RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 C12orf74Q32Q52 190 aa11.77□□□□□ -0.53
AP4E1-202ENST00000558439 Q6ZS46 218 aa11.77□□□□□ -0.53
AP4E1-202ENST00000558439 C2orf91Q6ZV80 131 aa11.77□□□□□ -0.53
AP4E1-202ENST00000558439 ZNF462Q96JM2 2506 aa11.76□□□□□ -0.53
AP4E1-202ENST00000558439 IGHG2P01859 326 aa11.76□□□□□ -0.53
AP4E1-202ENST00000558439 PEMTQ9UBM1 199 aa11.76□□□□□ -0.53
AP4E1-202ENST00000558439 PRR9Q5T870 116 aa11.76□□□□□ -0.53
AP4E1-202ENST00000558439 GATD1Q8NB37 220 aa11.76□□□□□ -0.53
AP4E1-202ENST00000558439 CLPSL1A2RUU4 121 aa11.75□□□□□ -0.53
AP4E1-202ENST00000558439 DSCR9P59020 149 aa11.75□□□□□ -0.53
AP4E1-202ENST00000558439 RRN3P1Q2M238 152 aa11.75□□□□□ -0.53
AP4E1-202ENST00000558439 MEIG1Q5JSS6 88 aa11.75□□□□□ -0.53
AP4E1-202ENST00000558439 C10orf99Q6UWK7 81 aa11.75□□□□□ -0.53
AP4E1-202ENST00000558439 DMDP11532 3685 aa11.75□□□□□ -0.53
AP4E1-202ENST00000558439 IGHV3-38A0A0C4DH36 116 aa11.75□□□□□ -0.53
AP4E1-202ENST00000558439 XCL2Q9UBD3 114 aa11.75□□□□□ -0.53
AP4E1-202ENST00000558439 U3KQK5 164 aa11.75□□□□□ -0.53
AP4E1-202ENST00000558439 PRRC2AP48634 2157 aaKnown RBP11.75□□□□□ -0.53
AP4E1-202ENST00000558439 COX6CP09669 75 aa11.75□□□□□ -0.53
AP4E1-202ENST00000558439 STHQ8IWL8 128 aa11.75□□□□□ -0.53
AP4E1-202ENST00000558439 ADARB2-AS1A8MUL3 147 aa11.74□□□□□ -0.53
AP4E1-202ENST00000558439 SUMO4Q6EEV6 95 aa11.74□□□□□ -0.53
AP4E1-202ENST00000558439 KALRNO60229 2985 aa11.74□□□□□ -0.53
AP4E1-202ENST00000558439 A0A096LNJ9 63 aa11.74□□□□□ -0.53
AP4E1-202ENST00000558439 UBE2L6O14933 153 aa11.73□□□□□ -0.53
AP4E1-202ENST00000558439 HOXD3P31249 432 aaPredicted RBP11.73□□□□□ -0.53
AP4E1-202ENST00000558439 DMXL1Q9Y485 3027 aa11.73□□□□□ -0.53
AP4E1-202ENST00000558439 RPL13AP40429 203 aaKnown RBP11.73□□□□□ -0.53
AP4E1-202ENST00000558439 MDFICQ9P1T7 246 aa11.73□□□□□ -0.53
AP4E1-202ENST00000558439 TRPT1Q86TN4 253 aaKnown RBP11.73□□□□□ -0.53
AP4E1-202ENST00000558439 SH2D6Q7Z4S9 175 aa11.72□□□□□ -0.53
AP4E1-202ENST00000558439 TRGV1A0A0A0MS02 117 aa11.72□□□□□ -0.53
AP4E1-202ENST00000558439 FGF6P10767 208 aa11.72□□□□□ -0.53
AP4E1-202ENST00000558439 ZFAND2AQ8N6M9 145 aa11.72□□□□□ -0.53
AP4E1-202ENST00000558439 RASL10AQ92737 203 aa11.72□□□□□ -0.53
AP4E1-202ENST00000558439 FN1P02751 2386 aaKnown RBP11.72□□□□□ -0.53
AP4E1-202ENST00000558439 H3BUA1 57 aa11.72□□□□□ -0.53
AP4E1-202ENST00000558439 C19orf54Q5BKX5 351 aa11.72□□□□□ -0.53
AP4E1-202ENST00000558439 SIGMAR1Q99720 223 aa11.72□□□□□ -0.53
AP4E1-202ENST00000558439 TOMM7Q9P0U1 55 aa11.72□□□□□ -0.53
AP4E1-202ENST00000558439 EPG5Q9HCE0 2579 aa11.72□□□□□ -0.53
AP4E1-202ENST00000558439 TRGV2A0A075B6R0 118 aa11.71□□□□□ -0.53
AP4E1-202ENST00000558439 Q8N1Y9 231 aa11.71□□□□□ -0.53
AP4E1-202ENST00000558439 TACC2O95359 2948 aa11.71□□□□□ -0.53
AP4E1-202ENST00000558439 TEX48A0A1B0GUV7 120 aa11.71□□□□□ -0.53
AP4E1-202ENST00000558439 MAPKAPK5-AS1Q8N8E1 139 aa11.71□□□□□ -0.53
AP4E1-202ENST00000558439 DLX4Q92988 240 aaPredicted RBP11.71□□□□□ -0.53
AP4E1-202ENST00000558439 IGHG4P01861 327 aa11.71□□□□□ -0.54
AP4E1-202ENST00000558439 GATA3P23771 443 aa11.71□□□□□ -0.54
AP4E1-202ENST00000558439 CIRBPQ14011 172 aaKnown RBP11.71□□□□□ -0.54
AP4E1-202ENST00000558439 ZFP2Q6ZN57 461 aa11.71□□□□□ -0.54
AP4E1-202ENST00000558439 BAALCQ8WXS3 180 aa11.71□□□□□ -0.54
AP4E1-202ENST00000558439 ZNF625Q96I27 306 aaPredicted RBP11.71□□□□□ -0.54
AP4E1-202ENST00000558439 OPRPNQ99935 248 aaPredicted RBP11.71□□□□□ -0.54
AP4E1-202ENST00000558439 ERG28Q9UKR5 140 aa11.71□□□□□ -0.54
AP4E1-202ENST00000558439 A6NDX4 124 aa11.71□□□□□ -0.54
AP4E1-202ENST00000558439 SLURP1P55000 103 aa11.71□□□□□ -0.54
AP4E1-202ENST00000558439 ASPMQ8IZT6 3477 aa11.7□□□□□ -0.54
AP4E1-202ENST00000558439 IGLL5B9A064 214 aa11.7□□□□□ -0.54
AP4E1-202ENST00000558439 SRSF2Q01130 221 aaKnown RBP11.7□□□□□ -0.54
AP4E1-202ENST00000558439 WFDC2Q14508 124 aa11.7□□□□□ -0.54
AP4E1-202ENST00000558439 ACANP16112 2415 aa11.7□□□□□ -0.54
AP4E1-202ENST00000558439 HIST2H2BDQ6DRA6 164 aa11.69□□□□□ -0.54
AP4E1-202ENST00000558439 TSSC4Q9Y5U2 329 aaPredicted RBP11.69□□□□□ -0.54
AP4E1-202ENST00000558439 Q5PR19 223 aa11.69□□□□□ -0.54
AP4E1-202ENST00000558439 IGHV4OR15-8A0A075B7B6 117 aa11.69□□□□□ -0.54
AP4E1-202ENST00000558439 A0A087WW49 117 aa11.69□□□□□ -0.54
AP4E1-202ENST00000558439 I3L3M4 83 aa11.69□□□□□ -0.54
AP4E1-202ENST00000558439 J3QQQ9 107 aa11.69□□□□□ -0.54
AP4E1-202ENST00000558439 EDN2P20800 178 aa11.69□□□□□ -0.54
AP4E1-202ENST00000558439 C11orf86A6NJI1 115 aa11.68□□□□□ -0.54
AP4E1-202ENST00000558439 ZNF415Q09FC8 603 aa11.68□□□□□ -0.54
AP4E1-202ENST00000558439 A8MWV9 139 aa11.68□□□□□ -0.54
AP4E1-202ENST00000558439 TMEM141Q96I45 108 aa11.68□□□□□ -0.54
AP4E1-202ENST00000558439 APRG1Q8IVJ8 170 aa11.68□□□□□ -0.54
AP4E1-202ENST00000558439 TIMM21Q9BVV7 248 aa11.68□□□□□ -0.54
AP4E1-202ENST00000558439 YAE1D1Q9NRH1 226 aa11.68□□□□□ -0.54
AP4E1-202ENST00000558439 NRACQ8N912 160 aa11.68□□□□□ -0.54
AP4E1-202ENST00000558439 TOMM6Q96B49 74 aa11.68□□□□□ -0.54
AP4E1-202ENST00000558439 TRAV13-1A0A0B4J241 112 aa11.67□□□□□ -0.54
AP4E1-202ENST00000558439 Q96MF0 132 aa11.67□□□□□ -0.54
AP4E1-202ENST00000558439 JMJD1CQ15652 2540 aa11.67□□□□□ -0.54
AP4E1-202ENST00000558439 DOPEY1Q5JWR5 2465 aa11.67□□□□□ -0.54
AP4E1-202ENST00000558439 AGRNO00468 2067 aa11.67□□□□□ -0.54
AP4E1-202ENST00000558439 A0A0J9YXV3 536 aa11.67□□□□□ -0.54
AP4E1-202ENST00000558439 TMEM238C9JI98 176 aa11.67□□□□□ -0.54
AP4E1-202ENST00000558439 HIGD1BQ9P298 99 aa11.67□□□□□ -0.54
AP4E1-202ENST00000558439 VPREB3Q9UKI3 123 aa11.67□□□□□ -0.54
AP4E1-202ENST00000558439 RPL35AP18077 110 aaKnown RBP11.66□□□□□ -0.54
AP4E1-202ENST00000558439 PLEKHB2Q96CS7 222 aa11.66□□□□□ -0.54
AP4E1-202ENST00000558439 TAL2Q16559 108 aa11.66□□□□□ -0.54
AP4E1-202ENST00000558439 ATMQ13315 3056 aa11.66□□□□□ -0.54
AP4E1-202ENST00000558439 ATP6V0BQ99437 205 aa11.66□□□□□ -0.54
AP4E1-202ENST00000558439 ANKRD17O75179 2603 aaKnown RBP11.65□□□□□ -0.54
AP4E1-202ENST00000558439 RBX1P62877 108 aa11.65□□□□□ -0.54
AP4E1-202ENST00000558439 CFHR3Q02985 330 aa11.65□□□□□ -0.54
AP4E1-202ENST00000558439 COL27A1Q8IZC6 1860 aaPredicted RBP11.65□□□□□ -0.54
AP4E1-202ENST00000558439 C9JAW5 83 aa11.65□□□□□ -0.54
AP4E1-202ENST00000558439 AVPP01185 164 aa11.65□□□□□ -0.54
AP4E1-202ENST00000558439 LGALS1P09382 135 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms