RNA–Protein interactions for RNA: ENST00000557024.1

SYNE2-224, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 998 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-224ENST00000557024 RPL23P62829 140 aaKnown RBP6.4□□□□□ -1.38
SYNE2-224ENST00000557024 PNRC1Q12796 327 aaPredicted RBP6.4□□□□□ -1.38
SYNE2-224ENST00000557024 OR5I1Q13606 314 aa6.4□□□□□ -1.38
SYNE2-224ENST00000557024 GFI1BQ5VTD9 330 aa6.4□□□□□ -1.38
SYNE2-224ENST00000557024 Q6AWC8 147 aa6.4□□□□□ -1.38
SYNE2-224ENST00000557024 TMEM256Q8N2U0 113 aa6.4□□□□□ -1.38
SYNE2-224ENST00000557024 C15orf54Q8N8G6 183 aa6.4□□□□□ -1.38
SYNE2-224ENST00000557024 UPK3BQ9BT76 320 aa6.4□□□□□ -1.38
SYNE2-224ENST00000557024 TRBV20OR9-2A0A075B6H5 130 aa6.39□□□□□ -1.39
SYNE2-224ENST00000557024 TRAV26-1A0A087WT03 109 aa6.39□□□□□ -1.39
SYNE2-224ENST00000557024 GATCO43716 136 aaKnown RBP6.39□□□□□ -1.39
SYNE2-224ENST00000557024 SH2D1AO60880 128 aa6.39□□□□□ -1.39
SYNE2-224ENST00000557024 IGLV2-8P01709 118 aa6.39□□□□□ -1.39
SYNE2-224ENST00000557024 P01737 135 aa6.39□□□□□ -1.39
SYNE2-224ENST00000557024 APOC3P02656 99 aa6.39□□□□□ -1.39
SYNE2-224ENST00000557024 DNAH10OSP0CZ25 163 aa6.39□□□□□ -1.39
SYNE2-224ENST00000557024 AZU1P20160 251 aa6.39□□□□□ -1.39
SYNE2-224ENST00000557024 ESRGQ1W209 222 aa6.39□□□□□ -1.39
SYNE2-224ENST00000557024 MUC21Q5SSG8 566 aa6.39□□□□□ -1.39
SYNE2-224ENST00000557024 IBA57Q5T440 356 aaKnown RBP6.39□□□□□ -1.39
SYNE2-224ENST00000557024 PRR9Q5T870 116 aa6.39□□□□□ -1.39
SYNE2-224ENST00000557024 FAM159AQ6UWV7 190 aa6.39□□□□□ -1.39
SYNE2-224ENST00000557024 LINC01551Q86U37 167 aa6.39□□□□□ -1.39
SYNE2-224ENST00000557024 KCNS1Q96KK3 526 aa6.39□□□□□ -1.39
SYNE2-224ENST00000557024 MLST8Q9BVC4 326 aa6.39□□□□□ -1.39
SYNE2-224ENST00000557024 MRPS16Q9Y3D3 137 aaKnown RBP6.39□□□□□ -1.39
SYNE2-224ENST00000557024 IGHV1OR15-1A0A075B7D0 117 aa6.38□□□□□ -1.39
SYNE2-224ENST00000557024 A0A0J9YY99 117 aa6.38□□□□□ -1.39
SYNE2-224ENST00000557024 XKRY2A2RUG3 117 aa6.38□□□□□ -1.39
SYNE2-224ENST00000557024 H7BYZ3 331 aa6.38□□□□□ -1.39
SYNE2-224ENST00000557024 CRXO43186 299 aaPredicted RBP6.38□□□□□ -1.39
SYNE2-224ENST00000557024 SNAPINO95295 136 aa6.38□□□□□ -1.39
SYNE2-224ENST00000557024 ADCYAP1P18509 176 aa6.38□□□□□ -1.39
SYNE2-224ENST00000557024 ZNF80P51504 273 aaPredicted RBP6.38□□□□□ -1.39
SYNE2-224ENST00000557024 SERTAD4-AS1Q5TG53 156 aa6.38□□□□□ -1.39
SYNE2-224ENST00000557024 COX8CQ7Z4L0 72 aa6.38□□□□□ -1.39
SYNE2-224ENST00000557024 OR2D3Q8NGH3 330 aa6.38□□□□□ -1.39
SYNE2-224ENST00000557024 OR10G8Q8NGN5 311 aa6.38□□□□□ -1.39
SYNE2-224ENST00000557024 PYGO2Q9BRQ0 406 aa6.38□□□□□ -1.39
SYNE2-224ENST00000557024 RNASE7Q9H1E1 156 aaKnown RBP6.38□□□□□ -1.39
SYNE2-224ENST00000557024 TRGV11A0A075B6L2 103 aa6.37□□□□□ -1.39
SYNE2-224ENST00000557024 TMSB15BA0A087X1C1 80 aa6.37□□□□□ -1.39
SYNE2-224ENST00000557024 KRTAP29-1A8MX34 341 aaPredicted RBP6.37□□□□□ -1.39
SYNE2-224ENST00000557024 B4DEV8 164 aa6.37□□□□□ -1.39
SYNE2-224ENST00000557024 K7EN84 100 aa6.37□□□□□ -1.39
SYNE2-224ENST00000557024 PPP1R2P9O14990 202 aa6.37□□□□□ -1.39
SYNE2-224ENST00000557024 ZNF324O75467 553 aaPredicted RBP6.37□□□□□ -1.39
SYNE2-224ENST00000557024 MT-ND4LP03901 98 aa6.37□□□□□ -1.39
SYNE2-224ENST00000557024 S100A4P26447 101 aaKnown RBP6.37□□□□□ -1.39
SYNE2-224ENST00000557024 RPS20P60866 119 aaKnown RBP6.37□□□□□ -1.39
SYNE2-224ENST00000557024 ANXA2RQ3ZCQ2 193 aa6.37□□□□□ -1.39
SYNE2-224ENST00000557024 SVBPQ8N300 66 aa6.37□□□□□ -1.39
SYNE2-224ENST00000557024 ISOC2Q96AB3 205 aa6.37□□□□□ -1.39
SYNE2-224ENST00000557024 SFRP2Q96HF1 295 aa6.37□□□□□ -1.39
SYNE2-224ENST00000557024 OSTCQ9NRP0 149 aa6.37□□□□□ -1.39
SYNE2-224ENST00000557024 CARHSP1Q9Y2V2 147 aaKnown RBP6.37□□□□□ -1.39
SYNE2-224ENST00000557024 TNFRSF18Q9Y5U5 241 aa6.37□□□□□ -1.39
SYNE2-224ENST00000557024 HMCN2Q8NDA2 5059 aa6.36□□□□□ -1.39
SYNE2-224ENST00000557024 A0A087WTM6 91 aa6.36□□□□□ -1.39
SYNE2-224ENST00000557024 C19orf71A6NCJ1 209 aa6.36□□□□□ -1.39
SYNE2-224ENST00000557024 A8MWL6 223 aa6.36□□□□□ -1.39
SYNE2-224ENST00000557024 GCSHP23434 173 aa6.36□□□□□ -1.39
SYNE2-224ENST00000557024 CRIP1P50238 77 aa6.36□□□□□ -1.39
SYNE2-224ENST00000557024 C10orf91Q5T1B1 145 aa6.36□□□□□ -1.39
SYNE2-224ENST00000557024 FAM231DQ6ZW35 169 aa6.36□□□□□ -1.39
SYNE2-224ENST00000557024 RPP21Q9H633 154 aaKnown RBP6.36□□□□□ -1.39
SYNE2-224ENST00000557024 NOP10Q9NPE3 64 aaKnown RBP6.36□□□□□ -1.39
SYNE2-224ENST00000557024 RPS10P5Q9NQ39 176 aa6.36□□□□□ -1.39
SYNE2-224ENST00000557024 SNURFLB1AK76 121 aa6.35□□□□□ -1.39
SYNE2-224ENST00000557024 S100A1P23297 94 aa6.35□□□□□ -1.39
SYNE2-224ENST00000557024 ASIPP42127 132 aa6.35□□□□□ -1.39
SYNE2-224ENST00000557024 RPL19P84098 196 aaKnown RBP6.35□□□□□ -1.39
SYNE2-224ENST00000557024 ZNF415Q09FC8 603 aa6.35□□□□□ -1.39
SYNE2-224ENST00000557024 Q6ZQT7 251 aa6.35□□□□□ -1.39
SYNE2-224ENST00000557024 C16orf74Q96GX8 76 aa6.35□□□□□ -1.39
SYNE2-224ENST00000557024 TIMM8BQ9Y5J9 83 aaPredicted RBP6.35□□□□□ -1.39
SYNE2-224ENST00000557024 IGKV3D-20A0A0C4DH25 116 aa6.34□□□□□ -1.39
SYNE2-224ENST00000557024 GRIFINA4D1Z8 144 aa6.34□□□□□ -1.39
SYNE2-224ENST00000557024 GNRH2O43555 120 aa6.34□□□□□ -1.39
SYNE2-224ENST00000557024 TYMSP04818 313 aa6.34□□□□□ -1.39
SYNE2-224ENST00000557024 HOXA5P20719 270 aa6.34□□□□□ -1.39
SYNE2-224ENST00000557024 RHEBQ15382 184 aa6.34□□□□□ -1.39
SYNE2-224ENST00000557024 ZNF493Q6ZR52 646 aa6.34□□□□□ -1.39
SYNE2-224ENST00000557024 BORCS7Q96B45 105 aa6.34□□□□□ -1.39
SYNE2-224ENST00000557024 LINC00467Q9BRT7 94 aa6.34□□□□□ -1.39
SYNE2-224ENST00000557024 CTDSP1Q9GZU7 261 aa6.34□□□□□ -1.39
SYNE2-224ENST00000557024 C7orf77A4D0Y5 90 aa6.33□□□□□ -1.4
SYNE2-224ENST00000557024 B5MCH6 92 aa6.33□□□□□ -1.4
SYNE2-224ENST00000557024 SIVA1O15304 175 aa6.33□□□□□ -1.4
SYNE2-224ENST00000557024 ATP6V1G1O75348 118 aa6.33□□□□□ -1.4
SYNE2-224ENST00000557024 CXCL1P09341 107 aa6.33□□□□□ -1.4
SYNE2-224ENST00000557024 TDRG1Q3Y452 100 aa6.33□□□□□ -1.4
SYNE2-224ENST00000557024 TMEM263Q8WUH6 116 aaKnown RBP6.33□□□□□ -1.4
SYNE2-224ENST00000557024 TPPP3Q9BW30 176 aa6.33□□□□□ -1.4
SYNE2-224ENST00000557024 C11orf21Q9P2W6 132 aa6.33□□□□□ -1.4
SYNE2-224ENST00000557024 TP53TG3Q9ULZ0 132 aa6.33□□□□□ -1.4
SYNE2-224ENST00000557024 GAGE12BA1L429 117 aa6.32□□□□□ -1.4
SYNE2-224ENST00000557024 H3BVH4 76 aa6.32□□□□□ -1.4
SYNE2-224ENST00000557024 GAGE7O76087 117 aa6.32□□□□□ -1.4
SYNE2-224ENST00000557024 NXPH4O95158 308 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms