RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.73□□□□□ -2.29
GPHN-216ENST00000557678 TMEM141Q96I45 108 aa0.73□□□□□ -2.29
GPHN-216ENST00000557678 NAA60Q9H7X0 242 aa0.73□□□□□ -2.29
GPHN-216ENST00000557678 TMEM242Q9NWH2 141 aa0.73□□□□□ -2.29
GPHN-216ENST00000557678 NDUFA12Q9UI09 145 aa0.73□□□□□ -2.29
GPHN-216ENST00000557678 MED12Q93074 2177 aa0.73□□□□□ -2.29
GPHN-216ENST00000557678 PARP14Q460N5 1801 aa0.73□□□□□ -2.29
GPHN-216ENST00000557678 PTPRMP28827 1452 aa0.73□□□□□ -2.29
GPHN-216ENST00000557678 ZNF518AQ6AHZ1 1483 aa0.73□□□□□ -2.29
GPHN-216ENST00000557678 BCORL1Q5H9F3 1711 aa0.72□□□□□ -2.29
GPHN-216ENST00000557678 NWD2Q9ULI1 1742 aa0.72□□□□□ -2.29
GPHN-216ENST00000557678 PLXNA1Q9UIW2 1896 aa0.72□□□□□ -2.29
GPHN-216ENST00000557678 TRBV30A0A0K0K1B3 111 aa0.72□□□□□ -2.29
GPHN-216ENST00000557678 A0A1W2PPM0 123 aa0.72□□□□□ -2.29
GPHN-216ENST00000557678 TCRBV3S1A0A5B6 114 aa0.72□□□□□ -2.29
GPHN-216ENST00000557678 SNCGO76070 127 aa0.72□□□□□ -2.29
GPHN-216ENST00000557678 PIRTP0C851 137 aa0.72□□□□□ -2.29
GPHN-216ENST00000557678 EFNA4P52798 201 aa0.72□□□□□ -2.29
GPHN-216ENST00000557678 FXYD6P3P58550 94 aa0.72□□□□□ -2.29
GPHN-216ENST00000557678 FXYD3Q14802 87 aa0.72□□□□□ -2.29
GPHN-216ENST00000557678 CYP2G1PQ6ZSU1 146 aa0.72□□□□□ -2.29
GPHN-216ENST00000557678 C2orf88Q9BSF0 95 aa0.72□□□□□ -2.29
GPHN-216ENST00000557678 SPANXDQ9BXN6 97 aa0.72□□□□□ -2.29
GPHN-216ENST00000557678 RPRMQ9NS64 109 aa0.72□□□□□ -2.29
GPHN-216ENST00000557678 COA4Q9NYJ1 87 aa0.72□□□□□ -2.29
GPHN-216ENST00000557678 ROS1P08922 2347 aa0.72□□□□□ -2.29
GPHN-216ENST00000557678 CNTRLQ7Z7A1 2325 aa0.72□□□□□ -2.29
GPHN-216ENST00000557678 MBD5Q9P267 1494 aa0.72□□□□□ -2.29
GPHN-216ENST00000557678 CUL7Q14999 1698 aa0.72□□□□□ -2.29
GPHN-216ENST00000557678 CITO14578 2027 aa0.71□□□□□ -2.3
GPHN-216ENST00000557678 A0A1B0GV90 55 aa0.71□□□□□ -2.3
GPHN-216ENST00000557678 PITX3O75364 302 aa0.71□□□□□ -2.3
GPHN-216ENST00000557678 IFNGP01579 166 aa0.71□□□□□ -2.3
GPHN-216ENST00000557678 AKAIN1P0CW23 69 aa0.71□□□□□ -2.3
GPHN-216ENST00000557678 CBLN1P23435 193 aa0.71□□□□□ -2.3
GPHN-216ENST00000557678 KLKP1Q107X0 134 aa0.71□□□□□ -2.3
GPHN-216ENST00000557678 MEIG1Q5JSS6 88 aa0.71□□□□□ -2.3
GPHN-216ENST00000557678 C4orf33Q8N1A6 199 aa0.71□□□□□ -2.3
GPHN-216ENST00000557678 CCL19Q99731 98 aa0.71□□□□□ -2.3
GPHN-216ENST00000557678 SERP1Q9Y6X1 66 aa0.71□□□□□ -2.3
GPHN-216ENST00000557678 MAP2P11137 1827 aaKnown RBP0.71□□□□□ -2.3
GPHN-216ENST00000557678 KTN1Q86UP2 1357 aaKnown RBP0.7□□□□□ -2.3
GPHN-216ENST00000557678 NRXN2Q9P2S2 1712 aa0.7□□□□□ -2.3
GPHN-216ENST00000557678 ESPL1Q14674 2120 aa0.7□□□□□ -2.3
GPHN-216ENST00000557678 A2ML1A8K2U0 1454 aa0.7□□□□□ -2.3
GPHN-216ENST00000557678 MYOM2P54296 1465 aa0.7□□□□□ -2.3
GPHN-216ENST00000557678 NBDYA0A0U1RRE5 68 aa0.7□□□□□ -2.3
GPHN-216ENST00000557678 LOC101927531A0A1B0GV80 90 aa0.7□□□□□ -2.3
GPHN-216ENST00000557678 MCRIP1C9JLW8 97 aa0.7□□□□□ -2.3
GPHN-216ENST00000557678 FXYD1O00168 92 aa0.7□□□□□ -2.3
GPHN-216ENST00000557678 ZNF56Q15929 161 aa0.7□□□□□ -2.3
GPHN-216ENST00000557678 SPINK13Q1W4C9 94 aa0.7□□□□□ -2.3
GPHN-216ENST00000557678 Q56UQ5 140 aa0.7□□□□□ -2.3
GPHN-216ENST00000557678 C9orf116Q5BN46 136 aaPredicted RBP0.7□□□□□ -2.3
GPHN-216ENST00000557678 Q6AWC8 147 aa0.7□□□□□ -2.3
GPHN-216ENST00000557678 Q86TA4 180 aa0.7□□□□□ -2.3
GPHN-216ENST00000557678 C5orf56Q8N8D9 126 aa0.7□□□□□ -2.3
GPHN-216ENST00000557678 TSKUQ8WUA8 353 aa0.7□□□□□ -2.3
GPHN-216ENST00000557678 PP6455Q8WZ26 134 aa0.7□□□□□ -2.3
GPHN-216ENST00000557678 IFI27L1Q96BM0 104 aa0.7□□□□□ -2.3
GPHN-216ENST00000557678 CGREF1Q99674 301 aa0.7□□□□□ -2.3
GPHN-216ENST00000557678 SEC11CQ9BY50 192 aa0.7□□□□□ -2.3
GPHN-216ENST00000557678 AGPAT4-IT1Q9H0P7 198 aa0.7□□□□□ -2.3
GPHN-216ENST00000557678 BET1LQ9NYM9 111 aa0.7□□□□□ -2.3
GPHN-216ENST00000557678 GNG8Q9UK08 70 aa0.7□□□□□ -2.3
GPHN-216ENST00000557678 MUC22E2RYF6 1773 aaPredicted RBP0.7□□□□□ -2.3
GPHN-216ENST00000557678 MAPKBP1O60336 1514 aa0.69□□□□□ -2.3
GPHN-216ENST00000557678 LAMA4Q16363 1823 aa0.69□□□□□ -2.3
GPHN-216ENST00000557678 IFT140Q96RY7 1462 aa0.69□□□□□ -2.3
GPHN-216ENST00000557678 LRRC37A3O60309 1634 aa0.69□□□□□ -2.3
GPHN-216ENST00000557678 TRAV12-3A0A0B4J271 114 aa0.69□□□□□ -2.3
GPHN-216ENST00000557678 TRBV10-3A0A0K0K1G6 114 aa0.69□□□□□ -2.3
GPHN-216ENST00000557678 RBAKDNA6NC62 111 aa0.69□□□□□ -2.3
GPHN-216ENST00000557678 APOC4-APOC2K7ER74 178 aa0.69□□□□□ -2.3
GPHN-216ENST00000557678 TNFP01375 233 aa0.69□□□□□ -2.3
GPHN-216ENST00000557678 APOC2P02655 101 aa0.69□□□□□ -2.3
GPHN-216ENST00000557678 PRB4P10163 310 aaPredicted RBP0.69□□□□□ -2.3
GPHN-216ENST00000557678 HIST1H1DP16402 221 aaKnown RBP0.69□□□□□ -2.3
GPHN-216ENST00000557678 GNG4P50150 75 aa0.69□□□□□ -2.3
GPHN-216ENST00000557678 SSBP1Q04837 148 aaKnown RBP0.69□□□□□ -2.3
GPHN-216ENST00000557678 FAM74A4Q5TZK3 123 aa0.69□□□□□ -2.3
GPHN-216ENST00000557678 DSCR8Q96T75 97 aa0.69□□□□□ -2.3
GPHN-216ENST00000557678 TMEM14BQ9NUH8 114 aa0.69□□□□□ -2.3
GPHN-216ENST00000557678 ABCA4P78363 2273 aa0.69□□□□□ -2.3
GPHN-216ENST00000557678 MYH8P13535 1937 aa0.69□□□□□ -2.3
GPHN-216ENST00000557678 QRICH2Q9H0J4 1663 aa0.69□□□□□ -2.3
GPHN-216ENST00000557678 PHIPQ8WWQ0 1821 aa0.68□□□□□ -2.3
GPHN-216ENST00000557678 TCHHQ07283 1943 aa0.68□□□□□ -2.3
GPHN-216ENST00000557678 AHNAK2Q8IVF2 5795 aa0.68□□□□□ -2.3
GPHN-216ENST00000557678 MIF4GDA9UHW6 222 aaKnown RBP0.68□□□□□ -2.3
GPHN-216ENST00000557678 LINC00587B1AMM8 73 aa0.68□□□□□ -2.3
GPHN-216ENST00000557678 F6UZH7 168 aa0.68□□□□□ -2.3
GPHN-216ENST00000557678 TPPP2P59282 170 aa0.68□□□□□ -2.3
GPHN-216ENST00000557678 UBE2G1P62253 170 aa0.68□□□□□ -2.3
GPHN-216ENST00000557678 CCL8P80075 99 aa0.68□□□□□ -2.3
GPHN-216ENST00000557678 ZNF818PQ6ZRF7 136 aa0.68□□□□□ -2.3
GPHN-216ENST00000557678 PPP3R2Q96LZ3 170 aa0.68□□□□□ -2.3
GPHN-216ENST00000557678 DOCK2Q92608 1830 aa0.68□□□□□ -2.3
GPHN-216ENST00000557678 NRKQ7Z2Y5 1582 aa0.67□□□□□ -2.3
GPHN-216ENST00000557678 PATJQ8NI35 1801 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms