RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 COLCA2A8K830 154 aa8.87□□□□□ -0.99
TPM1-209ENST00000558072 SCO1O75880 301 aa8.87□□□□□ -0.99
TPM1-209ENST00000558072 GAGE7O76087 117 aa8.87□□□□□ -0.99
TPM1-209ENST00000558072 GAGE12FP0CL80 117 aa8.87□□□□□ -0.99
TPM1-209ENST00000558072 GAGE12GP0CL81 117 aa8.87□□□□□ -0.99
TPM1-209ENST00000558072 GAGE12IP0CL82 117 aa8.87□□□□□ -0.99
TPM1-209ENST00000558072 RAB5AP20339 215 aa8.87□□□□□ -0.99
TPM1-209ENST00000558072 SSTP61278 116 aa8.87□□□□□ -0.99
TPM1-209ENST00000558072 FAM104BQ5XKR9 115 aa8.87□□□□□ -0.99
TPM1-209ENST00000558072 Q6ZTI0 123 aa8.87□□□□□ -0.99
TPM1-209ENST00000558072 MRAP2Q96G30 205 aa8.87□□□□□ -0.99
TPM1-209ENST00000558072 TRAPPC1Q9Y5R8 145 aa8.87□□□□□ -0.99
TPM1-209ENST00000558072 DEFB4AO15263 64 aa8.86□□□□□ -0.99
TPM1-209ENST00000558072 APCSP02743 223 aa8.86□□□□□ -0.99
TPM1-209ENST00000558072 ATP5G1P05496 136 aa8.86□□□□□ -0.99
TPM1-209ENST00000558072 RPS10P46783 165 aaKnown RBP8.86□□□□□ -0.99
TPM1-209ENST00000558072 CFAP126Q5VTH2 177 aa8.86□□□□□ -0.99
TPM1-209ENST00000558072 TMEM136Q6ZRR5 245 aa8.86□□□□□ -0.99
TPM1-209ENST00000558072 C14orf178Q8N769 122 aaPredicted RBP8.86□□□□□ -0.99
TPM1-209ENST00000558072 LAMTOR2Q9Y2Q5 125 aa8.86□□□□□ -0.99
TPM1-209ENST00000558072 HUWE1Q7Z6Z7 4374 aaKnown RBP8.86□□□□□ -0.99
TPM1-209ENST00000558072 FBN3Q75N90 2809 aa8.85□□□□□ -0.99
TPM1-209ENST00000558072 F5H697 171 aa8.85□□□□□ -0.99
TPM1-209ENST00000558072 DEFB130BP0DP73 79 aa8.85□□□□□ -0.99
TPM1-209ENST00000558072 DEFB130AP0DP74 79 aa8.85□□□□□ -0.99
TPM1-209ENST00000558072 EVI2AP22794 236 aa8.85□□□□□ -0.99
TPM1-209ENST00000558072 FABP9Q0Z7S8 132 aa8.85□□□□□ -0.99
TPM1-209ENST00000558072 C11orf45Q8TAV5 145 aa8.85□□□□□ -0.99
TPM1-209ENST00000558072 MSRB1Q9NZV6 116 aa8.85□□□□□ -0.99
TPM1-209ENST00000558072 TRGV4A0A0C4DH28 118 aa8.84□□□□□ -0.99
TPM1-209ENST00000558072 A0A0J9YWU9 116 aa8.84□□□□□ -0.99
TPM1-209ENST00000558072 CRYGDP07320 174 aa8.84□□□□□ -0.99
TPM1-209ENST00000558072 CKS2P33552 79 aa8.84□□□□□ -0.99
TPM1-209ENST00000558072 ZNF56Q15929 161 aa8.84□□□□□ -0.99
TPM1-209ENST00000558072 FAM74A4Q5TZK3 123 aa8.84□□□□□ -0.99
TPM1-209ENST00000558072 POM121L12Q8N7R1 296 aa8.84□□□□□ -0.99
TPM1-209ENST00000558072 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.84□□□□□ -0.99
TPM1-209ENST00000558072 MUC4Q99102 2169 aa8.84□□□□□ -0.99
TPM1-209ENST00000558072 MRPL18Q9H0U6 180 aaKnown RBP8.84□□□□□ -0.99
TPM1-209ENST00000558072 EDA2RQ9HAV5 297 aa8.84□□□□□ -0.99
TPM1-209ENST00000558072 TRBV10-1A0A0K0K1A3 114 aa8.83□□□□□ -1
TPM1-209ENST00000558072 PHOX2AO14813 284 aa8.83□□□□□ -1
TPM1-209ENST00000558072 MGPP08493 103 aa8.83□□□□□ -1
TPM1-209ENST00000558072 RAB4AP20338 218 aa8.83□□□□□ -1
TPM1-209ENST00000558072 ORMDL3Q8N138 153 aa8.83□□□□□ -1
TPM1-209ENST00000558072 PRADC1Q9BSG0 188 aa8.83□□□□□ -1
TPM1-209ENST00000558072 KIF25-AS1Q9Y6Z4 181 aa8.83□□□□□ -1
TPM1-209ENST00000558072 U3KQK5 164 aa8.83□□□□□ -1
TPM1-209ENST00000558072 A0A087WWL8 130 aa8.82□□□□□ -1
TPM1-209ENST00000558072 TRBV6-4A0A1B0GX49 114 aa8.82□□□□□ -1
TPM1-209ENST00000558072 IGHV3-53P01767 116 aa8.82□□□□□ -1
TPM1-209ENST00000558072 AMN1Q8IY45 258 aa8.82□□□□□ -1
TPM1-209ENST00000558072 DNAJC30Q96LL9 226 aa8.82□□□□□ -1
TPM1-209ENST00000558072 PRO0255Q9UI72 69 aa8.82□□□□□ -1
TPM1-209ENST00000558072 C1orf196B1AJZ1 125 aa8.81□□□□□ -1
TPM1-209ENST00000558072 RHOHQ15669 191 aa8.81□□□□□ -1
TPM1-209ENST00000558072 UFSP1Q6NVU6 142 aa8.81□□□□□ -1
TPM1-209ENST00000558072 TENM3Q9P273 2699 aa8.8□□□□□ -1
TPM1-209ENST00000558072 TCAPO15273 167 aa8.8□□□□□ -1
TPM1-209ENST00000558072 LINC00315P59091 139 aa8.8□□□□□ -1
TPM1-209ENST00000558072 MRPL51Q4U2R6 128 aaKnown RBP8.8□□□□□ -1
TPM1-209ENST00000558072 SH2D6Q7Z4S9 175 aa8.8□□□□□ -1
TPM1-209ENST00000558072 RNF185Q96GF1 192 aa8.8□□□□□ -1
TPM1-209ENST00000558072 ZNF479Q96JC4 524 aa8.8□□□□□ -1
TPM1-209ENST00000558072 SAMD10Q9BYL1 202 aa8.8□□□□□ -1
TPM1-209ENST00000558072 JPT2Q9H910 190 aa8.8□□□□□ -1
TPM1-209ENST00000558072 NIT2Q9NQR4 276 aa8.8□□□□□ -1
TPM1-209ENST00000558072 HHLA3Q9XRX5 114 aa8.8□□□□□ -1
TPM1-209ENST00000558072 NBEAL2Q6ZNJ1 2754 aa8.79□□□□□ -1
TPM1-209ENST00000558072 TRAV10A0A0B4J240 114 aa8.79□□□□□ -1
TPM1-209ENST00000558072 H3BNG1 76 aa8.79□□□□□ -1
TPM1-209ENST00000558072 K7EQD1 137 aa8.79□□□□□ -1
TPM1-209ENST00000558072 TRGC2P03986 189 aa8.79□□□□□ -1
TPM1-209ENST00000558072 GATA1P15976 413 aaPredicted RBP8.79□□□□□ -1
TPM1-209ENST00000558072 RPL36AP83881 106 aaKnown RBP8.79□□□□□ -1
TPM1-209ENST00000558072 C12orf74Q32Q52 190 aa8.79□□□□□ -1
TPM1-209ENST00000558072 SUMO4Q6EEV6 95 aa8.79□□□□□ -1
TPM1-209ENST00000558072 RPL36ALQ969Q0 106 aaKnown RBP8.79□□□□□ -1
TPM1-209ENST00000558072 PRELID3AQ96N28 172 aa8.79□□□□□ -1
TPM1-209ENST00000558072 C20orf78Q9BR46 151 aa8.79□□□□□ -1
TPM1-209ENST00000558072 CELA1Q9UNI1 258 aa8.79□□□□□ -1
TPM1-209ENST00000558072 TNFRSF18Q9Y5U5 241 aa8.79□□□□□ -1
TPM1-209ENST00000558072 D6R8Y8 96 aa8.78□□□□□ -1
TPM1-209ENST00000558072 F5H768 121 aa8.78□□□□□ -1
TPM1-209ENST00000558072 RAB5BP61020 215 aa8.78□□□□□ -1
TPM1-209ENST00000558072 FHL2Q14192 279 aa8.78□□□□□ -1
TPM1-209ENST00000558072 OR10J3Q5JRS4 329 aa8.78□□□□□ -1
TPM1-209ENST00000558072 MAP1LC3AQ9H492 121 aa8.78□□□□□ -1
TPM1-209ENST00000558072 ST20Q9HBF5 79 aa8.78□□□□□ -1
TPM1-209ENST00000558072 IGHV3-73A0A0B4J1V6 119 aa8.77□□□□□ -1.01
TPM1-209ENST00000558072 TRBV6-5A0A0K0K1A5 114 aa8.77□□□□□ -1.01
TPM1-209ENST00000558072 K7EMI3 77 aa8.77□□□□□ -1.01
TPM1-209ENST00000558072 M0QY20 66 aa8.77□□□□□ -1.01
TPM1-209ENST00000558072 PAX4O43316 350 aa8.77□□□□□ -1.01
TPM1-209ENST00000558072 RPL32P62910 135 aaKnown RBP8.77□□□□□ -1.01
TPM1-209ENST00000558072 TMEM97Q5BJF2 176 aa8.77□□□□□ -1.01
TPM1-209ENST00000558072 DEFB131BA0A096LNP1 70 aa8.76□□□□□ -1.01
TPM1-209ENST00000558072 PRSS47A8MTI9 375 aa8.76□□□□□ -1.01
TPM1-209ENST00000558072 G0S2P27469 103 aa8.76□□□□□ -1.01
TPM1-209ENST00000558072 CRYBA4P53673 196 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms