RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 OR1N2Q8NGR9 330 aa11.54□□□□□ -0.56
TMEM55B-207ENST00000557041 U3KQK5 164 aa11.54□□□□□ -0.56
TMEM55B-207ENST00000557041 APOMO95445 188 aa11.53□□□□□ -0.56
TMEM55B-207ENST00000557041 SMIM13P0DJ93 91 aa11.53□□□□□ -0.56
TMEM55B-207ENST00000557041 HSD52Q0P140 79 aa11.53□□□□□ -0.56
TMEM55B-207ENST00000557041 SPCS1Q9Y6A9 102 aa11.53□□□□□ -0.56
TMEM55B-207ENST00000557041 CDKN1BP46527 198 aa11.53□□□□□ -0.56
TMEM55B-207ENST00000557041 GTF2H5Q6ZYL4 71 aa11.53□□□□□ -0.56
TMEM55B-207ENST00000557041 RASL10AQ92737 203 aa11.52□□□□□ -0.56
TMEM55B-207ENST00000557041 YAE1D1Q9NRH1 226 aa11.52□□□□□ -0.56
TMEM55B-207ENST00000557041 FABP2P12104 132 aa11.52□□□□□ -0.57
TMEM55B-207ENST00000557041 DEFB125Q8N687 156 aa11.52□□□□□ -0.57
TMEM55B-207ENST00000557041 MRAP2Q96G30 205 aa11.52□□□□□ -0.57
TMEM55B-207ENST00000557041 LOC107984156A0A0G2JMH3 177 aa11.52□□□□□ -0.57
TMEM55B-207ENST00000557041 ZNF815PA8K554 130 aa11.52□□□□□ -0.57
TMEM55B-207ENST00000557041 IGHV3-53P01767 116 aa11.52□□□□□ -0.57
TMEM55B-207ENST00000557041 ARL17AQ8IVW1 177 aa11.52□□□□□ -0.57
TMEM55B-207ENST00000557041 PHLDA1Q8WV24 401 aaPredicted RBP11.52□□□□□ -0.57
TMEM55B-207ENST00000557041 OPRPNQ99935 248 aaPredicted RBP11.52□□□□□ -0.57
TMEM55B-207ENST00000557041 H3BUA1 57 aa11.51□□□□□ -0.57
TMEM55B-207ENST00000557041 H7C1H1 209 aa11.51□□□□□ -0.57
TMEM55B-207ENST00000557041 C2orf91Q6ZV80 131 aa11.51□□□□□ -0.57
TMEM55B-207ENST00000557041 OR9G4Q8NGQ1 327 aa11.51□□□□□ -0.57
TMEM55B-207ENST00000557041 IGHV3-38A0A0C4DH36 116 aa11.51□□□□□ -0.57
TMEM55B-207ENST00000557041 PRSS29PA6NIE9 313 aa11.51□□□□□ -0.57
TMEM55B-207ENST00000557041 RNASE3P12724 160 aaKnown RBP11.51□□□□□ -0.57
TMEM55B-207ENST00000557041 FXYD2P54710 66 aa11.51□□□□□ -0.57
TMEM55B-207ENST00000557041 NRACQ8N912 160 aa11.51□□□□□ -0.57
TMEM55B-207ENST00000557041 NBEAL2Q6ZNJ1 2754 aa11.5□□□□□ -0.57
TMEM55B-207ENST00000557041 TRBV25-1A0A075B6N4 114 aa11.5□□□□□ -0.57
TMEM55B-207ENST00000557041 PSMB8P28062 276 aa11.5□□□□□ -0.57
TMEM55B-207ENST00000557041 SEC11AP67812 179 aa11.5□□□□□ -0.57
TMEM55B-207ENST00000557041 SUMO4Q6EEV6 95 aa11.5□□□□□ -0.57
TMEM55B-207ENST00000557041 ZNF843Q8N446 348 aa11.5□□□□□ -0.57
TMEM55B-207ENST00000557041 WFDC11Q8NEX6 87 aa11.5□□□□□ -0.57
TMEM55B-207ENST00000557041 IGHV1OR15-1A0A075B7D0 117 aa11.5□□□□□ -0.57
TMEM55B-207ENST00000557041 GAGE12BA1L429 117 aa11.5□□□□□ -0.57
TMEM55B-207ENST00000557041 DGAT2L7PQ6IED9 249 aa11.5□□□□□ -0.57
TMEM55B-207ENST00000557041 RNASE8Q8TDE3 154 aaKnown RBP11.5□□□□□ -0.57
TMEM55B-207ENST00000557041 LENEPQ9Y5L5 61 aa11.5□□□□□ -0.57
TMEM55B-207ENST00000557041 IGLV1-40P01703 118 aa11.5□□□□□ -0.57
TMEM55B-207ENST00000557041 RIPPLY3P57055 190 aa11.5□□□□□ -0.57
TMEM55B-207ENST00000557041 DEFB113Q30KQ7 82 aa11.5□□□□□ -0.57
TMEM55B-207ENST00000557041 P0DMU3 169 aa11.49□□□□□ -0.57
TMEM55B-207ENST00000557041 FAM231AP0DMU4 169 aa11.49□□□□□ -0.57
TMEM55B-207ENST00000557041 FAM231CP0DMU5 169 aa11.49□□□□□ -0.57
TMEM55B-207ENST00000557041 PRSS2P07478 247 aa11.49□□□□□ -0.57
TMEM55B-207ENST00000557041 LGALS1P09382 135 aaKnown RBP11.49□□□□□ -0.57
TMEM55B-207ENST00000557041 GAGE1Q13065 139 aa11.49□□□□□ -0.57
TMEM55B-207ENST00000557041 CBY1Q9Y3M2 126 aa11.49□□□□□ -0.57
TMEM55B-207ENST00000557041 APCP25054 2843 aa11.49□□□□□ -0.57
TMEM55B-207ENST00000557041 BOD1L2Q8IYS8 172 aa11.48□□□□□ -0.57
TMEM55B-207ENST00000557041 TMEM61Q8N0U2 210 aa11.48□□□□□ -0.57
TMEM55B-207ENST00000557041 IGHV4-31P0DP07 118 aa11.48□□□□□ -0.57
TMEM55B-207ENST00000557041 HERVK_113P61574 105 aa11.48□□□□□ -0.57
TMEM55B-207ENST00000557041 RAX2Q96IS3 184 aa11.48□□□□□ -0.57
TMEM55B-207ENST00000557041 TNFRSF18Q9Y5U5 241 aa11.48□□□□□ -0.57
TMEM55B-207ENST00000557041 A0A087WX48 190 aa11.48□□□□□ -0.57
TMEM55B-207ENST00000557041 F8VRH5 84 aa11.48□□□□□ -0.57
TMEM55B-207ENST00000557041 VCYO14598 125 aa11.47□□□□□ -0.57
TMEM55B-207ENST00000557041 NSUN5P1Q3KNT7 163 aa11.47□□□□□ -0.57
TMEM55B-207ENST00000557041 SAMD5Q5TGI4 173 aa11.47□□□□□ -0.57
TMEM55B-207ENST00000557041 PRADC1Q9BSG0 188 aa11.47□□□□□ -0.57
TMEM55B-207ENST00000557041 NIPBLQ6KC79 2804 aaeCLIP11.47□□□□□ -0.57
TMEM55B-207ENST00000557041 IGKV3OR2-268A0A0C4DH90 116 aa11.47□□□□□ -0.57
TMEM55B-207ENST00000557041 SCGB1C2P0DMR2 95 aa11.47□□□□□ -0.57
TMEM55B-207ENST00000557041 MAPKAPK5-AS1Q8N8E1 139 aa11.47□□□□□ -0.57
TMEM55B-207ENST00000557041 DCANP1Q8TF63 244 aa11.47□□□□□ -0.57
TMEM55B-207ENST00000557041 CNFNQ9BYD5 112 aa11.47□□□□□ -0.57
TMEM55B-207ENST00000557041 PCP4P48539 62 aa11.47□□□□□ -0.57
TMEM55B-207ENST00000557041 A0A0J9YX75 114 aa11.46□□□□□ -0.57
TMEM55B-207ENST00000557041 PLNP26678 52 aa11.46□□□□□ -0.57
TMEM55B-207ENST00000557041 PROK1P58294 105 aa11.46□□□□□ -0.57
TMEM55B-207ENST00000557041 AMTNQ6UX39 209 aa11.46□□□□□ -0.58
TMEM55B-207ENST00000557041 ZNF575Q86XF7 245 aa11.46□□□□□ -0.58
TMEM55B-207ENST00000557041 PPP1R17O96001 155 aa11.45□□□□□ -0.58
TMEM55B-207ENST00000557041 ELANEP08246 267 aa11.45□□□□□ -0.58
TMEM55B-207ENST00000557041 Q1RN00 199 aa11.45□□□□□ -0.58
TMEM55B-207ENST00000557041 COX8CQ7Z4L0 72 aa11.45□□□□□ -0.58
TMEM55B-207ENST00000557041 GCN1Q92616 2671 aaKnown RBP11.45□□□□□ -0.58
TMEM55B-207ENST00000557041 DLX4Q92988 240 aaPredicted RBP11.45□□□□□ -0.58
TMEM55B-207ENST00000557041 PEMTQ9UBM1 199 aa11.45□□□□□ -0.58
TMEM55B-207ENST00000557041 A0A0U1RRA0 63 aa11.45□□□□□ -0.58
TMEM55B-207ENST00000557041 ADARB2-AS1A8MUL3 147 aa11.45□□□□□ -0.58
TMEM55B-207ENST00000557041 LINC01619G3V211 115 aa11.45□□□□□ -0.58
TMEM55B-207ENST00000557041 VCX2Q9H322 139 aa11.45□□□□□ -0.58
TMEM55B-207ENST00000557041 MRPL16Q9NX20 251 aaKnown RBP11.45□□□□□ -0.58
TMEM55B-207ENST00000557041 SOCS3O14543 225 aa11.44□□□□□ -0.58
TMEM55B-207ENST00000557041 SRSF2Q01130 221 aaKnown RBP11.44□□□□□ -0.58
TMEM55B-207ENST00000557041 CFHR3Q02985 330 aa11.44□□□□□ -0.58
TMEM55B-207ENST00000557041 STHQ8IWL8 128 aa11.44□□□□□ -0.58
TMEM55B-207ENST00000557041 MUC4Q99102 2169 aa11.44□□□□□ -0.58
TMEM55B-207ENST00000557041 J3QLI3 93 aa11.44□□□□□ -0.58
TMEM55B-207ENST00000557041 RPL35AP18077 110 aaKnown RBP11.44□□□□□ -0.58
TMEM55B-207ENST00000557041 NPC2P61916 151 aa11.44□□□□□ -0.58
TMEM55B-207ENST00000557041 LGALS3P17931 250 aaKnown RBP11.44□□□□□ -0.58
TMEM55B-207ENST00000557041 CEMP1Q6PRD7 247 aaPredicted RBP11.44□□□□□ -0.58
TMEM55B-207ENST00000557041 K7EMT4 169 aa11.43□□□□□ -0.58
TMEM55B-207ENST00000557041 HLA-DRB4P13762 266 aa11.43□□□□□ -0.58
TMEM55B-207ENST00000557041 BAALCQ8WXS3 180 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms