RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 TCF15Q12870 199 aa4.2□□□□□ -1.74
GABPB1-207ENST00000558335 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.2□□□□□ -1.74
GABPB1-207ENST00000558335 C5orf38Q86SI9 138 aa4.2□□□□□ -1.74
GABPB1-207ENST00000558335 ARL17AQ8IVW1 177 aa4.2□□□□□ -1.74
GABPB1-207ENST00000558335 UBE2WQ96B02 151 aa4.2□□□□□ -1.74
GABPB1-207ENST00000558335 TMEM141Q96I45 108 aa4.2□□□□□ -1.74
GABPB1-207ENST00000558335 C18orf15Q96N68 181 aa4.2□□□□□ -1.74
GABPB1-207ENST00000558335 TP73-AS1Q9UF72 201 aa4.2□□□□□ -1.74
GABPB1-207ENST00000558335 U3KQE9 123 aa4.2□□□□□ -1.74
GABPB1-207ENST00000558335 A0A096LNJ9 63 aa4.19□□□□□ -1.74
GABPB1-207ENST00000558335 LYNX1G3V0Z9 82 aa4.19□□□□□ -1.74
GABPB1-207ENST00000558335 K7EMT4 169 aa4.19□□□□□ -1.74
GABPB1-207ENST00000558335 IGF1P05019 195 aa4.19□□□□□ -1.74
GABPB1-207ENST00000558335 LYNX1P0DP58 116 aa4.19□□□□□ -1.74
GABPB1-207ENST00000558335 VPREB1P12018 145 aa4.19□□□□□ -1.74
GABPB1-207ENST00000558335 HIST1H4AP62805 103 aaKnown RBP4.19□□□□□ -1.74
GABPB1-207ENST00000558335 ZNF56Q15929 161 aa4.19□□□□□ -1.74
GABPB1-207ENST00000558335 ECSCRQ19T08 205 aa4.19□□□□□ -1.74
GABPB1-207ENST00000558335 LINC01620Q4KN68 170 aa4.19□□□□□ -1.74
GABPB1-207ENST00000558335 RUSC1-AS1Q66K80 236 aa4.19□□□□□ -1.74
GABPB1-207ENST00000558335 Q6ZQT7 251 aa4.19□□□□□ -1.74
GABPB1-207ENST00000558335 PCP2Q8IVA1 136 aa4.19□□□□□ -1.74
GABPB1-207ENST00000558335 RNF185Q96GF1 192 aa4.19□□□□□ -1.74
GABPB1-207ENST00000558335 FOXC2Q99958 501 aa4.19□□□□□ -1.74
GABPB1-207ENST00000558335 SMIM2Q9BVW6 85 aa4.19□□□□□ -1.74
GABPB1-207ENST00000558335 PHLDA3Q9Y5J5 127 aa4.19□□□□□ -1.74
GABPB1-207ENST00000558335 SMAD5-AS1Q9Y6J3 95 aa4.19□□□□□ -1.74
GABPB1-207ENST00000558335 TNRC18O15417 2968 aaPredicted RBP4.19□□□□□ -1.74
GABPB1-207ENST00000558335 SVILO95425 2214 aa4.18□□□□□ -1.74
GABPB1-207ENST00000558335 H3BVH4 76 aa4.18□□□□□ -1.74
GABPB1-207ENST00000558335 K7ERJ3 54 aa4.18□□□□□ -1.74
GABPB1-207ENST00000558335 ATP6V0E1O15342 81 aa4.18□□□□□ -1.74
GABPB1-207ENST00000558335 CD24P25063 80 aa4.18□□□□□ -1.74
GABPB1-207ENST00000558335 SAA4P35542 130 aa4.18□□□□□ -1.74
GABPB1-207ENST00000558335 DSCR9P59020 149 aa4.18□□□□□ -1.74
GABPB1-207ENST00000558335 SUMO2P61956 95 aaKnown RBP4.18□□□□□ -1.74
GABPB1-207ENST00000558335 SRSF9Q13242 221 aaKnown RBP eCLIP4.18□□□□□ -1.74
GABPB1-207ENST00000558335 ZC2HC1BQ5TFG8 222 aa4.18□□□□□ -1.74
GABPB1-207ENST00000558335 CLEC19AQ6UXS0 136 aa4.18□□□□□ -1.74
GABPB1-207ENST00000558335 NDUFA11Q86Y39 141 aa4.18□□□□□ -1.74
GABPB1-207ENST00000558335 DYNAPQ8N1N2 210 aa4.18□□□□□ -1.74
GABPB1-207ENST00000558335 C5orf56Q8N8D9 126 aa4.18□□□□□ -1.74
GABPB1-207ENST00000558335 TOMM6Q96B49 74 aa4.18□□□□□ -1.74
GABPB1-207ENST00000558335 C2orf48Q96LS8 159 aa4.18□□□□□ -1.74
GABPB1-207ENST00000558335 SCGB3A1Q96QR1 104 aa4.18□□□□□ -1.74
GABPB1-207ENST00000558335 HHLA3Q9XRX5 114 aa4.18□□□□□ -1.74
GABPB1-207ENST00000558335 SELENOKQ9Y6D0 94 aa4.18□□□□□ -1.74
GABPB1-207ENST00000558335 VCANP13611 3396 aa4.17□□□□□ -1.74
GABPB1-207ENST00000558335 OTOGLQ3ZCN5 2332 aa4.17□□□□□ -1.74
GABPB1-207ENST00000558335 IGLV2-18A0A075B6J9 118 aa4.17□□□□□ -1.74
GABPB1-207ENST00000558335 IGHV4OR15-8A0A075B7B6 117 aa4.17□□□□□ -1.74
GABPB1-207ENST00000558335 A0A087WW49 117 aa4.17□□□□□ -1.74
GABPB1-207ENST00000558335 A0A0B4J2C4 111 aa4.17□□□□□ -1.74
GABPB1-207ENST00000558335 KNCNA6PVL3 124 aa4.17□□□□□ -1.74
GABPB1-207ENST00000558335 VCYO14598 125 aa4.17□□□□□ -1.74
GABPB1-207ENST00000558335 TRGV3P03979 118 aa4.17□□□□□ -1.74
GABPB1-207ENST00000558335 COX6CP09669 75 aa4.17□□□□□ -1.74
GABPB1-207ENST00000558335 GATA1P15976 413 aaPredicted RBP4.17□□□□□ -1.74
GABPB1-207ENST00000558335 ZNF80P51504 273 aaPredicted RBP4.17□□□□□ -1.74
GABPB1-207ENST00000558335 SDIM1Q6ZPB5 146 aa4.17□□□□□ -1.74
GABPB1-207ENST00000558335 Q6ZRU5 148 aa4.17□□□□□ -1.74
GABPB1-207ENST00000558335 Q8TAT8 98 aa4.17□□□□□ -1.74
GABPB1-207ENST00000558335 PEMTQ9UBM1 199 aa4.17□□□□□ -1.74
GABPB1-207ENST00000558335 DKK2Q9UBU2 259 aa4.17□□□□□ -1.74
GABPB1-207ENST00000558335 PRO1854Q9UHT4 67 aa4.17□□□□□ -1.74
GABPB1-207ENST00000558335 LINC00527Q9UJ94 153 aa4.17□□□□□ -1.74
GABPB1-207ENST00000558335 NCOR1O75376 2440 aa4.16□□□□□ -1.74
GABPB1-207ENST00000558335 URB1O60287 2271 aaKnown RBP4.16□□□□□ -1.74
GABPB1-207ENST00000558335 ZNF318Q5VUA4 2279 aa4.16□□□□□ -1.74
GABPB1-207ENST00000558335 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.16□□□□□ -1.74
GABPB1-207ENST00000558335 TRAV26-2A0A0B4J265 109 aa4.16□□□□□ -1.74
GABPB1-207ENST00000558335 IGKV3D-20A0A0C4DH25 116 aa4.16□□□□□ -1.74
GABPB1-207ENST00000558335 IGHV7-4-1A0A0J9YVY3 117 aa4.16□□□□□ -1.74
GABPB1-207ENST00000558335 NDUFC1O43677 76 aa4.16□□□□□ -1.74
GABPB1-207ENST00000558335 NXPH4O95158 308 aa4.16□□□□□ -1.74
GABPB1-207ENST00000558335 TCL1BO95988 128 aa4.16□□□□□ -1.74
GABPB1-207ENST00000558335 IGHV1-69P01742 117 aa4.16□□□□□ -1.74
GABPB1-207ENST00000558335 ELANEP08246 267 aa4.16□□□□□ -1.74
GABPB1-207ENST00000558335 SNRPD3P62318 126 aaKnown RBP4.16□□□□□ -1.74
GABPB1-207ENST00000558335 ADORA2A-AS1P86434 159 aa4.16□□□□□ -1.74
GABPB1-207ENST00000558335 NDPQ00604 133 aa4.16□□□□□ -1.74
GABPB1-207ENST00000558335 RPL18AQ02543 176 aaKnown RBP4.16□□□□□ -1.74
GABPB1-207ENST00000558335 ERCC8Q13216 396 aa4.16□□□□□ -1.74
GABPB1-207ENST00000558335 MRPL55Q7Z7F7 128 aaKnown RBP4.16□□□□□ -1.74
GABPB1-207ENST00000558335 RNF182Q8N6D2 247 aa4.16□□□□□ -1.74
GABPB1-207ENST00000558335 NRACQ8N912 160 aa4.16□□□□□ -1.74
GABPB1-207ENST00000558335 NTN5Q8WTR8 489 aaPredicted RBP4.16□□□□□ -1.74
GABPB1-207ENST00000558335 ITLN2Q8WWU7 325 aaPredicted RBP4.16□□□□□ -1.74
GABPB1-207ENST00000558335 FAM19A4Q96LR4 140 aa4.16□□□□□ -1.74
GABPB1-207ENST00000558335 CCDC140Q96MF4 163 aa4.16□□□□□ -1.74
GABPB1-207ENST00000558335 TIMM17AQ99595 171 aa4.16□□□□□ -1.74
GABPB1-207ENST00000558335 RETNQ9HD89 108 aa4.16□□□□□ -1.74
GABPB1-207ENST00000558335 DAZ1Q9NQZ3 744 aaKnown RBP4.16□□□□□ -1.74
GABPB1-207ENST00000558335 ICE1Q9Y2F5 2266 aa4.16□□□□□ -1.74
GABPB1-207ENST00000558335 GPR179Q6PRD1 2367 aa4.16□□□□□ -1.74
GABPB1-207ENST00000558335 BDP1A6H8Y1 2624 aa4.15□□□□□ -1.74
GABPB1-207ENST00000558335 TRAV40A0A0B4J280 105 aa4.15□□□□□ -1.75
GABPB1-207ENST00000558335 TRBV7-6A0A0J9YX20 115 aa4.15□□□□□ -1.75
GABPB1-207ENST00000558335 TRBV6-5A0A0K0K1A5 114 aa4.15□□□□□ -1.75
GABPB1-207ENST00000558335 CLPSL1A2RUU4 121 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms