RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 LINC01619G3V211 115 aa4.01□□□□□ -1.77
GPHN-213ENST00000556501 DUSP14O95147 198 aaKnown RBP4.01□□□□□ -1.77
GPHN-213ENST00000556501 PRB1P04280 392 aa4.01□□□□□ -1.77
GPHN-213ENST00000556501 CD7P09564 240 aa4.01□□□□□ -1.77
GPHN-213ENST00000556501 HOXD3P31249 432 aaPredicted RBP4.01□□□□□ -1.77
GPHN-213ENST00000556501 SYNJ2BPP57105 145 aa4.01□□□□□ -1.77
GPHN-213ENST00000556501 AMMECR1LQ6DCA0 310 aa4.01□□□□□ -1.77
GPHN-213ENST00000556501 SUMO4Q6EEV6 95 aa4.01□□□□□ -1.77
GPHN-213ENST00000556501 AMTNQ6UX39 209 aa4.01□□□□□ -1.77
GPHN-213ENST00000556501 C2orf66Q6UXQ4 117 aa4.01□□□□□ -1.77
GPHN-213ENST00000556501 FOXI2Q6ZQN5 318 aa4.01□□□□□ -1.77
GPHN-213ENST00000556501 ERASQ7Z444 233 aa4.01□□□□□ -1.77
GPHN-213ENST00000556501 GTSCR1Q86UQ5 136 aa4.01□□□□□ -1.77
GPHN-213ENST00000556501 NEXN-AS1Q8NBZ9 246 aa4.01□□□□□ -1.77
GPHN-213ENST00000556501 MAPK1IP1LQ8NDC0 245 aa4.01□□□□□ -1.77
GPHN-213ENST00000556501 BBC3Q96PG8 261 aaPredicted RBP4.01□□□□□ -1.77
GPHN-213ENST00000556501 TTTY13Q9BZ97 58 aa4.01□□□□□ -1.77
GPHN-213ENST00000556501 CSTL1Q9H114 145 aa4.01□□□□□ -1.77
GPHN-213ENST00000556501 CYSLTR1Q9Y271 337 aa4.01□□□□□ -1.77
GPHN-213ENST00000556501 CHTOPQ9Y3Y2 248 aaKnown RBP4.01□□□□□ -1.77
GPHN-213ENST00000556501 SELENOKQ9Y6D0 94 aa4.01□□□□□ -1.77
GPHN-213ENST00000556501 COL12A1Q99715 3063 aa4.01□□□□□ -1.77
GPHN-213ENST00000556501 TRGV11A0A075B6L2 103 aa4□□□□□ -1.77
GPHN-213ENST00000556501 TRBV25-1A0A075B6N4 114 aa4□□□□□ -1.77
GPHN-213ENST00000556501 IGHV1OR15-1A0A075B7D0 117 aa4□□□□□ -1.77
GPHN-213ENST00000556501 TRAV2A0A0B4J234 112 aa4□□□□□ -1.77
GPHN-213ENST00000556501 HOXA3O43365 443 aaPredicted RBP4□□□□□ -1.77
GPHN-213ENST00000556501 CDKN1BP46527 198 aa4□□□□□ -1.77
GPHN-213ENST00000556501 POLR2KP53803 58 aaKnown RBP4□□□□□ -1.77
GPHN-213ENST00000556501 RIPPLY3P57055 190 aa4□□□□□ -1.77
GPHN-213ENST00000556501 TAL2Q16559 108 aa4□□□□□ -1.77
GPHN-213ENST00000556501 DEFB113Q30KQ7 82 aa4□□□□□ -1.77
GPHN-213ENST00000556501 Q5PR19 223 aa4□□□□□ -1.77
GPHN-213ENST00000556501 UFSP1Q6NVU6 142 aa4□□□□□ -1.77
GPHN-213ENST00000556501 ZNF843Q8N446 348 aa4□□□□□ -1.77
GPHN-213ENST00000556501 SYT8Q8NBV8 401 aa4□□□□□ -1.77
GPHN-213ENST00000556501 BAALCQ8WXS3 180 aa4□□□□□ -1.77
GPHN-213ENST00000556501 JPT2Q9H910 190 aa4□□□□□ -1.77
GPHN-213ENST00000556501 TMEM160Q9NX00 188 aa4□□□□□ -1.77
GPHN-213ENST00000556501 POLQO75417 2590 aa4□□□□□ -1.77
GPHN-213ENST00000556501 A0A087WWL8 130 aa3.99□□□□□ -1.77
GPHN-213ENST00000556501 TRBV27A0A0K0K1C4 114 aa3.99□□□□□ -1.77
GPHN-213ENST00000556501 SDHAF1A6NFY7 115 aa3.99□□□□□ -1.77
GPHN-213ENST00000556501 PRSS29PA6NIE9 313 aa3.99□□□□□ -1.77
GPHN-213ENST00000556501 OR11H12B2RN74 326 aa3.99□□□□□ -1.77
GPHN-213ENST00000556501 K7EP34 96 aa3.99□□□□□ -1.77
GPHN-213ENST00000556501 VCYO14598 125 aa3.99□□□□□ -1.77
GPHN-213ENST00000556501 FXYD2P54710 66 aa3.99□□□□□ -1.77
GPHN-213ENST00000556501 KRTAP10-9P60411 292 aa3.99□□□□□ -1.77
GPHN-213ENST00000556501 RHOHQ15669 191 aa3.99□□□□□ -1.77
GPHN-213ENST00000556501 SPINK13Q1W4C9 94 aa3.99□□□□□ -1.77
GPHN-213ENST00000556501 CFAP161Q6P656 301 aa3.99□□□□□ -1.77
GPHN-213ENST00000556501 ZFP2Q6ZN57 461 aa3.99□□□□□ -1.77
GPHN-213ENST00000556501 GTF2H5Q6ZYL4 71 aa3.99□□□□□ -1.77
GPHN-213ENST00000556501 NEGR1Q7Z3B1 354 aa3.99□□□□□ -1.77
GPHN-213ENST00000556501 MAPKAPK5-AS1Q8N8E1 139 aa3.99□□□□□ -1.77
GPHN-213ENST00000556501 OR11H1Q8NG94 326 aa3.99□□□□□ -1.77
GPHN-213ENST00000556501 OR11H2Q8NH07 326 aa3.99□□□□□ -1.77
GPHN-213ENST00000556501 RNASE8Q8TDE3 154 aaKnown RBP3.99□□□□□ -1.77
GPHN-213ENST00000556501 C4orf3Q8WVX3 66 aa3.99□□□□□ -1.77
GPHN-213ENST00000556501 TMEM141Q96I45 108 aa3.99□□□□□ -1.77
GPHN-213ENST00000556501 TIMM17AQ99595 171 aa3.99□□□□□ -1.77
GPHN-213ENST00000556501 TM2D2Q9BX73 214 aa3.99□□□□□ -1.77
GPHN-213ENST00000556501 EDA2RQ9HAV5 297 aa3.99□□□□□ -1.77
GPHN-213ENST00000556501 TP53TG1Q9Y2A0 90 aa3.99□□□□□ -1.77
GPHN-213ENST00000556501 ZNF256Q9Y2P7 627 aaPredicted RBP3.99□□□□□ -1.77
GPHN-213ENST00000556501 NAV2Q8IVL1 2488 aa3.99□□□□□ -1.77
GPHN-213ENST00000556501 UNC79Q9P2D8 2635 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 HECTD1Q9ULT8 2610 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 ITPR2Q14571 2701 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 IGLV4-69A0A075B6H9 119 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 TRBV7-3A0A075B6L6 115 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 TRAV12-2A0A075B6T6 113 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 A0A1W2PPM0 123 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 IGIPA6NJ69 53 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 E9PLD3 99 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 F5H697 171 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 H3BUT2 72 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 M0QY20 66 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 TSHBP01222 138 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 IGKV3-20P01619 116 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 CRYGDP07320 174 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 SMIM13P0DJ93 91 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 GCSHP23434 173 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 SLURP1P55000 103 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 RBX1P62877 108 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 ZNF56Q15929 161 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 NSUN5P1Q3KNT7 163 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 TCTEX1D4Q5JR98 221 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 PAPPA-AS1Q5QFB9 102 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 MORN3Q6PF18 240 aaPredicted RBP3.98□□□□□ -1.77
GPHN-213ENST00000556501 TRPT1Q86TN4 253 aaKnown RBP3.98□□□□□ -1.77
GPHN-213ENST00000556501 KRTAP1-3Q8IUG1 177 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 CEND1Q8N111 149 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 TMEM86BQ8N661 226 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 OR5A1Q8NGJ0 315 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 PHLDA1Q8WV24 401 aaPredicted RBP3.98□□□□□ -1.77
GPHN-213ENST00000556501 KIR2DL4Q99706 377 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 MDFICQ9P1T7 246 aa3.98□□□□□ -1.77
GPHN-213ENST00000556501 CELSR2Q9HCU4 2923 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms