SMAD3-209ENST00000558894 GCHFRP30047 84 aa3.71□□□□□ -1.82
SMAD3-209ENST00000558894 CDC34P49427 236 aaPredicted RBP3.71□□□□□ -1.82
SMAD3-209ENST00000558894 CRIP1P50238 77 aa3.71□□□□□ -1.82
SMAD3-209ENST00000558894 RBX1P62877 108 aa3.71□□□□□ -1.82
SMAD3-209ENST00000558894 LGALSLQ3ZCW2 172 aaPredicted RBP3.71□□□□□ -1.82
SMAD3-209ENST00000558894 ZNF876PQ49A33 203 aa3.71□□□□□ -1.82
SMAD3-209ENST00000558894 LCE2AQ5TA79 106 aaPredicted RBP3.71□□□□□ -1.82
SMAD3-209ENST00000558894 LCE2CQ5TA81 110 aa3.71□□□□□ -1.82
SMAD3-209ENST00000558894 UFSP1Q6NVU6 142 aa3.71□□□□□ -1.82
SMAD3-209ENST00000558894 CDPF1Q6NVV7 123 aa3.71□□□□□ -1.82
SMAD3-209ENST00000558894 C5orf17Q8NAS9 161 aa3.71□□□□□ -1.82
SMAD3-209ENST00000558894 CMTM2Q8TAZ6 248 aa3.71□□□□□ -1.82
SMAD3-209ENST00000558894 KCNS1Q96KK3 526 aa3.71□□□□□ -1.82
SMAD3-209ENST00000558894 LINC00479Q96M42 142 aa3.71□□□□□ -1.82
SMAD3-209ENST00000558894 MSRB1Q9NZV6 116 aa3.71□□□□□ -1.82
SMAD3-209ENST00000558894 NAGKQ9UJ70 344 aa3.71□□□□□ -1.82
SMAD3-209ENST00000558894 EPDR1Q9UM22 224 aa3.71□□□□□ -1.82
SMAD3-209ENST00000558894 TNFSF18Q9UNG2 199 aa3.71□□□□□ -1.82
SMAD3-209ENST00000558894 PSG8Q9UQ74 426 aa3.71□□□□□ -1.82
SMAD3-209ENST00000558894 SERTM2A0A1B0GWG4 89 aa3.7□□□□□ -1.82
SMAD3-209ENST00000558894 TRBV6-4A0A1B0GX49 114 aa3.7□□□□□ -1.82
SMAD3-209ENST00000558894 A0A1W2PRE2 83 aa3.7□□□□□ -1.82
SMAD3-209ENST00000558894 HMSDA8MTL9 139 aa3.7□□□□□ -1.82
SMAD3-209ENST00000558894 IBA57-AS1B1ANH7 110 aa3.7□□□□□ -1.82
SMAD3-209ENST00000558894 C9JCJ5 164 aa3.7□□□□□ -1.82
SMAD3-209ENST00000558894 TMEM238C9JI98 176 aa3.7□□□□□ -1.82
SMAD3-209ENST00000558894 GCGP01275 180 aa3.7□□□□□ -1.82
SMAD3-209ENST00000558894 MT-ND4LP03901 98 aa3.7□□□□□ -1.82
SMAD3-209ENST00000558894 PFN1P07737 140 aaKnown RBP3.7□□□□□ -1.82
SMAD3-209ENST00000558894 ERVFC1-1P60608 527 aa3.7□□□□□ -1.82
SMAD3-209ENST00000558894 RPS20P60866 119 aaKnown RBP3.7□□□□□ -1.82
SMAD3-209ENST00000558894 SNRPEP62304 92 aaKnown RBP3.7□□□□□ -1.82
SMAD3-209ENST00000558894 SERF2P84101 59 aa3.7□□□□□ -1.82
SMAD3-209ENST00000558894 FABP9Q0Z7S8 132 aa3.7□□□□□ -1.82
SMAD3-209ENST00000558894 PEA15Q15121 130 aa3.7□□□□□ -1.82
SMAD3-209ENST00000558894 LINC01556Q5JQF7 62 aa3.7□□□□□ -1.82
SMAD3-209ENST00000558894 ZNF506Q5JVG8 444 aa3.7□□□□□ -1.82
SMAD3-209ENST00000558894 FAM74A1Q5RGS3 127 aa3.7□□□□□ -1.82
SMAD3-209ENST00000558894 RPL7L1Q6DKI1 246 aaKnown RBP3.7□□□□□ -1.82
SMAD3-209ENST00000558894 EIF5AL1Q6IS14 154 aaKnown RBP3.7□□□□□ -1.82
SMAD3-209ENST00000558894 COX8CQ7Z4L0 72 aa3.7□□□□□ -1.82
SMAD3-209ENST00000558894 NFE4Q86UQ8 179 aa3.7□□□□□ -1.82
SMAD3-209ENST00000558894 Q8N3U1 123 aa3.7□□□□□ -1.82
SMAD3-209ENST00000558894 SEC11CQ9BY50 192 aa3.7□□□□□ -1.82
SMAD3-209ENST00000558894 SDF2L1Q9HCN8 221 aa3.7□□□□□ -1.82
SMAD3-209ENST00000558894 SMCO4Q9NRQ5 59 aa3.7□□□□□ -1.82
SMAD3-209ENST00000558894 CYTL1Q9NRR1 136 aa3.7□□□□□ -1.82
SMAD3-209ENST00000558894 PKHD1L1Q86WI1 4243 aa3.7□□□□□ -1.82
SMAD3-209ENST00000558894 LRP1Q07954 4544 aaKnown RBP3.69□□□□□ -1.82
SMAD3-209ENST00000558894 FAT3Q8TDW7 4589 aa3.69□□□□□ -1.82
SMAD3-209ENST00000558894 TRAV9-2A0A087WT02 112 aa3.69□□□□□ -1.82
SMAD3-209ENST00000558894 IGHV3-73A0A0B4J1V6 119 aa3.69□□□□□ -1.82
SMAD3-209ENST00000558894 TRAV34A0A0B4J273 112 aa3.69□□□□□ -1.82
SMAD3-209ENST00000558894 IGHV3-38A0A0C4DH36 116 aa3.69□□□□□ -1.82
SMAD3-209ENST00000558894 FBLL1A6NHQ2 334 aaKnown RBP3.69□□□□□ -1.82
SMAD3-209ENST00000558894 M0R143 59 aa3.69□□□□□ -1.82
SMAD3-209ENST00000558894 TAAR5O14804 337 aa3.69□□□□□ -1.82
SMAD3-209ENST00000558894 CXorf1O96002 111 aa3.69□□□□□ -1.82
SMAD3-209ENST00000558894 CRYGDP07320 174 aa3.69□□□□□ -1.82
SMAD3-209ENST00000558894 GIPP09681 153 aaPredicted RBP3.69□□□□□ -1.82
SMAD3-209ENST00000558894 ZNF25P17030 456 aaPredicted RBP3.69□□□□□ -1.82
SMAD3-209ENST00000558894 EVI2AP22794 236 aa3.69□□□□□ -1.82
SMAD3-209ENST00000558894 WFDC2Q14508 124 aa3.69□□□□□ -1.82
SMAD3-209ENST00000558894 PRNTQ86SH4 94 aa3.69□□□□□ -1.82
SMAD3-209ENST00000558894 CYB561D1Q8N8Q1 229 aa3.69□□□□□ -1.82
SMAD3-209ENST00000558894 SMIM12Q96EX1 92 aa3.69□□□□□ -1.82
SMAD3-209ENST00000558894 TXNDC17Q9BRA2 123 aa3.69□□□□□ -1.82
SMAD3-209ENST00000558894 SAMD10Q9BYL1 202 aa3.69□□□□□ -1.82
SMAD3-209ENST00000558894 PARLQ9H300 379 aa3.69□□□□□ -1.82
SMAD3-209ENST00000558894 JPT2Q9H910 190 aa3.69□□□□□ -1.82
SMAD3-209ENST00000558894 TMEM167BQ9NRX6 74 aa3.69□□□□□ -1.82
SMAD3-209ENST00000558894 ARL2-SNX15V9GYD0 113 aa3.69□□□□□ -1.82
SMAD3-209ENST00000558894 EPM2AB3EWF7 344 aa3.68□□□□□ -1.82
SMAD3-209ENST00000558894 SCGB1A1P11684 91 aa3.68□□□□□ -1.82
SMAD3-209ENST00000558894 GCSHP23434 173 aa3.68□□□□□ -1.82
SMAD3-209ENST00000558894 RHOHQ15669 191 aa3.68□□□□□ -1.82
SMAD3-209ENST00000558894 CT83Q5H943 113 aa3.68□□□□□ -1.82
SMAD3-209ENST00000558894 PIK3CD-AS1Q5SR53 167 aa3.68□□□□□ -1.82
SMAD3-209ENST00000558894 LELP1Q5T871 98 aa3.68□□□□□ -1.82
SMAD3-209ENST00000558894 ATRAIDQ6UW56 229 aa3.68□□□□□ -1.82
SMAD3-209ENST00000558894 ZFP2Q6ZN57 461 aa3.68□□□□□ -1.82
SMAD3-209ENST00000558894 SH2D6Q7Z4S9 175 aa3.68□□□□□ -1.82
SMAD3-209ENST00000558894 Q86TA4 180 aa3.68□□□□□ -1.82
SMAD3-209ENST00000558894 Q8N814 137 aa3.68□□□□□ -1.82
SMAD3-209ENST00000558894 NHLRC2Q8NBF2 726 aa3.68□□□□□ -1.82
SMAD3-209ENST00000558894 PCNPQ8WW12 178 aaKnown RBP3.68□□□□□ -1.82
SMAD3-209ENST00000558894 ZC2HC1AQ96GY0 325 aa3.68□□□□□ -1.82
SMAD3-209ENST00000558894 ACTR3CQ9C0K3 210 aaPredicted RBP3.68□□□□□ -1.82
SMAD3-209ENST00000558894 FAM30AQ9NZY2 134 aa3.68□□□□□ -1.82
SMAD3-209ENST00000558894 CTXND1A0A1B0GTU2 59 aa3.67□□□□□ -1.82
SMAD3-209ENST00000558894 COLCA2A8K830 154 aa3.67□□□□□ -1.82
SMAD3-209ENST00000558894 FABP5P3A8MUU1 101 aa3.67□□□□□ -1.82
SMAD3-209ENST00000558894 IGHV3-30P01768 117 aa3.67□□□□□ -1.82
SMAD3-209ENST00000558894 IGHV3-33P01772 117 aa3.67□□□□□ -1.82
SMAD3-209ENST00000558894 SMR3BP02814 79 aaPredicted RBP3.67□□□□□ -1.82
SMAD3-209ENST00000558894 IGHV3-30-3P0DP02 117 aa3.67□□□□□ -1.82
SMAD3-209ENST00000558894 IGHV3-30-5P0DP03 117 aa3.67□□□□□ -1.82
SMAD3-209ENST00000558894 MGST1P10620 155 aaKnown RBP3.67□□□□□ -1.82
SMAD3-209ENST00000558894 FGF8P55075 233 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms