RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 A0A1W2PPM0 123 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 LINC01549A6NIU2 74 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 K7EMI3 77 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 OVOL1O14753 267 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 ATP6V0E1O15342 81 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 SNAI2O43623 268 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 ZNF207O43670 478 aaKnown RBP3.35□□□□□ -1.87
ATXN3-241ENST00000556374 NDUFS7O75251 213 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 SMIM17P0DL12 118 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 SLC25A16P16260 332 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 EVI2AP22794 236 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 ASIPP42127 132 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 UBE2E1P51965 193 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 TCTAP57738 103 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 HERVK_113P61574 105 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 RBX1P62877 108 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 ATP5G2Q06055 141 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 ERCC8Q13216 396 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 EBI3Q14213 229 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 LAGE3Q14657 143 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 TAL2Q16559 108 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 ORMDL2Q53FV1 153 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 Q5PR19 223 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 SAMD13Q5VXD3 122 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 HIST2H2BDQ6DRA6 164 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 PRSS57Q6UWY2 283 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 CLEC19AQ6UXS0 136 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 IL17RELQ6ZVW7 336 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 DYNAPQ8N1N2 210 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 Q8N9W7 124 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 PIFOQ8TCI5 191 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 RAB37Q96AX2 223 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 VGLL1Q99990 258 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 HIGD1BQ9P298 99 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 TP73-AS1Q9UF72 201 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 RYR3Q15413 4870 aa3.35□□□□□ -1.87
ATXN3-241ENST00000556374 KMT2CQ8NEZ4 4911 aaKnown RBP3.34□□□□□ -1.87
ATXN3-241ENST00000556374 IGHV3OR16-8A0A075B7F1 116 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 A0A096LNJ9 63 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 TRAV41A0A0B4J266 112 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 IGHV3-35A0A0C4DH35 117 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 IGHV3-66A0A0C4DH42 116 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 LINC01546A6NGU7 62 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 PRSS47A8MTI9 375 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 OR11H12B2RN74 326 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-241ENST00000556374 H3BVH4 76 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 NPFFO15130 113 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 LY6HO94772 140 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 CTSGP08311 255 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 MGPP08493 103 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 FGF6P10767 208 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 HLA-DMBP28068 263 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 SAA4P35542 130 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 ARL3P36405 182 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 ZNF80P51504 273 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-241ENST00000556374 EFNA4P52798 201 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 PAX8Q06710 450 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 LOXL1Q08397 574 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-241ENST00000556374 KRTAP24-1Q3LI83 254 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 ZC2HC1BQ5TFG8 222 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 C11orf71Q6IPW1 123 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 OR11H1Q8NG94 326 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 OR11H2Q8NH07 326 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 HIST1H4GQ99525 98 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 SMIM2Q9BVW6 85 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 SIRPDQ9H106 197 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 DPH3P1Q9H4G8 78 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 TMEM160Q9NX00 188 aa3.34□□□□□ -1.87
ATXN3-241ENST00000556374 CR1P17927 2039 aa3.34□□□□□ -1.88
ATXN3-241ENST00000556374 NBEAL2Q6ZNJ1 2754 aa3.33□□□□□ -1.88
ATXN3-241ENST00000556374 TRAV12-1A0A0B4J245 112 aa3.33□□□□□ -1.88
ATXN3-241ENST00000556374 TRAV8-6A0A0B4J262 113 aa3.33□□□□□ -1.88
ATXN3-241ENST00000556374 F8VRH5 84 aa3.33□□□□□ -1.88
ATXN3-241ENST00000556374 H3BUA1 57 aa3.33□□□□□ -1.88
ATXN3-241ENST00000556374 H7C1H1 209 aa3.33□□□□□ -1.88
ATXN3-241ENST00000556374 M0R381 172 aa3.33□□□□□ -1.88
ATXN3-241ENST00000556374 BUB3O43684 328 aa3.33□□□□□ -1.88
ATXN3-241ENST00000556374 TRGV3P03979 118 aa3.33□□□□□ -1.88
ATXN3-241ENST00000556374 PRB4P10163 310 aaPredicted RBP3.33□□□□□ -1.88
ATXN3-241ENST00000556374 HOXD3P31249 432 aaPredicted RBP3.33□□□□□ -1.88
ATXN3-241ENST00000556374 FXYD7P58549 80 aa3.33□□□□□ -1.88
ATXN3-241ENST00000556374 FAM106AQ4KMX7 169 aa3.33□□□□□ -1.88
ATXN3-241ENST00000556374 PAPPA-AS1Q5QFB9 102 aa3.33□□□□□ -1.88
ATXN3-241ENST00000556374 KRTAP5-1Q6L8H4 278 aa3.33□□□□□ -1.88
ATXN3-241ENST00000556374 GTSCR1Q86UQ5 136 aa3.33□□□□□ -1.88
ATXN3-241ENST00000556374 RNF182Q8N6D2 247 aa3.33□□□□□ -1.88
ATXN3-241ENST00000556374 C5orf56Q8N8D9 126 aa3.33□□□□□ -1.88
ATXN3-241ENST00000556374 RNF185Q96GF1 192 aa3.33□□□□□ -1.88
ATXN3-241ENST00000556374 LINC00477Q96M19 166 aa3.33□□□□□ -1.88
ATXN3-241ENST00000556374 SCGB3A1Q96QR1 104 aa3.33□□□□□ -1.88
ATXN3-241ENST00000556374 NHP2Q9NX24 153 aaKnown RBP3.33□□□□□ -1.88
ATXN3-241ENST00000556374 PHLDA3Q9Y5J5 127 aa3.33□□□□□ -1.88
ATXN3-241ENST00000556374 SMAD5-AS1Q9Y6J3 95 aa3.33□□□□□ -1.88
ATXN3-241ENST00000556374 ABCA1O95477 2261 aa3.32□□□□□ -1.88
ATXN3-241ENST00000556374 PRKDCP78527 4128 aaKnown RBP3.32□□□□□ -1.88
ATXN3-241ENST00000556374 IGHV4-4A0A075B6R2 117 aa3.32□□□□□ -1.88
ATXN3-241ENST00000556374 A0A087WX48 190 aa3.32□□□□□ -1.88
ATXN3-241ENST00000556374 IGHV3-49A0A0A0MS15 119 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms