RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 BORCS7Q96B45 105 aa3.74□□□□□ -1.81
SRP54-211ENST00000556445 OCR1Q9BZK8 76 aa3.74□□□□□ -1.81
SRP54-211ENST00000556445 RNASE7Q9H1E1 156 aaKnown RBP3.74□□□□□ -1.81
SRP54-211ENST00000556445 LENEPQ9Y5L5 61 aa3.74□□□□□ -1.81
SRP54-211ENST00000556445 ZNF462Q96JM2 2506 aa3.74□□□□□ -1.81
SRP54-211ENST00000556445 OR4C46A6NHA9 309 aa3.73□□□□□ -1.81
SRP54-211ENST00000556445 PHOX2AO14813 284 aa3.73□□□□□ -1.81
SRP54-211ENST00000556445 PSMB8P28062 276 aa3.73□□□□□ -1.81
SRP54-211ENST00000556445 FOXA3P55318 350 aaPredicted RBP3.73□□□□□ -1.81
SRP54-211ENST00000556445 KRTAP10-5P60370 271 aa3.73□□□□□ -1.81
SRP54-211ENST00000556445 BLCAPP62952 87 aa3.73□□□□□ -1.81
SRP54-211ENST00000556445 DNLZQ5SXM8 178 aa3.73□□□□□ -1.81
SRP54-211ENST00000556445 REG3GQ6UW15 175 aa3.73□□□□□ -1.81
SRP54-211ENST00000556445 NEGR1Q7Z3B1 354 aa3.73□□□□□ -1.81
SRP54-211ENST00000556445 GPHB5Q86YW7 130 aa3.73□□□□□ -1.81
SRP54-211ENST00000556445 OR4X2Q8NGF9 303 aa3.73□□□□□ -1.81
SRP54-211ENST00000556445 LINC00479Q96M42 142 aa3.73□□□□□ -1.81
SRP54-211ENST00000556445 DAZ1Q9NQZ3 744 aaKnown RBP3.73□□□□□ -1.81
SRP54-211ENST00000556445 USP9XQ93008 2570 aaPredicted RBP3.73□□□□□ -1.81
SRP54-211ENST00000556445 CR1P17927 2039 aa3.73□□□□□ -1.81
SRP54-211ENST00000556445 CFAP47Q6ZTR5 3102 aa3.73□□□□□ -1.81
SRP54-211ENST00000556445 MYO18BQ8IUG5 2567 aa3.72□□□□□ -1.81
SRP54-211ENST00000556445 TRAV9-2A0A087WT02 112 aa3.72□□□□□ -1.81
SRP54-211ENST00000556445 TRAV8-6A0A0B4J262 113 aa3.72□□□□□ -1.81
SRP54-211ENST00000556445 IGHV3-35A0A0C4DH35 117 aa3.72□□□□□ -1.81
SRP54-211ENST00000556445 IGHV7-4-1A0A0J9YVY3 117 aa3.72□□□□□ -1.81
SRP54-211ENST00000556445 CLPSL1A2RUU4 121 aa3.72□□□□□ -1.81
SRP54-211ENST00000556445 FABP5P3A8MUU1 101 aa3.72□□□□□ -1.81
SRP54-211ENST00000556445 HIGD1CA8MV81 97 aa3.72□□□□□ -1.81
SRP54-211ENST00000556445 OVOL1O14753 267 aa3.72□□□□□ -1.81
SRP54-211ENST00000556445 APCSP02743 223 aa3.72□□□□□ -1.81
SRP54-211ENST00000556445 CRISP2P16562 243 aa3.72□□□□□ -1.81
SRP54-211ENST00000556445 TCTAP57738 103 aa3.72□□□□□ -1.81
SRP54-211ENST00000556445 HBBP68871 147 aa3.72□□□□□ -1.81
SRP54-211ENST00000556445 Q0VG73 95 aa3.72□□□□□ -1.81
SRP54-211ENST00000556445 TMEM78Q5T7P6 136 aa3.72□□□□□ -1.81
SRP54-211ENST00000556445 LCN12Q6JVE5 192 aa3.72□□□□□ -1.81
SRP54-211ENST00000556445 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.72□□□□□ -1.81
SRP54-211ENST00000556445 HIST3H2BBQ8N257 126 aa3.72□□□□□ -1.81
SRP54-211ENST00000556445 Q8N2B8 174 aa3.72□□□□□ -1.81
SRP54-211ENST00000556445 NKAPP1Q8N9T2 125 aa3.72□□□□□ -1.81
SRP54-211ENST00000556445 LINC00477Q96M19 166 aa3.72□□□□□ -1.81
SRP54-211ENST00000556445 LINC00527Q9UJ94 153 aa3.72□□□□□ -1.81
SRP54-211ENST00000556445 SMAD5-AS1Q9Y6J3 95 aa3.72□□□□□ -1.81
SRP54-211ENST00000556445 ITPR1Q14643 2758 aa3.72□□□□□ -1.81
SRP54-211ENST00000556445 CSPG4Q6UVK1 2322 aa3.71□□□□□ -1.82
SRP54-211ENST00000556445 HRNRQ86YZ3 2850 aaPredicted RBP3.71□□□□□ -1.82
SRP54-211ENST00000556445 ANKRD17O75179 2603 aaKnown RBP3.71□□□□□ -1.82
SRP54-211ENST00000556445 TRAV8-1A0A0A6YYK1 113 aa3.71□□□□□ -1.82
SRP54-211ENST00000556445 TRAV8-2A0A0B4J237 113 aa3.71□□□□□ -1.82
SRP54-211ENST00000556445 A0A1B0GUT8 65 aa3.71□□□□□ -1.82
SRP54-211ENST00000556445 TMEM189A5PLL7 270 aa3.71□□□□□ -1.82
SRP54-211ENST00000556445 A8MWP6 167 aa3.71□□□□□ -1.82
SRP54-211ENST00000556445 C8orf87E5RJ46 101 aa3.71□□□□□ -1.82
SRP54-211ENST00000556445 M0R3E3 92 aa3.71□□□□□ -1.82
SRP54-211ENST00000556445 LGALS9O00182 355 aa3.71□□□□□ -1.82
SRP54-211ENST00000556445 CD5LO43866 347 aa3.71□□□□□ -1.82
SRP54-211ENST00000556445 NDUFS5O43920 106 aa3.71□□□□□ -1.82
SRP54-211ENST00000556445 LGALS1P09382 135 aaKnown RBP3.71□□□□□ -1.82
SRP54-211ENST00000556445 CBLN1P23435 193 aa3.71□□□□□ -1.82
SRP54-211ENST00000556445 ZNF138P52744 262 aa3.71□□□□□ -1.82
SRP54-211ENST00000556445 HIST1H1AQ02539 215 aaPredicted RBP3.71□□□□□ -1.82
SRP54-211ENST00000556445 KIAA0087Q14695 138 aa3.71□□□□□ -1.82
SRP54-211ENST00000556445 MRPL54Q6P161 138 aaKnown RBP3.71□□□□□ -1.82
SRP54-211ENST00000556445 TMEM136Q6ZRR5 245 aa3.71□□□□□ -1.82
SRP54-211ENST00000556445 BAGE3Q86Y29 109 aa3.71□□□□□ -1.82
SRP54-211ENST00000556445 MAPK1IP1LQ8NDC0 245 aa3.71□□□□□ -1.82
SRP54-211ENST00000556445 NUP35Q8NFH5 326 aa3.71□□□□□ -1.82
SRP54-211ENST00000556445 ZC2HC1AQ96GY0 325 aa3.71□□□□□ -1.82
SRP54-211ENST00000556445 C12orf57Q99622 126 aa3.71□□□□□ -1.82
SRP54-211ENST00000556445 LITAFQ99732 161 aa3.71□□□□□ -1.82
SRP54-211ENST00000556445 ZNF702PQ9H963 129 aa3.71□□□□□ -1.82
SRP54-211ENST00000556445 BSNQ9UPA5 3926 aa3.71□□□□□ -1.82
SRP54-211ENST00000556445 IGKV2-40A0A087WW87 121 aaPredicted RBP3.7□□□□□ -1.82
SRP54-211ENST00000556445 IGHV3-16A0A0C4DH30 117 aa3.7□□□□□ -1.82
SRP54-211ENST00000556445 A0A0J9YXV3 536 aa3.7□□□□□ -1.82
SRP54-211ENST00000556445 RPL37AP8A6NKH3 93 aa3.7□□□□□ -1.82
SRP54-211ENST00000556445 F2Z2F3 143 aa3.7□□□□□ -1.82
SRP54-211ENST00000556445 IGKV2D-40P01614 121 aaPredicted RBP3.7□□□□□ -1.82
SRP54-211ENST00000556445 IGHV3-11P01762 117 aa3.7□□□□□ -1.82
SRP54-211ENST00000556445 FABP4P15090 132 aa3.7□□□□□ -1.82
SRP54-211ENST00000556445 C14orf177Q52M58 125 aa3.7□□□□□ -1.82
SRP54-211ENST00000556445 LINC00173Q6ZV60 143 aa3.7□□□□□ -1.82
SRP54-211ENST00000556445 SIGLECL1Q8N7X8 197 aa3.7□□□□□ -1.82
SRP54-211ENST00000556445 CSNK1G2-AS1Q8NCQ2 148 aa3.7□□□□□ -1.82
SRP54-211ENST00000556445 OR10D4PQ8NGN7 298 aa3.7□□□□□ -1.82
SRP54-211ENST00000556445 OR1N2Q8NGR9 330 aa3.7□□□□□ -1.82
SRP54-211ENST00000556445 OR13C6PQ8NH95 151 aa3.7□□□□□ -1.82
SRP54-211ENST00000556445 MYOZ3Q8TDC0 251 aa3.7□□□□□ -1.82
SRP54-211ENST00000556445 ZNF418Q8TF45 676 aaPredicted RBP3.7□□□□□ -1.82
SRP54-211ENST00000556445 RHPN1-AS1Q9BWJ2 59 aa3.7□□□□□ -1.82
SRP54-211ENST00000556445 DOPEY2Q9Y3R5 2298 aa3.7□□□□□ -1.82
SRP54-211ENST00000556445 ZFYVE26Q68DK2 2539 aa3.69□□□□□ -1.82
SRP54-211ENST00000556445 ADGRG4Q8IZF6 3080 aa3.69□□□□□ -1.82
SRP54-211ENST00000556445 IGLV4-3A0A075B6K6 122 aa3.69□□□□□ -1.82
SRP54-211ENST00000556445 IGHV3OR16-8A0A075B7F1 116 aa3.69□□□□□ -1.82
SRP54-211ENST00000556445 TRAV2A0A0B4J234 112 aa3.69□□□□□ -1.82
SRP54-211ENST00000556445 ZNF207O43670 478 aaKnown RBP3.69□□□□□ -1.82
SRP54-211ENST00000556445 SPINK4O60575 86 aa3.69□□□□□ -1.82
SRP54-211ENST00000556445 SH2D1AO60880 128 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms