RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 ATP6V1G1O75348 118 aa5.83□□□□□ -1.48
TPM1-213ENST00000558400 NXPH4O95158 308 aa5.83□□□□□ -1.48
TPM1-213ENST00000558400 OR5AL1P0C617 328 aa5.83□□□□□ -1.48
TPM1-213ENST00000558400 CENPWQ5EE01 88 aa5.83□□□□□ -1.48
TPM1-213ENST00000558400 PRR27Q6MZM9 219 aa5.83□□□□□ -1.48
TPM1-213ENST00000558400 SLC7A5P1Q8MH63 180 aa5.83□□□□□ -1.48
TPM1-213ENST00000558400 C6orf223Q8N319 242 aa5.83□□□□□ -1.48
TPM1-213ENST00000558400 SFRP2Q96HF1 295 aa5.83□□□□□ -1.48
TPM1-213ENST00000558400 DERL1Q9BUN8 251 aa5.83□□□□□ -1.48
TPM1-213ENST00000558400 IGHV3-73A0A0B4J1V6 119 aa5.82□□□□□ -1.48
TPM1-213ENST00000558400 TRAV8-6A0A0B4J262 113 aa5.82□□□□□ -1.48
TPM1-213ENST00000558400 RAB19A4D1S5 217 aa5.82□□□□□ -1.48
TPM1-213ENST00000558400 F2Z2F3 143 aa5.82□□□□□ -1.48
TPM1-213ENST00000558400 M0R381 172 aa5.82□□□□□ -1.48
TPM1-213ENST00000558400 RTL8CO15255 209 aa5.82□□□□□ -1.48
TPM1-213ENST00000558400 SNAI2O43623 268 aa5.82□□□□□ -1.48
TPM1-213ENST00000558400 IGLV2-8P01709 118 aa5.82□□□□□ -1.48
TPM1-213ENST00000558400 P01737 135 aa5.82□□□□□ -1.48
TPM1-213ENST00000558400 EVI2AP22794 236 aa5.82□□□□□ -1.48
TPM1-213ENST00000558400 SPANXN1Q5VSR9 72 aa5.82□□□□□ -1.48
TPM1-213ENST00000558400 ATP6V0E2Q8NHE4 81 aa5.82□□□□□ -1.48
TPM1-213ENST00000558400 LY96Q9Y6Y9 160 aa5.82□□□□□ -1.48
TPM1-213ENST00000558400 TRBV10-1A0A0K0K1A3 114 aa5.81□□□□□ -1.48
TPM1-213ENST00000558400 C19orf71A6NCJ1 209 aa5.81□□□□□ -1.48
TPM1-213ENST00000558400 FAM229AH3BQW9 127 aa5.81□□□□□ -1.48
TPM1-213ENST00000558400 CRYGDP07320 174 aa5.81□□□□□ -1.48
TPM1-213ENST00000558400 UFSP1Q6NVU6 142 aa5.81□□□□□ -1.48
TPM1-213ENST00000558400 NFE4Q86UQ8 179 aa5.81□□□□□ -1.48
TPM1-213ENST00000558400 C10orf126Q8N4M7 172 aa5.81□□□□□ -1.48
TPM1-213ENST00000558400 OR2D3Q8NGH3 330 aa5.81□□□□□ -1.48
TPM1-213ENST00000558400 EIF5A2Q9GZV4 153 aaKnown RBP5.81□□□□□ -1.48
TPM1-213ENST00000558400 GTSF1LQ9H1H1 148 aa5.81□□□□□ -1.48
TPM1-213ENST00000558400 JPT2Q9H910 190 aa5.81□□□□□ -1.48
TPM1-213ENST00000558400 PKHD1P08F94 4074 aa5.8□□□□□ -1.48
TPM1-213ENST00000558400 A0A087WWC5 75 aa5.8□□□□□ -1.48
TPM1-213ENST00000558400 IGHV3-38A0A0C4DH36 116 aa5.8□□□□□ -1.48
TPM1-213ENST00000558400 LOC100131303A0A0U1RQF7 123 aa5.8□□□□□ -1.48
TPM1-213ENST00000558400 DNAH10OSP0CZ25 163 aa5.8□□□□□ -1.48
TPM1-213ENST00000558400 SMIM17P0DL12 118 aa5.8□□□□□ -1.48
TPM1-213ENST00000558400 RAB4BP61018 213 aa5.8□□□□□ -1.48
TPM1-213ENST00000558400 CACNG7P62955 275 aa5.8□□□□□ -1.48
TPM1-213ENST00000558400 RPL19P84098 196 aaKnown RBP5.8□□□□□ -1.48
TPM1-213ENST00000558400 LELP1Q5T871 98 aa5.8□□□□□ -1.48
TPM1-213ENST00000558400 FAM74A4Q5TZK3 123 aa5.8□□□□□ -1.48
TPM1-213ENST00000558400 WDR73Q6P4I2 378 aa5.8□□□□□ -1.48
TPM1-213ENST00000558400 TEX261Q6UWH6 196 aa5.8□□□□□ -1.48
TPM1-213ENST00000558400 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.8□□□□□ -1.48
TPM1-213ENST00000558400 OCC1Q8TAD7 63 aa5.8□□□□□ -1.48
TPM1-213ENST00000558400 SAMD10Q9BYL1 202 aa5.8□□□□□ -1.48
TPM1-213ENST00000558400 TRBV20OR9-2A0A075B6H5 130 aa5.79□□□□□ -1.48
TPM1-213ENST00000558400 A0A087WWL8 130 aa5.79□□□□□ -1.48
TPM1-213ENST00000558400 RPL36AP83881 106 aaKnown RBP5.79□□□□□ -1.48
TPM1-213ENST00000558400 OR10J3Q5JRS4 329 aa5.79□□□□□ -1.48
TPM1-213ENST00000558400 Q6ZSN1 163 aa5.79□□□□□ -1.48
TPM1-213ENST00000558400 FER1L6-AS1Q8NA97 138 aa5.79□□□□□ -1.48
TPM1-213ENST00000558400 NUDT10Q8NFP7 164 aa5.79□□□□□ -1.48
TPM1-213ENST00000558400 OR10AG1Q8NH19 301 aa5.79□□□□□ -1.48
TPM1-213ENST00000558400 RPL36ALQ969Q0 106 aaKnown RBP5.79□□□□□ -1.48
TPM1-213ENST00000558400 NUDT11Q96G61 164 aa5.79□□□□□ -1.48
TPM1-213ENST00000558400 FAM210AQ96ND0 272 aa5.79□□□□□ -1.48
TPM1-213ENST00000558400 KRTAP4-5Q9BYR2 181 aa5.79□□□□□ -1.48
TPM1-213ENST00000558400 SMDT1Q9H4I9 107 aa5.79□□□□□ -1.48
TPM1-213ENST00000558400 TRBV7-3A0A075B6L6 115 aa5.78□□□□□ -1.48
TPM1-213ENST00000558400 GAGE12JA6NER3 117 aa5.78□□□□□ -1.48
TPM1-213ENST00000558400 F5H697 171 aa5.78□□□□□ -1.48
TPM1-213ENST00000558400 IGLC6P0CF74 106 aa5.78□□□□□ -1.48
TPM1-213ENST00000558400 GAGE1Q13065 139 aa5.78□□□□□ -1.48
TPM1-213ENST00000558400 GAGE4Q13068 117 aa5.78□□□□□ -1.48
TPM1-213ENST00000558400 GAGE5Q13069 117 aa5.78□□□□□ -1.48
TPM1-213ENST00000558400 GAGE13Q4V321 117 aa5.78□□□□□ -1.48
TPM1-213ENST00000558400 LINC01556Q5JQF7 62 aa5.78□□□□□ -1.48
TPM1-213ENST00000558400 TOR2AQ5JU69 321 aa5.78□□□□□ -1.48
TPM1-213ENST00000558400 C14orf178Q8N769 122 aaPredicted RBP5.78□□□□□ -1.48
TPM1-213ENST00000558400 AP1S3Q96PC3 154 aa5.78□□□□□ -1.48
TPM1-213ENST00000558400 A0A1B0GVY2 172 aa5.77□□□□□ -1.49
TPM1-213ENST00000558400 A8MWL6 223 aa5.77□□□□□ -1.49
TPM1-213ENST00000558400 H7C1H1 209 aa5.77□□□□□ -1.49
TPM1-213ENST00000558400 TRGC1P0CF51 173 aa5.77□□□□□ -1.49
TPM1-213ENST00000558400 CEBPGP53567 150 aa5.77□□□□□ -1.49
TPM1-213ENST00000558400 PEA15Q15121 130 aa5.77□□□□□ -1.49
TPM1-213ENST00000558400 FAM74A3Q4VXF1 159 aa5.77□□□□□ -1.49
TPM1-213ENST00000558400 FAM231DQ6ZW35 169 aa5.77□□□□□ -1.49
TPM1-213ENST00000558400 COMMD7Q86VX2 200 aa5.77□□□□□ -1.49
TPM1-213ENST00000558400 WFDC10BQ8IUB3 73 aa5.77□□□□□ -1.49
TPM1-213ENST00000558400 OR10G8Q8NGN5 311 aa5.77□□□□□ -1.49
TPM1-213ENST00000558400 SMIM7Q9BQ49 75 aa5.77□□□□□ -1.49
TPM1-213ENST00000558400 TPPP3Q9BW30 176 aa5.77□□□□□ -1.49
TPM1-213ENST00000558400 KRTAP4-8Q9BYQ9 185 aa5.77□□□□□ -1.49
TPM1-213ENST00000558400 KRTAP1-5Q9BYS1 174 aa5.77□□□□□ -1.49
TPM1-213ENST00000558400 RPP21Q9H633 154 aaKnown RBP5.77□□□□□ -1.49
TPM1-213ENST00000558400 DNAH6Q9C0G6 4158 aa5.77□□□□□ -1.49
TPM1-213ENST00000558400 ZNF727A8MUV8 499 aa5.76□□□□□ -1.49
TPM1-213ENST00000558400 EREGO14944 169 aa5.76□□□□□ -1.49
TPM1-213ENST00000558400 GATCO43716 136 aaKnown RBP5.76□□□□□ -1.49
TPM1-213ENST00000558400 LINC00694P0DN24 101 aa5.76□□□□□ -1.49
TPM1-213ENST00000558400 GZMBP10144 247 aa5.76□□□□□ -1.49
TPM1-213ENST00000558400 NTF3P20783 257 aa5.76□□□□□ -1.49
TPM1-213ENST00000558400 LINC00315P59091 139 aa5.76□□□□□ -1.49
TPM1-213ENST00000558400 ERVFC1-1P60608 527 aa5.76□□□□□ -1.49
TPM1-213ENST00000558400 RAB14P61106 215 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms