RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 Q8NAQ8 132 aa7.56□□□□□ -1.2
GABRB3-213ENST00000557765 B9D2Q9BPU9 175 aa7.56□□□□□ -1.2
GABRB3-213ENST00000557765 KIF25-AS1Q9Y6Z4 181 aa7.56□□□□□ -1.2
GABRB3-213ENST00000557765 MGAM2Q2M2H8 2515 aa7.55□□□□□ -1.2
GABRB3-213ENST00000557765 TRBV6-5A0A0K0K1A5 114 aa7.55□□□□□ -1.2
GABRB3-213ENST00000557765 K7EIL1 84 aa7.55□□□□□ -1.2
GABRB3-213ENST00000557765 IGHV3-53P01767 116 aa7.55□□□□□ -1.2
GABRB3-213ENST00000557765 PMCHP20382 165 aa7.55□□□□□ -1.2
GABRB3-213ENST00000557765 EVI2AP22794 236 aa7.55□□□□□ -1.2
GABRB3-213ENST00000557765 COA6Q5JTJ3 125 aaKnown RBP7.55□□□□□ -1.2
GABRB3-213ENST00000557765 SH2D6Q7Z4S9 175 aa7.55□□□□□ -1.2
GABRB3-213ENST00000557765 OR4C5Q8NGB2 326 aa7.55□□□□□ -1.2
GABRB3-213ENST00000557765 PACRGQ96M98 296 aaPredicted RBP7.55□□□□□ -1.2
GABRB3-213ENST00000557765 NXT2Q9NPJ8 142 aaKnown RBP7.55□□□□□ -1.2
GABRB3-213ENST00000557765 TRGV2A0A075B6R0 118 aa7.54□□□□□ -1.2
GABRB3-213ENST00000557765 TRGV1A0A0A0MS02 117 aa7.54□□□□□ -1.2
GABRB3-213ENST00000557765 H3BNG1 76 aa7.54□□□□□ -1.2
GABRB3-213ENST00000557765 S100A6P06703 90 aa7.54□□□□□ -1.2
GABRB3-213ENST00000557765 CRYGDP07320 174 aa7.54□□□□□ -1.2
GABRB3-213ENST00000557765 PRB4P10163 310 aaPredicted RBP7.54□□□□□ -1.2
GABRB3-213ENST00000557765 TMEM97Q5BJF2 176 aa7.54□□□□□ -1.2
GABRB3-213ENST00000557765 CFAP126Q5VTH2 177 aa7.54□□□□□ -1.2
GABRB3-213ENST00000557765 Q6ZQT7 251 aa7.54□□□□□ -1.2
GABRB3-213ENST00000557765 CHCHD1Q96BP2 118 aaKnown RBP7.54□□□□□ -1.2
GABRB3-213ENST00000557765 ALKBH7Q9BT30 221 aaPredicted RBP7.54□□□□□ -1.2
GABRB3-213ENST00000557765 NOP10Q9NPE3 64 aaKnown RBP7.54□□□□□ -1.2
GABRB3-213ENST00000557765 DKK2Q9UBU2 259 aa7.54□□□□□ -1.2
GABRB3-213ENST00000557765 TRRAPQ9Y4A5 3859 aa7.53□□□□□ -1.2
GABRB3-213ENST00000557765 DEFB121Q5J5C9 76 aa7.53□□□□□ -1.2
GABRB3-213ENST00000557765 UFSP1Q6NVU6 142 aa7.53□□□□□ -1.2
GABRB3-213ENST00000557765 AMN1Q8IY45 258 aa7.53□□□□□ -1.2
GABRB3-213ENST00000557765 C14orf178Q8N769 122 aaPredicted RBP7.53□□□□□ -1.2
GABRB3-213ENST00000557765 MRAPQ8TCY5 172 aa7.53□□□□□ -1.2
GABRB3-213ENST00000557765 MAP1LC3AQ9H492 121 aa7.53□□□□□ -1.2
GABRB3-213ENST00000557765 NIT2Q9NQR4 276 aa7.53□□□□□ -1.2
GABRB3-213ENST00000557765 NBEAL1Q6ZS30 2694 aa7.53□□□□□ -1.2
GABRB3-213ENST00000557765 IGHV4-28A0A0C4DH34 117 aa7.52□□□□□ -1.21
GABRB3-213ENST00000557765 HIST1H2BKO60814 126 aa7.52□□□□□ -1.21
GABRB3-213ENST00000557765 ATP5G1P05496 136 aa7.52□□□□□ -1.21
GABRB3-213ENST00000557765 HIST1H2BJP06899 126 aa7.52□□□□□ -1.21
GABRB3-213ENST00000557765 ESDP10768 282 aa7.52□□□□□ -1.21
GABRB3-213ENST00000557765 HIST1H2BOP23527 126 aa7.52□□□□□ -1.21
GABRB3-213ENST00000557765 HIST1H2BBP33778 126 aa7.52□□□□□ -1.21
GABRB3-213ENST00000557765 HIST1H2BDP58876 126 aa7.52□□□□□ -1.21
GABRB3-213ENST00000557765 LINC00315P59091 139 aa7.52□□□□□ -1.21
GABRB3-213ENST00000557765 HIST1H2BCP62807 126 aa7.52□□□□□ -1.21
GABRB3-213ENST00000557765 SMAGPQ0VAQ4 97 aa7.52□□□□□ -1.21
GABRB3-213ENST00000557765 RHOHQ15669 191 aa7.52□□□□□ -1.21
GABRB3-213ENST00000557765 HIST2H2BEQ16778 126 aa7.52□□□□□ -1.21
GABRB3-213ENST00000557765 MRPL51Q4U2R6 128 aaKnown RBP7.52□□□□□ -1.21
GABRB3-213ENST00000557765 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.52□□□□□ -1.21
GABRB3-213ENST00000557765 HIST1H2BHQ93079 126 aa7.52□□□□□ -1.21
GABRB3-213ENST00000557765 RNF185Q96GF1 192 aa7.52□□□□□ -1.21
GABRB3-213ENST00000557765 PRELID3AQ96N28 172 aa7.52□□□□□ -1.21
GABRB3-213ENST00000557765 HIST1H2BNQ99877 126 aa7.52□□□□□ -1.21
GABRB3-213ENST00000557765 HIST1H2BMQ99879 126 aa7.52□□□□□ -1.21
GABRB3-213ENST00000557765 MSRB1Q9NZV6 116 aa7.52□□□□□ -1.21
GABRB3-213ENST00000557765 LINC01546A6NGU7 62 aa7.51□□□□□ -1.21
GABRB3-213ENST00000557765 F5H697 171 aa7.51□□□□□ -1.21
GABRB3-213ENST00000557765 SRIP30626 198 aa7.51□□□□□ -1.21
GABRB3-213ENST00000557765 AKR1D1P51857 326 aa7.51□□□□□ -1.21
GABRB3-213ENST00000557765 DAD1P61803 113 aa7.51□□□□□ -1.21
GABRB3-213ENST00000557765 SUMO2P61956 95 aaKnown RBP7.51□□□□□ -1.21
GABRB3-213ENST00000557765 ZNF56Q15929 161 aa7.51□□□□□ -1.21
GABRB3-213ENST00000557765 PRADC1Q9BSG0 188 aa7.51□□□□□ -1.21
GABRB3-213ENST00000557765 PRO0255Q9UI72 69 aa7.51□□□□□ -1.21
GABRB3-213ENST00000557765 D6R8Y8 96 aa7.5□□□□□ -1.21
GABRB3-213ENST00000557765 M0QY20 66 aa7.5□□□□□ -1.21
GABRB3-213ENST00000557765 VCYO14598 125 aa7.5□□□□□ -1.21
GABRB3-213ENST00000557765 TNFRSF6BO95407 300 aa7.5□□□□□ -1.21
GABRB3-213ENST00000557765 NCR2O95944 276 aa7.5□□□□□ -1.21
GABRB3-213ENST00000557765 NPSP0C0P6 89 aa7.5□□□□□ -1.21
GABRB3-213ENST00000557765 RPL36AP83881 106 aaKnown RBP7.5□□□□□ -1.21
GABRB3-213ENST00000557765 ORMDL2Q53FV1 153 aa7.5□□□□□ -1.21
GABRB3-213ENST00000557765 FAM222AQ5U5X8 452 aa7.5□□□□□ -1.21
GABRB3-213ENST00000557765 Q6ZTI0 123 aa7.5□□□□□ -1.21
GABRB3-213ENST00000557765 DAZ4Q86SG3 579 aaKnown RBP7.5□□□□□ -1.21
GABRB3-213ENST00000557765 SBSPONQ8IVN8 264 aa7.5□□□□□ -1.21
GABRB3-213ENST00000557765 RPL36ALQ969Q0 106 aaKnown RBP7.5□□□□□ -1.21
GABRB3-213ENST00000557765 KIR2DL4Q99706 377 aa7.5□□□□□ -1.21
GABRB3-213ENST00000557765 DAZ3Q9NR90 486 aaKnown RBP7.5□□□□□ -1.21
GABRB3-213ENST00000557765 TRAV26-1A0A087WT03 109 aa7.49□□□□□ -1.21
GABRB3-213ENST00000557765 TRBV27A0A0K0K1C4 114 aa7.49□□□□□ -1.21
GABRB3-213ENST00000557765 GATA1P15976 413 aaPredicted RBP7.49□□□□□ -1.21
GABRB3-213ENST00000557765 FAM74A4Q5TZK3 123 aa7.49□□□□□ -1.21
GABRB3-213ENST00000557765 BAGE3Q86Y29 109 aa7.49□□□□□ -1.21
GABRB3-213ENST00000557765 C18orf32Q8TCD1 76 aa7.49□□□□□ -1.21
GABRB3-213ENST00000557765 ST20Q9HBF5 79 aa7.49□□□□□ -1.21
GABRB3-213ENST00000557765 AP5S1Q9NUS5 200 aa7.49□□□□□ -1.21
GABRB3-213ENST00000557765 MRPL16Q9NX20 251 aaKnown RBP7.49□□□□□ -1.21
GABRB3-213ENST00000557765 TNFRSF18Q9Y5U5 241 aa7.49□□□□□ -1.21
GABRB3-213ENST00000557765 TRBV7-3A0A075B6L6 115 aa7.48□□□□□ -1.21
GABRB3-213ENST00000557765 TRGV4A0A0C4DH28 118 aa7.48□□□□□ -1.21
GABRB3-213ENST00000557765 GAGE12BA1L429 117 aa7.48□□□□□ -1.21
GABRB3-213ENST00000557765 K7EQD1 137 aa7.48□□□□□ -1.21
GABRB3-213ENST00000557765 GAGE7O76087 117 aa7.48□□□□□ -1.21
GABRB3-213ENST00000557765 MGPP08493 103 aa7.48□□□□□ -1.21
GABRB3-213ENST00000557765 LINC00614P0C842 121 aa7.48□□□□□ -1.21
GABRB3-213ENST00000557765 GAGE12FP0CL80 117 aa7.48□□□□□ -1.21
GABRB3-213ENST00000557765 GAGE12GP0CL81 117 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms