RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 E7EUB6 86 aa4.47□□□□□ -1.69
TDP1-215ENST00000556498 GNRH2O43555 120 aa4.47□□□□□ -1.69
TDP1-215ENST00000556498 ZNF137PP52743 207 aa4.47□□□□□ -1.69
TDP1-215ENST00000556498 B3GALT5-AS1P59052 145 aa4.47□□□□□ -1.69
TDP1-215ENST00000556498 LMO4P61968 165 aa4.47□□□□□ -1.69
TDP1-215ENST00000556498 DAZAP2Q15038 168 aaPredicted RBP4.47□□□□□ -1.69
TDP1-215ENST00000556498 PATE2Q6UY27 113 aa4.47□□□□□ -1.69
TDP1-215ENST00000556498 FOXL2NBQ6ZUU3 175 aa4.47□□□□□ -1.69
TDP1-215ENST00000556498 IMMP1LQ96LU5 166 aa4.47□□□□□ -1.69
TDP1-215ENST00000556498 SCGB3A1Q96QR1 104 aa4.47□□□□□ -1.69
TDP1-215ENST00000556498 KRTAP4-9Q9BYQ8 210 aa4.47□□□□□ -1.69
TDP1-215ENST00000556498 BPESC1Q9GZL8 116 aa4.47□□□□□ -1.69
TDP1-215ENST00000556498 ARHGEF17Q96PE2 2063 aaPredicted RBP4.47□□□□□ -1.69
TDP1-215ENST00000556498 PTPRSQ13332 1948 aa4.46□□□□□ -1.69
TDP1-215ENST00000556498 NUMA1Q14980 2115 aa4.46□□□□□ -1.69
TDP1-215ENST00000556498 TRIP12Q14669 1992 aaPredicted RBP4.46□□□□□ -1.7
TDP1-215ENST00000556498 hDV103S1A0JD37 113 aa4.46□□□□□ -1.7
TDP1-215ENST00000556498 C11orf86A6NJI1 115 aa4.46□□□□□ -1.7
TDP1-215ENST00000556498 D6R8Y8 96 aa4.46□□□□□ -1.7
TDP1-215ENST00000556498 C3orf84H3BNL1 204 aa4.46□□□□□ -1.7
TDP1-215ENST00000556498 CCL5P13501 91 aa4.46□□□□□ -1.7
TDP1-215ENST00000556498 SPINT3P49223 89 aa4.46□□□□□ -1.7
TDP1-215ENST00000556498 IGFL3Q6UXB1 125 aa4.46□□□□□ -1.7
TDP1-215ENST00000556498 RMI2Q96E14 147 aa4.46□□□□□ -1.7
TDP1-215ENST00000556498 NDUFA12Q9UI09 145 aa4.46□□□□□ -1.7
TDP1-215ENST00000556498 LCTP09848 1927 aa4.46□□□□□ -1.7
TDP1-215ENST00000556498 PLXNB3Q9ULL4 1909 aa4.45□□□□□ -1.7
TDP1-215ENST00000556498 PLXNB2O15031 1838 aa4.45□□□□□ -1.7
TDP1-215ENST00000556498 NRACQ8N912 160 aa4.45□□□□□ -1.7
TDP1-215ENST00000556498 TRAV22A0A0B4J277 110 aa4.44□□□□□ -1.7
TDP1-215ENST00000556498 IGKV3D-7A0A0C4DH55 119 aa4.44□□□□□ -1.7
TDP1-215ENST00000556498 HCG22E2RYF7 251 aa4.44□□□□□ -1.7
TDP1-215ENST00000556498 NDUFA3O95167 84 aa4.44□□□□□ -1.7
TDP1-215ENST00000556498 BAALC-AS2P0C853 105 aa4.44□□□□□ -1.7
TDP1-215ENST00000556498 RPS21P63220 83 aaKnown RBP4.44□□□□□ -1.7
TDP1-215ENST00000556498 ZNF706Q9Y5V0 76 aaPredicted RBP4.44□□□□□ -1.7
TDP1-215ENST00000556498 SMCHD1A6NHR9 2005 aa4.44□□□□□ -1.7
TDP1-215ENST00000556498 NCOA6Q14686 2063 aaPredicted RBP4.44□□□□□ -1.7
TDP1-215ENST00000556498 TRPM6Q9BX84 2022 aa4.43□□□□□ -1.7
TDP1-215ENST00000556498 IGHV1-45A0A0A0MS14 117 aa4.43□□□□□ -1.7
TDP1-215ENST00000556498 A0A0G2JRQ6 117 aa4.43□□□□□ -1.7
TDP1-215ENST00000556498 SOCS3O14543 225 aa4.43□□□□□ -1.7
TDP1-215ENST00000556498 IGKV1-16P04430 117 aa4.43□□□□□ -1.7
TDP1-215ENST00000556498 CD52P31358 61 aa4.43□□□□□ -1.7
TDP1-215ENST00000556498 RPL27AP46776 148 aaKnown RBP4.43□□□□□ -1.7
TDP1-215ENST00000556498 Q6ZRP5 223 aa4.43□□□□□ -1.7
TDP1-215ENST00000556498 Q6ZTC4 211 aa4.43□□□□□ -1.7
TDP1-215ENST00000556498 MIR17HGQ75NE6 70 aa4.43□□□□□ -1.7
TDP1-215ENST00000556498 CHCHD10Q8WYQ3 142 aaPredicted RBP4.43□□□□□ -1.7
TDP1-215ENST00000556498 OBSCN-AS1Q96MR7 158 aa4.43□□□□□ -1.7
TDP1-215ENST00000556498 CDC42SE1Q9NRR8 79 aa4.43□□□□□ -1.7
TDP1-215ENST00000556498 KIAA1549LQ6ZVL6 1849 aa4.43□□□□□ -1.7
TDP1-215ENST00000556498 KIAA2026Q5HYC2 2103 aa4.43□□□□□ -1.7
TDP1-215ENST00000556498 SCN3AQ9NY46 2000 aa4.43□□□□□ -1.7
TDP1-215ENST00000556498 NUP214P35658 2090 aaPredicted RBP4.42□□□□□ -1.7
TDP1-215ENST00000556498 ARHGAP21Q5T5U3 1957 aa4.42□□□□□ -1.7
TDP1-215ENST00000556498 TRAV23DV6A0A075B6W5 121 aa4.42□□□□□ -1.7
TDP1-215ENST00000556498 TRBV6-6A0A0A6YYG2 114 aa4.42□□□□□ -1.7
TDP1-215ENST00000556498 IGHV5-51A0A0C4DH38 117 aa4.42□□□□□ -1.7
TDP1-215ENST00000556498 C16orf90A8MZG2 172 aa4.42□□□□□ -1.7
TDP1-215ENST00000556498 H3BSH0 61 aa4.42□□□□□ -1.7
TDP1-215ENST00000556498 M0R3E3 92 aa4.42□□□□□ -1.7
TDP1-215ENST00000556498 CDK2AP2O75956 126 aa4.42□□□□□ -1.7
TDP1-215ENST00000556498 P0C879 139 aa4.42□□□□□ -1.7
TDP1-215ENST00000556498 RPL28P46779 137 aaKnown RBP4.42□□□□□ -1.7
TDP1-215ENST00000556498 FAM229BQ4G0N7 80 aa4.42□□□□□ -1.7
TDP1-215ENST00000556498 C9orf116Q5BN46 136 aaPredicted RBP4.42□□□□□ -1.7
TDP1-215ENST00000556498 LINC00242Q5T6M2 205 aa4.42□□□□□ -1.7
TDP1-215ENST00000556498 RALGAPA1Q6GYQ0 2036 aa4.42□□□□□ -1.7
TDP1-215ENST00000556498 Q8IYB0 196 aa4.42□□□□□ -1.7
TDP1-215ENST00000556498 LINC01560Q8TB33 94 aa4.42□□□□□ -1.7
TDP1-215ENST00000556498 CCL28Q9NRJ3 127 aa4.42□□□□□ -1.7
TDP1-215ENST00000556498 MGAMO43451 1857 aa4.41□□□□□ -1.7
TDP1-215ENST00000556498 IGHV3OR16-13A0A075B7E8 117 aa4.41□□□□□ -1.7
TDP1-215ENST00000556498 A0A087WVE0 104 aa4.41□□□□□ -1.7
TDP1-215ENST00000556498 A0A0J9YXY3 114 aa4.41□□□□□ -1.7
TDP1-215ENST00000556498 H7C2G1 150 aa4.41□□□□□ -1.7
TDP1-215ENST00000556498 IGLV3-25P01717 112 aa4.41□□□□□ -1.7
TDP1-215ENST00000556498 MUSTN1Q8IVN3 82 aa4.41□□□□□ -1.7
TDP1-215ENST00000556498 PRSS33Q8NF86 280 aa4.41□□□□□ -1.7
TDP1-215ENST00000556498 SPTSSBQ8NFR3 76 aa4.41□□□□□ -1.7
TDP1-215ENST00000556498 UBL5Q9BZL1 73 aa4.41□□□□□ -1.7
TDP1-215ENST00000556498 ZNF702PQ9H963 129 aa4.41□□□□□ -1.7
TDP1-215ENST00000556498 TMEM14BQ9NUH8 114 aa4.41□□□□□ -1.7
TDP1-215ENST00000556498 MYO16Q9Y6X6 1858 aa4.41□□□□□ -1.7
TDP1-215ENST00000556498 PCDH15Q96QU1 1955 aa4.4□□□□□ -1.7
TDP1-215ENST00000556498 IGLV3-16A0A075B6K0 115 aa4.4□□□□□ -1.71
TDP1-215ENST00000556498 TRBV6-8A0A0A6YYG3 113 aa4.4□□□□□ -1.71
TDP1-215ENST00000556498 IGKV1-8A0A0C4DH67 115 aa4.4□□□□□ -1.71
TDP1-215ENST00000556498 TRBV7-4A0A0J9YYF1 115 aa4.4□□□□□ -1.71
TDP1-215ENST00000556498 I3L3M4 83 aa4.4□□□□□ -1.71
TDP1-215ENST00000556498 LEPROTO15243 131 aa4.4□□□□□ -1.71
TDP1-215ENST00000556498 IGKV1-39P01597 117 aa4.4□□□□□ -1.71
TDP1-215ENST00000556498 IGHV3-13P01766 116 aa4.4□□□□□ -1.71
TDP1-215ENST00000556498 IGKV1D-39P04432 117 aa4.4□□□□□ -1.71
TDP1-215ENST00000556498 ARMS2P0C7Q2 107 aa4.4□□□□□ -1.71
TDP1-215ENST00000556498 CD24P25063 80 aa4.4□□□□□ -1.71
TDP1-215ENST00000556498 C18orf65Q6ZTR6 163 aa4.4□□□□□ -1.71
TDP1-215ENST00000556498 TMEM254Q8TBM7 123 aa4.4□□□□□ -1.71
TDP1-215ENST00000556498 XAGE1AQ9HD64 81 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms